LOCUS AF231339 1969 bp mRNA linear HUM 18-SEP-2000 DEFINITION Homo sapiens bHLH-PAS transcription factor MOP9 (MOP9) mRNA, short form, complete cds, alternatively spliced. ACCESSION AF231339 VERSION AF231339.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1969) AUTHORS Hogenesch,J.B., Gu,Y.Z., Moran,S.M., Shimomura,K., Radcliffe,L.A., Takahashi,J.S. and Bradfield,C.A. TITLE The basic helix-loop-helix-PAS protein MOP9 is a brain-specific heterodimeric partner of circadian and hypoxia factors JOURNAL J. Neurosci. 20 (13), RC83 (2000) PUBMED 10864977 REFERENCE 2 (bases 1 to 1969) AUTHORS Hogenesch,J.B., Gu,Y.-Z., Moran,S.M., Laurel,R.A., Shimomura,K., Takahashi,J.S. and Bradfield,C.A. TITLE Direct Submission JOURNAL Submitted (04-FEB-2000) McArdle Cancer Center, University of Wisconsin, 1400 University Avenue, Madison, WI 53706, USA FEATURES Location/Qualifiers source 1..1969 /db_xref="H-InvDB:HIT000074610" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="12" /map="12p11.23-p11.22" gene 1..1969 /gene="MOP9" CDS 58..1776 /gene="MOP9" /note="short form; alternatively spliced" /codon_start=1 /product="bHLH-PAS transcription factor MOP9" /protein_id="AAF71307.1" /translation="MGSFSSHMTEFPRKRKGSDSDPSHQNPLTYLLSTRIEISASSGS REAHSQTEKRRRDKMNNLIEELSAMIPQCNPMARKLDKLTVLRMAVQHLRSLKGLTNS YVGSNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASLTG QSLFDFLHPKDVAKVKEQLSSFDISPREKLIDTKTGLQVHSNLHAGRTRVYFGSRRSF FCRIKSCKISVKEEHGCLPNSKKKEHRKFYTIHCTGYLRSWPPNIVGMEEERNSKKDN SNFTCLVAIGRLQPYIVPQNSGEINVKPTEFITRFAVNGKFVYVDQRATAILGYLPQE LLGTSCYEYFHQDDHNNLTDKHKAVLQSKEKILTDSYKFRAKDGSFVTLKSQWFSFTN PWTKELEYIVSVNTLVLGHSEPGEASFLPCSSQSSEESSRQSCMSVPGMSTGTVLGAG SIGTDIANEILDLQRLQSSSYLDDSSPTGLMKDTHTVNCRSMSNKELFPPSPSEMGEL EATRQNQSTVAVHSHEPLLSDGAQLDFDALCDNDDTAMAAFMNYLEAEGGLGDPGDFS DIQWTL" BASE COUNT 623 a 379 c 409 g 558 t ORIGIN 1 ccgggcaggt ctcctgtggt ttccagccgc gtgagtccag ggacaagacc aacagctatg 61 gggtctttca gctcacacat gacagagttt ccacgaaaac gcaaaggaag tgattcagac 121 ccatcccatc agaatcccct tacctatctt ctttcaacaa ggatagaaat atcagcctcc 181 agtggcagca gagaagctca tagccaaact gaaaagcgga ggagagataa aatgaataac 241 ctgattgaag aactgtctgc aatgatccct cagtgcaacc ccatggcgcg taaactggac 301 aaacttacag ttttaagaat ggctgttcaa cacttgagat ctttaaaagg cttgacaaat 361 tcttatgtgg gaagtaatta tagaccatca tttcttcagg ataatgagct cagacattta 421 atccttaaga ctgcagaagg cttcttattt gtggttggat gtgaaagagg aaaaattctc 481 ttcgtttcta agtcagtctc caaaatactt aattatgatc aggctagttt gactggacaa 541 agcttatttg acttcttaca tccaaaagat gttgccaaag taaaggaaca actttcttct 601 tttgatattt caccaagaga aaagctaata gataccaaaa ctggtttgca agttcacagt 661 aatctccacg ctggaaggac acgtgtgtat tttggctcaa gacgatcttt tttctgtcgg 721 ataaagagtt gtaaaatctc tgtcaaagaa gagcatggat gcttacccaa ctcaaagaag 781 aaagagcaca gaaaattcta tactatccat tgcactggtt acttgagaag ctggcctcca 841 aatattgttg gaatggaaga agaaaggaac agtaagaaag acaacagtaa ttttacctgc 901 cttgtggcca ttggaagatt acagccatat attgttccac agaacagtgg agagattaat 961 gtgaaaccaa ctgaatttat aacccggttt gcagtgaatg gaaaatttgt ctatgtagat 1021 caaagggcaa cagcgatttt aggatatctg cctcaggaac ttttgggaac ttcttgttat 1081 gaatattttc atcaagatga ccacaataat ttgactgaca agcacaaagc agttctacag 1141 agtaaggaga aaatacttac agattcctac aaattcagag caaaagatgg ctcttttgta 1201 actttaaaaa gccaatggtt tagtttcaca aatccttgga caaaagaact ggaatatatt 1261 gtatctgtca acactttagt tttgggacat agtgagcctg gagaagcatc atttttacct 1321 tgtagctctc aatcatcaga agaatcctct agacagtcct gtatgagtgt acctggaatg 1381 tctactggaa cagtacttgg tgctggtagt attggaacag atattgcaaa tgaaattctg 1441 gatttacaga ggttacagtc ttcttcatac cttgatgatt cgagtccaac aggtttaatg 1501 aaagatactc atactgtaaa ctgcaggagt atgtcaaata aggagttgtt tccaccaagt 1561 ccttctgaaa tgggggagct agaggctacc aggcaaaacc agagtactgt tgctgtccac 1621 agccatgagc cactcctcag tgatggtgca cagttggatt tcgatgccct atgtgacaat 1681 gatgacacag ccatggctgc atttatgaat tacttagaag cagagggggg cctgggagac 1741 cctggggact tcagtgacat ccagtggacc ctctagcctt tgatttttaa ctccaaaaat 1801 gagaaacatt ttaaagcatt tcatttacga aaaactgtct caactattct taagtactgt 1861 attgatattg tttgtatctt ttattaatgt tctaccactt tttatagatt tgcatcttcc 1921 tgtcacaggg atgtggggaa atacgttttc ctcccaagag aaccaagtt //