LOCUS       AF231339                1969 bp    mRNA    linear   HUM 18-SEP-2000
DEFINITION  Homo sapiens bHLH-PAS transcription factor MOP9 (MOP9) mRNA, short
            form, complete cds, alternatively spliced.
ACCESSION   AF231339
VERSION     AF231339.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1969)
  AUTHORS   Hogenesch,J.B., Gu,Y.Z., Moran,S.M., Shimomura,K., Radcliffe,L.A.,
            Takahashi,J.S. and Bradfield,C.A.
  TITLE     The basic helix-loop-helix-PAS protein MOP9 is a brain-specific
            heterodimeric partner of circadian and hypoxia factors
  JOURNAL   J. Neurosci. 20 (13), RC83 (2000)
   PUBMED   10864977
REFERENCE   2  (bases 1 to 1969)
  AUTHORS   Hogenesch,J.B., Gu,Y.-Z., Moran,S.M., Laurel,R.A., Shimomura,K.,
            Takahashi,J.S. and Bradfield,C.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-FEB-2000) McArdle Cancer Center, University of
            Wisconsin, 1400 University Avenue, Madison, WI 53706, USA
FEATURES             Location/Qualifiers
     source          1..1969
                     /db_xref="H-InvDB:HIT000074610"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="12"
                     /map="12p11.23-p11.22"
     gene            1..1969
                     /gene="MOP9"
     CDS             58..1776
                     /gene="MOP9"
                     /note="short form; alternatively spliced"
                     /codon_start=1
                     /product="bHLH-PAS transcription factor MOP9"
                     /protein_id="AAF71307.1"
                     /translation="MGSFSSHMTEFPRKRKGSDSDPSHQNPLTYLLSTRIEISASSGS
                     REAHSQTEKRRRDKMNNLIEELSAMIPQCNPMARKLDKLTVLRMAVQHLRSLKGLTNS
                     YVGSNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLTG
                     QSLFDFLHPKDVAKVKEQLSSFDISPREKLIDTKTGLQVHSNLHAGRTRVYFGSRRSF
                     FCRIKSCKISVKEEHGCLPNSKKKEHRKFYTIHCTGYLRSWPPNIVGMEEERNSKKDN
                     SNFTCLVAIGRLQPYIVPQNSGEINVKPTEFITRFAVNGKFVYVDQRATAILGYLPQE
                     LLGTSCYEYFHQDDHNNLTDKHKAVLQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTN
                     PWTKELEYIVSVNTLVLGHSEPGEASFLPCSSQSSEESSRQSCMSVPGMSTGTVLGAG
                     SIGTDIANEILDLQRLQSSSYLDDSSPTGLMKDTHTVNCRSMSNKELFPPSPSEMGEL
                     EATRQNQSTVAVHSHEPLLSDGAQLDFDALCDNDDTAMAAFMNYLEAEGGLGDPGDFS
                     DIQWTL"
BASE COUNT          623 a          379 c          409 g          558 t
ORIGIN      
        1 ccgggcaggt ctcctgtggt ttccagccgc gtgagtccag ggacaagacc aacagctatg
       61 gggtctttca gctcacacat gacagagttt ccacgaaaac gcaaaggaag tgattcagac
      121 ccatcccatc agaatcccct tacctatctt ctttcaacaa ggatagaaat atcagcctcc
      181 agtggcagca gagaagctca tagccaaact gaaaagcgga ggagagataa aatgaataac
      241 ctgattgaag aactgtctgc aatgatccct cagtgcaacc ccatggcgcg taaactggac
      301 aaacttacag ttttaagaat ggctgttcaa cacttgagat ctttaaaagg cttgacaaat
      361 tcttatgtgg gaagtaatta tagaccatca tttcttcagg ataatgagct cagacattta
      421 atccttaaga ctgcagaagg cttcttattt gtggttggat gtgaaagagg aaaaattctc
      481 ttcgtttcta agtcagtctc caaaatactt aattatgatc aggctagttt gactggacaa
      541 agcttatttg acttcttaca tccaaaagat gttgccaaag taaaggaaca actttcttct
      601 tttgatattt caccaagaga aaagctaata gataccaaaa ctggtttgca agttcacagt
      661 aatctccacg ctggaaggac acgtgtgtat tttggctcaa gacgatcttt tttctgtcgg
      721 ataaagagtt gtaaaatctc tgtcaaagaa gagcatggat gcttacccaa ctcaaagaag
      781 aaagagcaca gaaaattcta tactatccat tgcactggtt acttgagaag ctggcctcca
      841 aatattgttg gaatggaaga agaaaggaac agtaagaaag acaacagtaa ttttacctgc
      901 cttgtggcca ttggaagatt acagccatat attgttccac agaacagtgg agagattaat
      961 gtgaaaccaa ctgaatttat aacccggttt gcagtgaatg gaaaatttgt ctatgtagat
     1021 caaagggcaa cagcgatttt aggatatctg cctcaggaac ttttgggaac ttcttgttat
     1081 gaatattttc atcaagatga ccacaataat ttgactgaca agcacaaagc agttctacag
     1141 agtaaggaga aaatacttac agattcctac aaattcagag caaaagatgg ctcttttgta
     1201 actttaaaaa gccaatggtt tagtttcaca aatccttgga caaaagaact ggaatatatt
     1261 gtatctgtca acactttagt tttgggacat agtgagcctg gagaagcatc atttttacct
     1321 tgtagctctc aatcatcaga agaatcctct agacagtcct gtatgagtgt acctggaatg
     1381 tctactggaa cagtacttgg tgctggtagt attggaacag atattgcaaa tgaaattctg
     1441 gatttacaga ggttacagtc ttcttcatac cttgatgatt cgagtccaac aggtttaatg
     1501 aaagatactc atactgtaaa ctgcaggagt atgtcaaata aggagttgtt tccaccaagt
     1561 ccttctgaaa tgggggagct agaggctacc aggcaaaacc agagtactgt tgctgtccac
     1621 agccatgagc cactcctcag tgatggtgca cagttggatt tcgatgccct atgtgacaat
     1681 gatgacacag ccatggctgc atttatgaat tacttagaag cagagggggg cctgggagac
     1741 cctggggact tcagtgacat ccagtggacc ctctagcctt tgatttttaa ctccaaaaat
     1801 gagaaacatt ttaaagcatt tcatttacga aaaactgtct caactattct taagtactgt
     1861 attgatattg tttgtatctt ttattaatgt tctaccactt tttatagatt tgcatcttcc
     1921 tgtcacaggg atgtggggaa atacgttttc ctcccaagag aaccaagtt
//