LOCUS AF227257 2394 bp mRNA linear HUM 05-SEP-2000
DEFINITION Homo sapiens RPGR-interacting protein-1 (RPGRIP1) mRNA, complete
cds.
ACCESSION AF227257
VERSION AF227257.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2394)
AUTHORS Roepman,R., Bernoud-Hubac,N., Schick,D.E., Maugeri,A., Berger,W.,
Ropers,H.H., Cremers,F.P. and Ferreira,P.A.
TITLE The retinitis pigmentosa GTPase regulator (RPGR) interacts with
novel transport-like proteins in the outer segments of rod
photoreceptors
JOURNAL Hum. Mol. Genet. 9 (14), 2095-2105 (2000)
PUBMED 10958648
REFERENCE 2 (bases 1 to 2394)
AUTHORS Roepman,R., Bernoud-Hubac,N., Schick,D.E., Maugeri,A., Berger,W.,
Ropers,H.-H., Cremers,F.P.M. and Ferreira,P.A.
TITLE Direct Submission
JOURNAL Submitted (20-JAN-2000) Human Genetics, University Hospital
Nijmegen, P.O. Box 9101, Nijmegen, HB 6500, The Netherlands
FEATURES Location/Qualifiers
source 1..2394
/db_xref="H-InvDB:HIT000074462"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="14"
/map="14q11"
/tissue_type="retina"
gene 1..2394
/gene="RPGRIP1"
CDS 1..2289
/gene="RPGRIP1"
/codon_start=1
/product="RPGR-interacting protein-1"
/protein_id="AAG10246.1"
/translation="MLILQRKINVCYQELEAMMTKSDNDNRDSQREKLERLTRLLDLK
NNRIKQLEGILRSHDLPTSEQLKDVAYGTRPLSLCLETLPAHGDEDKVDISLLHQGEN
LFELHIHQAFLTSAALAQAGDTQPTTFCTYSFYDFETHCTPLSVGPQPLYDFTSQYVM
ETDSLFLHYLQEASARLDIHQAMASEHSTLAAGWICFDRVLETVEKVHGLATLIGAGG
EEFGVLEYWMRLRFPIKPSLQACNKRKKAQVYLSTDVLGGRKAQEEEFRSESWEPQNE
LWIEITKCCGLRSRWLGTQPSPYAVYRFFTFSDHDTAIIPASNNPYFRDQARFPVLVT
SDLDHYLRREALSIHVFDDEDLEPGSYLGRARVPLLPLAKNESIKGDFNLTDPAEKPN
GSIQVQLDWKFPYIPPESFLKPEAQTKGKDTKDSSKISSEEEKASFPSQDQMASPEVP
IEAGQYRSKRKPPHGGERKEKEHQVVSYSRRKHGKRIGVQGKNRMEYLSLNILNGNTP
EQVNYTEWKFSETNSFIGDGFKNQHEEEEMTLSHSALKQKEPLHPVNDKESSEQGSEV
SEAQTTDSDDVIVPPMSQKYPKADSEKMCIEIVSLAFYPEAEVMSDENIKQVYVEYKF
YDLPLSETETPVSLRKPRAGEEIHFHFSKVIDLDPQEQQGRRRFLFDMLNGQDPDQGH
LKFTVVSDPLDEEKKECEEVGYAYLQLWQILESGRDILEQELDIVSPEDLATPIGRLK
VSLQAAAVLHAIYKEMTEDLFS"
3'UTR 2290..2394
/gene="RPGRIP1"
BASE COUNT 730 a 538 c 566 g 560 t
ORIGIN
1 atgcttattc tgcagcgcaa aatcaacgtg tgttatcagg aactggaggc aatgatgaca
61 aaatctgaca atgataatag agactcacaa agagaaaagc tggagaggtt gactcgacta
121 ctagacctca agaataaccg tatcaagcag ctggaaggta ttttaagaag ccatgacctt
181 ccaacatctg aacagctcaa agatgttgct tatggcaccc gaccgttgtc gttatgtttg
241 gaaacactgc cagcccatgg agatgaggat aaagtggata tttctctgct gcatcagggt
301 gagaatcttt ttgaactgca catccaccag gccttcctga catctgccgc cctagctcag
361 gctggagata cccaacctac cactttctgc acctattcct tctatgactt tgaaacccac
421 tgtaccccat tatctgtggg gccacagccc ctctatgact tcacctccca gtatgtgatg
481 gagacagatt cgcttttctt acactacctt caagaggctt cagcccggct tgacatacac
541 caggccatgg ccagtgaaca cagcactctt gctgcaggat ggatttgctt tgacagggtg
601 ctagagactg tggagaaagt ccatggcttg gccacactga ttggagctgg tggagaagag
661 ttcggggttc tagagtactg gatgaggctg cgtttcccca taaaacccag cctacaggcg
721 tgcaataaac gaaagaaagc ccaggtctac ctgtcaaccg atgtgcttgg aggccggaag
781 gcccaggaag aggagttcag atcggagtct tgggaacctc agaacgagct gtggattgaa
841 atcaccaagt gctgtggcct ccggagtcga tggctgggaa ctcaacccag tccatatgct
901 gtgtaccgct tcttcacctt ttctgaccat gacactgcca tcattccagc cagtaacaac
961 ccctacttta gagaccaggc tcgattccca gtgcttgtga cctctgacct ggaccattat
1021 ctgagacggg aggccttgtc tatacatgtt tttgatgatg aagacttaga gcctggctcg
1081 tatcttggcc gagcccgagt gcctttactg cctcttgcaa aaaatgaatc tatcaaaggt
1141 gattttaacc tcactgaccc tgcagagaaa cccaacggat ctattcaagt gcaactggat
1201 tggaagtttc cctacatacc ccctgagagc ttcctgaaac cagaagctca gactaagggg
1261 aaggatacca aggacagttc aaagatctca tctgaagagg aaaaggcttc atttccttcc
1321 caggatcaga tggcatctcc tgaggttccc attgaagctg gccagtatcg atctaagaga
1381 aaacctcctc atgggggaga aagaaaggag aaggagcacc aggttgtgag ctactcaaga
1441 agaaaacatg gcaaaagaat aggtgttcaa ggaaagaata gaatggagta tcttagcctt
1501 aacatcttaa atggaaatac accagagcag gtgaattaca ctgagtggaa gttctcagag
1561 actaacagct tcataggtga tggctttaaa aatcagcacg aggaagagga aatgacatta
1621 tcccattcag cactgaaaca gaaggaacct ctacatcctg taaatgacaa agaatcctct
1681 gaacaaggtt ctgaagtcag tgaagcacaa actaccgaca gtgatgatgt catagtgcca
1741 cccatgtctc agaaatatcc taaggcagat tcagagaaga tgtgcattga aattgtctcc
1801 ctggccttct acccagaggc agaagtgatg tctgatgaga acataaaaca ggtgtatgtg
1861 gagtacaaat tctacgacct acccttgtcg gagacagaga ctccagtgtc cctaaggaag
1921 cctagggcag gagaagaaat ccactttcac tttagcaagg taatagacct ggacccacag
1981 gagcagcaag gccgaaggcg gtttctgttc gacatgctga atggacaaga tcctgatcaa
2041 ggacatttaa agtttacagt ggtaagtgat cctctggatg aagaaaagaa agaatgtgaa
2101 gaagtgggat atgcatatct tcaactgtgg cagatcctgg agtcaggaag agatattcta
2161 gagcaagagc tagacattgt tagccctgaa gatctggcta ccccaatagg aaggctgaag
2221 gtttcccttc aagcagctgc tgtcctccat gctatttaca aggagatgac tgaagatttg
2281 ttttcatgaa ggaacaagtg ctattccaat ctaaaagtct ctgagggaac catagtaaaa
2341 agtctcttat aaagttagct tgctataaca tgaaaaaaaa aaaaaaaaaa aaaa
//