LOCUS AF205601 3602 bp DNA linear HUM 16-DEC-1999
DEFINITION Homo sapiens transposon-derived Buster1 transposase-like protein
gene, complete cds.
ACCESSION AF205601
VERSION AF205601.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3602)
AUTHORS Smit,A.F.
TITLE Interspersed repeats and other mementos of transposable elements in
mammalian genomes
JOURNAL Curr. Opin. Genet. Dev. 9 (6), 657-663 (1999)
PUBMED 10607616
REFERENCE 2 (bases 1 to 3602)
AUTHORS Smit,A.F.A.
TITLE Direct Submission
JOURNAL Submitted (17-NOV-1999) Genome Center, University of Washington,
Seattle, WA, USA
FEATURES Location/Qualifiers
source 1..3602
/organism="Homo sapiens"
/mol_type="genomic DNA"
/db_xref="taxon:9606"
/chromosome="11"
/map="11q15"
repeat_region 50..182
/rpt_family="MER58A"
/rpt_type=dispersed
mRNA <437..2758
/product="transposase-like protein"
/note="splice site indicated by GenBank Accession Number
AF205600"
CDS 610..2691
/note="similar to transposase of hAT-like Charlie1
transposon; Buster1 protein"
/codon_start=1
/product="transposase-like protein"
/protein_id="AAF18455.1"
/translation="MIAPLLCILSYNFNTFAILNVYSKLTMFCTTNSLPMDLLLKQGS
LKQEVESFCYQIVSESNDQKVGILQSEDKQLQPSVSKKSEGELSRVKFISNSNKITFS
KKPKRRKYDESYLSFGFTYFGNRDAPHAQCVLCKKILSNSSLAPSKLRRHLETKHAAY
KDKDISFFKQHLDSPENNKPPTPKIVNTDNESATEASYNVSYHIALSGEAHTIGELLI
KPCAKDVVMRMFDEQYSKKIDAVQLSNSTVARRIKDLAADIEEELVCRLKICDGFSLQ
LDESADVSGLAVLLVFVRYRFNKSIEEDLLLCESLQSNATGEEIFNCINSFMQKHEIE
WEKCVDVCSDASRAVDGKIAEAVTLIKYVAPESTSSHCLLYRHALAVKIMPTSLKNVL
DQAVQIINYIKARPHQSRLLKILCEEMGAQHTALLLNTEVRWLSRGKVLVRLFELRRE
LLVFMDSAFRLSDCLTNSSWLLRLAYLADVFTKLNEVNLSMQGKNVTVFTVFDKMSSL
LRKLEFWASSVEEENFDCFPTLSDFLTEINSTVDKDICSAIVQHLRGLRATLLKYFPV
TNDNNAWVRNPFTVTVKPASLVARDYESLIDLTSDSQVKQNFSELSLNDFWSSLIQEY
PSIARRAVRVLLPFATMHLCETGFSYYAATKTKYRKRLDAAPHMRIRLSNITPNIKRI
CDKKTQKHCSH"
repeat_region 2939..3069
/rpt_family="LINE2"
/rpt_type=dispersed
BASE COUNT 1124 a 623 c 664 g 1188 t
ORIGIN
1 aaagagattt cacaatacta cataccatga gacagggctg ataaattatg gcccatgctg
61 tctggttttg tacgtaaagt tttattggaa cacacctgtg tccattcttt catgtattgt
121 ctatggctgc tgtcatgtta caactacaga gttgagtagt tgcaacagag actatatggc
181 ccttgaccaa aaaaagcctg ccaacccctg ccatgggaca tattcttcag ggtccctttc
241 ttaaaaatat gtataacaac tcttaataat ttattggctc agtgattccc aaattatgtt
301 ttatagaata ttaatattct ctaagttaat aaatgttttg agaaaatgat tgatgctaat
361 attggttttt ctttatggtt gattttaata tgtttattta aatatgagat taagactgct
421 aaactcattt ctatagcttt tatttttatg tgataatcta cctttaagaa aaggtgtacc
481 atacctgaga gcaccaggaa gtcgcatgag agatcacctg atacatgaac gtatgatgtt
541 ccatctgcgc attgatgaat aggcagcatt tacaaattaa ctgatgtgtt gctgtatatc
601 atctctttga tgattgctcc tcttctttgt atcctgtctt ataatttcaa cacatttgcg
661 atactcaatg tctattctaa attaaccatg ttttgtacca caaactcatt gcccatggat
721 ctgttgctga aacaaggaag tcttaaacaa gaagtggaat ctttctgtta tcagattgtg
781 tctgaatcaa atgatcagaa ggttggaata ttacaaagtg aagataagca gttgcaacct
841 tcagtttcta aaaaatcaga aggtgagctt tccagggtca aatttatatc caattccaac
901 aaaataacat ttagtaaaaa accaaaaaga agaaaatatg atgaaagtta tttgtctttt
961 ggatttactt acttcggaaa tagagatgca cctcatgctc agtgtgtatt atgtaagaaa
1021 attttatcaa atagctcttt agcccctagt aagcttcgaa gacatttgga aactaaacat
1081 gctgcatata aagacaaaga cataagcttt ttcaagcaac atctcgattc acctgaaaat
1141 aataaacccc caacacctaa aattgtgaat acagataatg aaagtgctac agaagcatca
1201 tacaatgtaa gttaccatat agcgctgagt ggagaggctc atactattgg agaattgctt
1261 atcaaacctt gtgcaaaaga tgtagtgatg cggatgtttg atgaacaata tagtaaaaaa
1321 atagatgcag tacagctatc aaacagtact gttgcacgtc gaattaagga tctagctgct
1381 gacattgaag aagagcttgt ttgtagactg aaaatttgcg atgggttttc actgcaacta
1441 gatgaatcag ctgatgtttc aggacttgct gtgctgcttg tgtttgttcg ttataggttt
1501 aataagtcta ttgaggaaga cctactcctg tgtgaatctt tgcaaagtaa tgctaccggt
1561 gaagaaatat tcaactgtat caacagtttt atgcagaaac atgaaattga atgggaaaaa
1621 tgtgttgatg tttgtagtga tgcttctagg gcagtggatg ggaaaattgc cgaagctgtc
1681 accttaataa aatatgtggc tcccgaaagc accagtagtc actgcctatt atacagacat
1741 gcactggcag ttaaaataat gcctacatct ctaaaaaatg tgctagacca ggcagtacaa
1801 atcatcaatt atattaaagc tcgaccacat caatccagac tattaaaaat tttatgtgag
1861 gaaatgggtg ctcagcacac agcacttctt ctaaatacag aggtgaggtg gctttctcga
1921 ggtaaagttc ttgtaagact ttttgaactt cgtcgtgaac ttttggtttt catggattct
1981 gcttttcgac tatctgattg tttaacaaat tcatcttggc tgctaagact tgcatatctt
2041 gcagatgttt ttactaaatt aaatgaagtt aatttgtcaa tgcaaggaaa aaatgtgacc
2101 gtttttacag tatttgataa aatgtcgtca ttgttaagaa aattggaatt ttgggcctca
2161 tctgtagaag aagaaaactt tgattgtttt cctacactca gtgatttttt gactgaaatt
2221 aattctacag ttgataaaga tatttgcagt gccattgtgc agcacctaag gggtttgcgc
2281 gctactctgt taaaatactt tcctgtaaca aatgacaata atgcttgggt tagaaatcca
2341 tttacagtta ctgttaaacc agcttcatta gtagcacggg actatgagag cctgattgat
2401 ttaacatctg attctcaagt gaagcaaaat tttagtgaac tttcactaaa tgatttttgg
2461 agtagcctaa ttcaggaata cccaagcatt gcaaggcgtg cagtgcgtgt acttcttcct
2521 tttgctacaa tgcacctgtg tgaaacgggg ttttcatatt acgctgcaac aaaaacaaaa
2581 tataggaaaa gacttgatgc tgcacctcat atgcgaatcc gacttagcaa tattacacct
2641 aatattaagc ggatatgtga taaaaagaca caaaaacact gttctcatta aaattggagg
2701 agtttgcatg tctcatgata accaaatgta agatgaaaat aaaagatgat ttacttcatc
2761 tctggtattt gggggattta aataaaatga ttccattttt ttatactatt tagattttaa
2821 gaaggctaaa gaatcaaacg ttttaaacat attgtgttat tattggtatt tctttacatt
2881 gtaattttaa agagttccat gatcataact gggaaataat gatccccaag ataaagtccc
2941 agtcccttaa catatctctt caggatctaa tccctaccaa tctttccgtg tctactctgc
3001 agctctccaa tcccatggaa cttcttgcca ttccctaaac atatcacact gttttatcgt
3061 ttcaggtctc aaaaagcgat tctgtcccca tcttactttc tggtaggctc ctatttgctt
3121 caacactttg acttgtaggt actttcattc tctgtatctt cctattttga tgctgtttca
3181 cacttgtatt taatgtttgt gtctgtctca actgtgaact ccttgatggt ctcacggttc
3241 ccaatgtttt cagactaagc tcttagagag tcttattgag tcttatccaa atctgtgtct
3301 ccataatctg gaaaaaggct ttactaaatt agatgctcag taaaggaaaa acatgttggt
3361 gaaagtgaac caacaaaaaa tggaatgggg gatttcctac attcattgat tggtatggta
3421 gcaggtgtac acactgctac cctttgggtt ttttggctca cttactctat taactacagt
3481 tcagtgtggc cattatgcag aggtcaycca ggaatgtcat asttttatga ttcaggctga
3541 actattgagg gacaggggat gaastgtgaa gagtattttc agatactttg tttttttctc
3601 ag
//