LOCUS AF190323 2909 bp mRNA linear HUM 18-JUL-2006 DEFINITION Homo sapiens type I interferon receptor beta chain-associated protein splice variant (BARA) mRNA, complete cds, alternatively spliced. ACCESSION AF190323 VERSION AF190323.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2909) AUTHORS Sandoval,R., Xue,J., Tian,X., Barrett,K., Pilkinton,M., Ucker,D.S., Raychaudhuri,P., Kineman,R.D., Luque,R.M., Baida,G., Zou,X., Valli,V.E., Cook,J.L., Kiyokawa,H. and Colamonici,O.R. TITLE A mutant allele of BARA/LIN-9 rescues the cdk4-/- phenotype by releasing the repression on E2F-regulated genes JOURNAL Exp. Cell Res. 312 (13), 2465-2475 (2006) PUBMED 16730350 REFERENCE 2 (bases 1 to 2909) AUTHORS Colamonici,O.R. and Baida,G. TITLE LIN9/BARAsv, a beta chain-asociated regulator of apoptosis, splice variant JOURNAL Unpublished REFERENCE 3 (bases 1 to 2909) AUTHORS Sandoval,R., Xue,J., Tian,X., Datta,A., Barrett,K., Pilkinton,M., Baida,G., Ucker,D., Kineman,R., Kiyokawa,H., Raychaudhuri,P. and Colamonici,O.R. TITLE The mammalian homolog of C. elegans lin-9, BARA, regulates cell proliferation JOURNAL Unpublished REFERENCE 4 (bases 1 to 2909) AUTHORS Baida,G. and Colamonici,O.R. TITLE Direct Submission JOURNAL Submitted (28-SEP-1999) Pharmacology, University of Illinois, 835 S. Wolcott, M/C868 Room E403, Chicago, IL, USA FEATURES Location/Qualifiers source 1..2909 /db_xref="H-InvDB:HIT000242845" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /cell_line="myeloma U-266" gene 1..2909 /gene="BARA" /note="LIN9; beta-subunit associated regulator of apoptosis" CDS 34..1557 /gene="BARA" /note="BARPsv; regulator of proliferation; similar to Caenorhabditis elegans LIN9; alternatively spliced" /codon_start=1 /product="type I interferon receptor beta chain-associated protein splice variant" /protein_id="AAQ13710.1" /translation="MAELDQLPDESSSAKALVSLKEGSLSNTWNEKYSSLQKTPVWKG RNTSSAVEMKFTATMSTPDKKASQKIGFRLRNLLKLPKAHKWCIYEWFYSNIDKPLFE GDNDFCVCLKESFPNLKTRKLTRVEWGKIRRLMGKPRRCSSAFFEEERSALKQKRQKI RLLQQRKVADVSQFKDLPDEIPLPLVIGTKVTARLRGVHDGLFTGQIDAVDTLNATYR VTFDRTGLGTHTIPDYEVLSNEPHETMPIAAFGQKQRPSRFFMTPPRLHYTPPLQSPI IDNDPLLGQSPWRSKISGSDTETLGGFPVEFLIQVTRLSKILMIKKEHIKKLREMNTE AEKLKSYSMPISIEFQRRYATIVLELEQLNKDLNKVLHKVQQYCYELAPDQGLQPADQ PTDMRRRCEEEAQEIVRHANSSTGQPCVENENLTDLISRLTAILLQIKCLAEGGDLNS FEFKSLTDSLNDIKSTIDASNISCFQNNVEIHVAHIQSGLSQMGNLHAFAANNTNRD" BASE COUNT 995 a 476 c 534 g 904 t ORIGIN 1 cagcctttga aaaagcggcg cggctcgttc aagatggcgg agctcgacca gttgcctgac 61 gagagctctt cagcaaaagc ccttgtcagt ttaaaagaag gaagcttatc taacacgtgg 121 aatgaaaagt acagttcttt acagaaaaca cctgtttgga aaggcaggaa tacaagctct 181 gctgtggaaa tgaaatttac agcaacaatg tcaacaccag ataagaaagc ttcacagaag 241 attggttttc gattacgtaa tctgctcaag cttcctaaag cacataaatg gtgtatatac 301 gagtggttct attcaaatat agataaacca ctttttgaag gtgataatga cttttgtgta 361 tgtctaaagg aatcttttcc taatttgaaa acaagaaagt taacaagagt agaatgggga 421 aaaattcggc ggcttatggg aaaaccacgg agatgttctt ctgcattttt tgaggaagag 481 agatcagcat taaaacagaa acggcagaaa ataaggctct tacaacaaag gaaagttgca 541 gatgtttcac aattcaaaga tctcccagat gaaattcctt tgcctctggt tattggaacg 601 aaagttacag cacgattacg tggtgttcat gatggtttgt tcactggaca aatagatgct 661 gtggatactc ttaatgctac ttatagagta acttttgata ggacagggct tggaacccat 721 accatccctg actatgaagt tctcagtaat gaacctcatg agacaatgcc aattgctgcc 781 tttggacaaa aacagcggcc ttctcgattt tttatgaccc caccacggtt acattatact 841 cctcctctcc agtcaccaat tatagataat gatcctttat taggacagtc gccgtggaga 901 agtaaaattt ctggctctga cactgaaaca ttaggtggtt ttccagtaga atttcttatc 961 caagtgacca gattatcaaa aattctcatg attaaaaagg aacatatcaa gaaattaagg 1021 gaaatgaaca cagaagcaga aaaattgaaa tcatattcca tgcccatcag cattgaattt 1081 cagcggagat atgcaacaat tgttctggag cttgaacagc tgaacaagga cctaaacaaa 1141 gttttgcata aagttcaaca gtattgctat gagcttgctc cagaccaggg gctccagcct 1201 gcagatcagc caacagatat gagacgcagg tgtgaggaag aagcacagga aattgttcgg 1261 catgcaaatt cctcaacagg acagccctgc gttgaaaatg aaaatctgac agacttaatt 1321 tccaggctta cagctatttt gttacaaatt aagtgtctag cagaaggagg agacctgaat 1381 tcctttgaat tcaaatcact tacagactca ttaaatgata tcaagagtac aatagacgct 1441 tctaatatca gttgctttca gaataatgta gaaatccatg ttgcacatat tcagagtggc 1501 ctgagccaga tgggaaactt acatgccttt gcagcaaata acaccaacag agactgagta 1561 aagatttcat tattccaact gcacgggaca ttgtttttga gaagttcttt tcctttatat 1621 aggcttccaa caccaaataa cctaactgct ggaaaacaag ggaaatttaa atctccaaat 1681 aaggcatttt aatagactgt actgcttctt aaaccagcat tgctgaccag cattatattt 1741 atttttcttt tattattcag atgcagtagc attgcttatg ttacatatgt ttatattcac 1801 aaatattttt aaactgaaat atctgaacat aatataattt cgtggaagaa tacattgacc 1861 atttttttta atgtgcatga attcaccgca acacatgcag acaactgctg caatggagag 1921 tatgaagaaa cctggtcttt ttattcatgt cggtggcagt gtggaaattc catccagaaa 1981 attacaactc cacttgattt agttgatcac catctcagtc ttcaaaagat aacatcatga 2041 ggtgtgggaa gtcctagttt taaggaaacc actgaaatat agatgggaaa tgtggacttt 2101 acaagtatat gttatatata cttgcaatgt gacatggttc tgtagatcat tttataataa 2161 taaatatttt aatttatcat aacatataaa agaaaccttt gttgtttgtt gaaagaaaat 2221 gaaggaacag ggggaaaaaa ggtgcaaaat gctaaatttc taaaaatgga tttggcatgt 2281 cttcccatca gttcaggtca aaagtgcatt gttgtgagat ttattaaaaa aaaaatgata 2341 acacactatt ttcatatttt tttgtttatt tgcacaactt ttaaaccaga ttactggtta 2401 aaatccaaca gtacacaatt tataaagtaa aaagatttta taaggaaaac aaatataata 2461 accagtgctg tgaaatgcag aagaaaggct tgttttggtt gtttttcttt tttaggaaaa 2521 cgctgcctaa aatgttaatc ttgtaaaaag tatgtatttg gaattttctt cgttttaata 2581 gaatattata aactcaaaat ataaattttt ttcaaatttg gagtttaaga tatagctgta 2641 gaggtggttt taattccttt agatgtctca taaaatgaga ctttttatat gttaatgtat 2701 aataaaactg aaacaagatt attttccatt tgaaattttt gtatagttta aaaaggcttc 2761 cgtattcttt gttggtattg tgccactgca gaactttagt gcagagttta tatttagcta 2821 aactgttatg ttaattaaga aatgcataaa tcttctattc ttaatatttg taattctaaa 2881 taaattgatc tatgaaaatt attattttc //