LOCUS AF217743 2601 bp mRNA linear HUM 09-MAY-2001
DEFINITION Homo sapiens protocadherin-psi2 (PCDH-psi2) mRNA, complete cds.
ACCESSION AF217743
VERSION AF217743.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2601)
AUTHORS Vanhalst,K., Kools,P., Vanden Eynde,E. and van Roy,F.
TITLE The human and murine protocadherin-beta one-exon gene families show
high evolutionary conservation, despite the difference in gene
number
JOURNAL FEBS Lett. 495 (1-2), 120-125 (2001)
PUBMED 11322959
REFERENCE 2 (bases 1 to 2601)
AUTHORS Kools,P.F.J. and Van Roy,F.
TITLE Direct Submission
JOURNAL Submitted (20-DEC-1999) Department of Molecular Biology, Ghent
University, Flanders Interuniversity Institute for Biotechnology
(VIB), Ledeganckstraat 35, Ghent B-9000, Belgium
FEATURES Location/Qualifiers
source 1..2601
/db_xref="H-InvDB:HIT000074184"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
gene <1..2601
/gene="PCDH-psi2"
CDS 1..2205
/gene="PCDH-psi2"
/note="truncated from of a protocadherin-beta
transmembrane glycoprotein"
/codon_start=1
/product="protocadherin-psi2"
/protein_id="AAK51611.1"
/translation="MWKTWLQGGARVIFDDYKPYLRLDPQNGDLLLNEQLDREALCDL
TEPCILHFQVLFENPLQFFRAELLVKDINDHTPTFLNNHMLLKISEGATLGTLFQIDS
AQDLDVGKNGVQNYTISPNPHFHLKLRDSDEGRKYPELVLDQSLDREKVSEFSLTLTA
VDGGSPPRSGTTLINVVVLDISDNAPEFEKPVYEVHVPESSPLDSLIIKASATDLDAG
INGELSYSFSHVSRDVRKTFEIHPISGEVYLKAPLDFEIIQSYIINIQAIEGGSLSGK
SSILVRVVDVNDNPPEIAMTSLTSPIPENSSPEMVVAVFSIRDQDAGDNGRTVCSIQD
NLPFVLKPTFKNFYALVTEHPLDREVRNEYNITITVTDLGTPRLKTEHNITVLVSDVN
DNAPIFTQTSYTLFVRENNSPALHIGSVSATDRDSGTNAQVTYSLLPPQDPHLPLTSL
VSINADNGHLFALRSLDYEALQEFGFRVGAADHGSPALSSEVLVRVLVLDANDNSPFV
LYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWA
HNGEGRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHVLLVEGFSQPYLPLTEAA
PSQAQADSLTVYLVVALASVSSLFLFSVFLFVAVRLCRRSRAASMGRCSVPECPFPGH
LVDVSGTGTLSQSYQYEVCLTGGSGANEFKFLKPVIPNLLSRDSEMEKAPPF"
regulatory 2586..2591
/regulatory_class="polyA_signal_sequence"
/gene="PCDH-psi2"
polyA_site 2601
/gene="PCDH-psi2"
BASE COUNT 625 a 687 c 654 g 635 t
ORIGIN
1 atgtggaaga cctggctgca agggggggcc agagtcatct ttgacgacta taaaccttat
61 ttgcgattgg atccacagaa tggcgacttg ctcttaaacg agcagctgga ccgggaggca
121 ctttgtgatc tcacagagcc atgtatattg catttccagg tgttatttga aaatccgttg
181 caattttttc gtgctgagct tttggtcaaa gacataaatg atcacactcc cacgttccta
241 aacaatcata tgcttctaaa aatctccgaa ggtgctactc taggaacctt attccaaata
301 gatagtgcgc aggacttgga tgtgggaaag aatggtgttc aaaactatac aataagtccc
361 aatccccatt tccaccttaa attacgggat agcgatgagg gcagaaaata tccagagttg
421 gtactggacc aatccctgga tcgagaaaag gtgtctgagt ttagtttaac gctaacagcc
481 gtggatggcg ggtctccgcc caggtctggg actacactga ttaacgttgt ggtcctggac
541 atcagtgaca atgcccctga atttgagaag ccagtctatg aagttcatgt acctgagagc
601 agccctctgg actccttgat catcaaagcg tctgctacag atttagatgc aggaataaat
661 ggagaactgt cttattcatt ttcccacgtc tccagagatg tacggaaaac atttgaaatc
721 catccaattt ctggcgaagt ctatttaaaa gcccctctag atttcgagat tattcaatct
781 tatatcataa atattcaggc cattgaaggt gggagccttt ctggaaaatc aagcatttta
841 gttcgggttg tagatgtgaa tgacaacccg ccagaaatag ccatgacatc tcttaccagc
901 cccataccgg aaaactcttc acctgagatg gtggtcgctg ttttcagcat acgagaccaa
961 gacgctggag acaatgggag aacagtttgc tcaattcagg acaacctccc ctttgtcttg
1021 aagcctacct tcaagaattt ttacgctctg gtaacagagc acccactgga cagagaggtc
1081 agaaatgaat ataacatcac catcaccgtg accgacttgg ggacacccag gctgaaaacc
1141 gagcacaaca taaccgtgct ggtctccgac gtcaatgaca acgcccccat cttcacccaa
1201 acctcctaca ccctgttcgt ccgcgagaac aacagccccg ccctgcacat cggcagcgtc
1261 agcgctacag acagagactc aggcaccaac gcccaggtca cctactcgct gctgccgccc
1321 caggacccgc acctgcccct cacctccctg gtctccatca acgcggacaa cggccaccta
1381 ttcgccctca ggtctttgga ctacgaggcc ctgcaggagt tcgggtttcg cgtgggcgcc
1441 gcagaccacg gctccccggc gctgagcagc gaggtgctgg tgcgcgtgct ggtgctggac
1501 gccaacgaca actcgccctt cgtgctgtac ccgctgcaga acggctcggc gccctgcacc
1561 gagctggtac ctcgggcggc cgagccgggc tacctggtga ccaaggtggt ggcggtggac
1621 ggcgactcgg gccagaacgc ctggctgtcg taccagctgc tcaaggccac ggagcccggg
1681 ctgttcggcg tgtgggcgca caatggcgag gggcgcaccg ccaggctgct gagcgagcgc
1741 gacgcggcca agcacaggct ggtggtgctg gtcaaggaca atggcgagcc tccgcgctcg
1801 gccaccgcca cgctgcacgt gctcctggtg gagggcttct ctcagcccta cctgcctctc
1861 acggaggctg ccccctccca ggcccaggcc gactccctca ccgtctacct ggtggtggcg
1921 ttggcctcgg tgtcgtcgct cttcctcttc tcggtgttcc tgttcgtggc ggtgcggctg
1981 tgcaggagga gcagggcggc ctcgatgggt cgctgctcgg tgcccgagtg tccctttcca
2041 gggcatctgg tagacgtgag cggcaccggg accctatccc agagctacca gtacgaggtg
2101 tgtctgacgg gaggctcagg ggcaaatgag ttcaagttcc tgaagccggt gattcccaat
2161 ctcctgtccc gcgacagcga aatggagaaa gccccacctt tctgaatggc gtggaatgca
2221 attagggatc tgattatgat gcagaacttt tagaatgagt ctatttcttt gaaatcttat
2281 tcattgttat gcagagtttt tcattttggg taactgcatt ttactcaaga gttttcagaa
2341 gttacaagaa tttaagtcta ttttttgttg ttttaaccgt gaaaaaattg agagccggaa
2401 tttgcttagt cattgttttg aaatacaacc tcaaataata tattcacaaa cacattattt
2461 tcccttcaag tttaatcgca cactgggctc attcatattt tctgagtgtt ctgactgtgg
2521 atcctctatc caaagcagtt tttatataat tgagaatatt attatagagg taaatgcatg
2581 atatgaataa aaacataatt g
//