LOCUS AF217289 2855 bp mRNA linear HUM 17-OCT-2000
DEFINITION Homo sapiens cadherin 20 (CDH20) mRNA, complete cds.
ACCESSION AF217289
VERSION AF217289.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2855)
AUTHORS Kools,P., Van Imschoot,G. and van Roy,F.
TITLE Characterization of three novel human cadherin genes (CDH7, CDH19,
and CDH20) clustered on chromosome 18q22-q23 and with high homology
to chicken cadherin-7
JOURNAL Genomics 68 (3), 283-295 (2000)
PUBMED 10995570
REFERENCE 2 (bases 1 to 2855)
AUTHORS Kools,P.F.J. and Van Roy,F.
TITLE Direct Submission
JOURNAL Submitted (20-DEC-1999) Department of Molecular Biology, University
of Ghent, Flanders Interuniversity Institute for Biotechnology,
Ledeganckstraat 35, Ghent B-9000, Belgium
FEATURES Location/Qualifiers
source 1..2855
/db_xref="H-InvDB:HIT000074169"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="18"
/map="18q22-q23"
gene 1..2855
/gene="CDH20"
CDS 13..2418
/gene="CDH20"
/note="F-cadherin; transmembrane glycoprotein of the
atypical cadherin subfamily"
/codon_start=1
/product="cadherin 20"
/protein_id="AAG23739.1"
/translation="MWTSGRMSNAKNWLGLGMSLYFWGLMDLTTTVLSDTPTPQGELE
ALLSDKPQSHQRTKRSWVWNQFFVLEEYTGTDPLYVGKLHSDMDRGDGSIKYILSGEG
AGIVFTIDDTTGDIHAIQRLDREERAQYTLRAQALDRRTGRPMEPESEFIIKIQDIND
NEPKFLDGPYVATVPEMSPVGTSVIQVTATDADDPTYGNSARVVYSILQGQPYFSVDS
KTGVIRTALMNMDREAKEYYEVIIQAKDMGGQLGGLAGTTTVNITLSDVNDNPPRFPQ
KHYQMSVLESAPISSTVGRVFAKDLDEGINAEMKYTIVDGDGADAFDISTDPNFQVGI
ITVKKPLSFESKKSYTLKVEGANPHLEMRFLNLGPFQDTTTVHISVEDVDEPPVFEPG
FYFVEVPEDVAIGTTIQIISAKDPDVTNNSIRYSIDRSSDPGRFFYVDITTGALMTAR
PLDREEFSWHNITVLAMEMNNPSQVGSVPVTIKVLDVNDNAPEFPRFYEAFVCENAKA
GQLIQTVSAVDQDDPRNGQHFYYSLAPEAANNPNFTIRDNQDNTARILTRRSGFRQQE
QSVFHLPILIADSGQPVLSSTGTLTIQVCSCDDDGHVMSCSPEAYMLPVSLSRGPLIA
ILACIFVLLVLVLLILSMRRHRKQPYIIDDEENIHENIVRYDDEGGGEEDTEAFDIAA
MWNPREAQAGAGPKTRQDMLPEIESLFRYVPQTCAVNSTVHSYVLAKLYEADMDLWTP
PFDSLQTYMFEGDGPVAGSLSSLQSATSDSEQSFDFLTDWGPRFRKLAELYGASEGPA
PLW"
BASE COUNT 728 a 744 c 756 g 627 t
ORIGIN
1 cctggcaatc ccatgtggac ttctggtaga atgagcaatg caaagaactg gcttggactt
61 ggcatgtcct tgtacttctg ggggctgatg gaccttacga ccaccgttct ctcggacacc
121 ccaacaccac aaggtgaatt agaagcactc ctgtcagaca agccacagtc acatcagcgg
181 accaagagga gctgggtttg gaaccagttt ttcgttctgg aagagtacac tgggaccgac
241 cctttgtatg tcggcaagct tcattcagat atggacaggg gagacggatc catcaaatac
301 atcctctcgg gagaaggtgc tggcatcgtg tttaccatcg acgacaccac tggagacatc
361 cacgccattc agaggctcga ccgagaggaa agagcccagt atactctaag ggctcaagcc
421 ctagacaggc ggacgggcag gccaatggag cccgagtcag agttcatcat caaaattcaa
481 gacatcaatg acaatgagcc caagttcctg gacggacctt atgtggccac tgtgccagaa
541 atgtcccctg tgggtacctc cgtcatccaa gtgacagcca cagatgcaga tgacccgacc
601 tacggcaaca gtgccagggt ggtgtacagc attcttcagg gccagccata tttttctgtg
661 gactctaaaa caggtgtaat taggacagcg ctcatgaaca tggacagaga agccaaagaa
721 tactacgaag tgattatcca agccaaggac atgggagggc agcttggagg attagctggg
781 accacaacag tcaacatcac cctctcagat gtcaatgata acccaccccg ctttccccag
841 aaacattacc agatgagtgt gttggaatca gctccaatta gctccactgt cgggagagtg
901 tttgccaagg acttggatga aggcatcaat gcagagatga aatatactat tgtggatgga
961 gatggtgcag atgcctttga cattagcaca gatcccaatt tccaagttgg tatcataact
1021 gtgaagaagc ccctgagttt tgaaagcaag aaaagctaca ccttaaaggt ggagggagcc
1081 aatcctcacc tagagatgcg ttttctgaac ttgggcccat ttcaggacac aacaacagtg
1141 cacatcagtg tggaagacgt ggacgagccc cctgtgtttg aacctggctt ttactttgtg
1201 gaggtgcctg aggatgtggc gattggaaca accatacaga tcatttctgc caaggaccca
1261 gatgtgacca acaactcaat cagatactcc attgatagaa gcagtgaccc tggaagattt
1321 ttctatgttg acattacaac aggtgcccta atgacagcaa gacccctaga ccgggaagaa
1381 ttttcttggc ataatatcac tgtccttgct atggaaatga acaatccctc ccaggttgga
1441 agtgttcctg tcacaatcaa agtcttagat gtgaatgaca atgctccaga gttccccaga
1501 ttctatgaag cttttgtctg tgagaacgcc aaggcaggac agctgatcca gacagtgagt
1561 gcggtggacc aagatgaccc acgcaatggt cagcatttct actacagctt ggctcctgag
1621 gctgctaaca accccaactt taccataagg gacaaccaag ataacacagc acggattcta
1681 accaggaggt ctggtttccg gcagcaggag cagagtgtct ttcacctgcc tatcctgata
1741 gcagatagcg ggcagcccgt gctgagcagc acaggcacac tgaccatcca agtgtgcagc
1801 tgtgatgacg acggccacgt catgtcctgc agcccagagg cctacatgct cccagtcagt
1861 ttgagccggg gccccctcat tgccatcctc gcctgcatct ttgtcctcct agtgctggtg
1921 ttgctcattt tgtccatgag gcggcaccgg aaacaaccat acatcatcga cgacgaggaa
1981 aacatccacg agaacatcgt ccgctacgac gacgagggcg gcggcgagga ggacaccgag
2041 gccttcgaca tcgcggccat gtggaacccc cgggaggcgc aggcgggggc cggccccaag
2101 acgcggcagg acatgctgcc cgagatcgag agcctcttcc gctacgtgcc tcagacgtgc
2161 gcagtgaaca gcactgtcca cagctacgtg ctggccaagc tctacgaggc cgacatggac
2221 ctgtggacac cgcccttcga ctccctccag acgtatatgt tcgaggggga cggccctgtg
2281 gcggggtcgc tgagctccct gcagtcggcc acgtcggact cggaacagag cttcgacttc
2341 ctgacggact gggggccccg cttccggaag ctggccgagc tctacggggc gtcggaggga
2401 cccgcgccgc tgtggtgacg gaagccagga ggcaggcgcg cgtccaaatc cagacgttct
2461 ccgcgggtgc ttcgcggaca aggtgcagcc aaccacacga gcaatactgt gctggagagt
2521 gagaatgggg gtgagcaggc gaacagagct ctctctggat cagctttact tgggtagatt
2581 aagttaaata agcaaaagga aacccagaag gaagagggca gaatctttaa ttaccttttt
2641 ttcttttctt tttgattttt ctgacactgt gtgcgaaggc ttggagtcca aggtgttctg
2701 acaagggtgg cttttctctg ccattcgcta aggcctttgt cacttttcca ccacagaaag
2761 gctctggcct tggatacaga gatgccaatt gaaagcagaa agttctactc tcgtatctgt
2821 tttttatctt atcttattct ccatttaaga gtttt
//