LOCUS AF188240 2890 bp mRNA linear HUM 27-SEP-2000
DEFINITION Homo sapiens A1U mRNA, complete cds.
ACCESSION AF188240
VERSION AF188240.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2890)
AUTHORS Davidson,J.D., Riley,B., Burright,E.N., Duvick,L.A., Zoghbi,H.Y.
and Orr,H.T.
TITLE Identification and characterization of an ataxin-1-interacting
protein: A1Up, a ubiquitin-like nuclear protein
JOURNAL Hum. Mol. Genet. 9 (15), 2305-2312 (2000)
PUBMED 11001934
REFERENCE 2 (bases 1 to 2890)
AUTHORS Davidson,J.D. and Orr,H.T.
TITLE Direct Submission
JOURNAL Submitted (21-SEP-1999) Laboratory Medicine and Pathology, Univ. of
Minnesota, Box 206 UMHC 515 Delaware St. SE, Minneapolis, MN 55455,
USA
FEATURES Location/Qualifiers
source 1..2890
/db_xref="H-InvDB:HIT000072967"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
CDS 279..2084
/function="interacts with ataxin-1"
/note="ataxin-1 interacting ubiquitin-like protein"
/codon_start=1
/product="A1U"
/protein_id="AAF80171.1"
/translation="MAEPSGAETRPPIRVTVKTPKDKEEIVICDRASVKEFKEEISRR
FKAQQDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTPQKAQDPAAATASSPSTP
DPASAPSTTPASPATPAQPSTSGSASSDAGSGSRRSSGGGPSPGAGEGSPSATASILS
GFGGILGLGSLGLGSANFMELQQQMQRHVMSNPEMLSQIMENPLVQDMMSNPDLMRHM
IMANPQMQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESIP
GGYNALRRMYTDIQEPMFSAAQEQFGNNPFSSLAGNSDSSSSQPLRTENREPLPNPWS
PSPPTSQAPGSGGEGTGGSGTSQVHPTVSNPFGINAASLGSGMFNSPEMQALLQQISE
NPQLMQNVISAPYMRSMMQTLAQNPDFAAQMMVNVPLFAGNPQLQEQLRLQLPVFLQQ
MQNPESLSILTNPRAMQALLQIQQGLQTLQTEAPGLVPSLGSFGISRTPAPSAGSNAG
STPEAPTSSPATPATSSPTGASSAQQQLMQQMIQLLAGSGNSQVQTPEVRFQQQLEQL
NSMGFINREANLQALIATGGDINAAIERLLGSQLS"
misc_feature 438..542
/inference="non-experimental evidence, no additional
details recorded"
/note="Region: ubiquitin-like domain"
BASE COUNT 615 a 921 c 746 g 608 t
ORIGIN
1 ccccaagagt agtagtagta gtagtaccat acgatcgtac tgaccacctg tcgtttaccc
61 agccctagac atgctgctac tgctattcca tggatcctag gtcacaccac cttaagcgcc
121 ggcgcagctg cggcccgccc gcccctcctc ctcctcggcc cgcccgaccg cccgccggcc
181 caccgccgcc gccgtaccgc ctcggctcgc cccggctctg ctccgggggg taagcccagt
241 ggcagttctg ggggttcctg ttcctccttt gcggcggcat ggcggagccg agcggggccg
301 agacgaggcc ccccattcgg gtcaccgtca agacccccaa ggacaaggag gaaattgtga
361 tctgcgatcg agcctcggtc aaggagttca aagaggaaat ctcccggagg tttaaggctc
421 agcaggatca gctggtcctg atcttcgcag gcaagatcct caaggatggg gacacactga
481 accagcacgg aatcaaggac gggctcactg tccatctggt catcaagacc cctcagaagg
541 ctcaagatcc agctgctgcc actgcttctt ccccctccac acctgaccct gcctcagcac
601 cctccaccac gcctgcttca cccgccaccc ctgcccagcc ctccacctct ggcagtgcct
661 cttcagatgc tggcagtgga agccggagga gcagtggtgg ggggccctct ccgggggctg
721 gggagggatc ccccagtgct actgcgtcca tactctctgg ctttgggggc atcctggggc
781 tgggcagcct aggcctgggc tctgccaact tcatggagct gcagcagcag atgcagcggc
841 acgtgatgtc caatcctgag atgctgtcac agatcatgga gaaccccctg gtccaggata
901 tgatgtctaa ccctgatctg atgcgtcaca tgattatggc caacccccag atgcagcagt
961 tgatggagcg gaaccctgag atcagccaca tgctcaataa ccctgaactc atgaggcaga
1021 caatggagct tgctcggaat ccagccatga tgcaagagat gatgcggaac caggaccggg
1081 ccctgagcaa ccttgagagc atccctggag ggtataatgc cctccgccgc atgtacacgg
1141 acatccagga gcccatgttc agtgctgccc aggaacagtt tggcaacaat cccttctctt
1201 ccctggccgg gaactccgac agctcatcct cccagcctct gcggactgag aatcgagagc
1261 ccctccctaa cccctggagc ccctcgcccc ccacctccca ggcccccggg tccggtgggg
1321 agggcaccgg aggatcgggg accagccagg tgcacccgac agtctcgaac ccctttggga
1381 tcaatgcggc tagcctgggg tcagggatgt tcaatagccc agaaatgcaa gccctcctcc
1441 agcagatctc tgagaacccc cagctgatgc agaatgtgat ctcagcaccc tacatgcgca
1501 gcatgatgca gacgcttgcc cagaaccccg actttgctgc tcagatgatg gtgaatgtgc
1561 cgctcttcgc ggggaacccc caactgcagg agcagctccg cctgcagctc ccagtcttcc
1621 tgcagcagat gcagaaccca gagtcactct ccatccttac caatccccga gccatgcagg
1681 cattgctgca gatccagcag ggactacaga ccttgcagac cgaggcccct gggctggtac
1741 ccagccttgg ctcctttggg atatcccgga ccccagcacc ctcagcaggc agcaacgcag
1801 ggtctacgcc cgaggccccc acttcctcac cagccacgcc agccacatct tctccaacag
1861 gggcttccag cgcccagcag caactcatgc agcagatgat ccagcttttg gctggaagtg
1921 gaaactcaca ggtgcagacg ccagaagtga gatttcagca gcagctggag cagctcaact
1981 ccatgggctt catcaatcgt gaggctaacc tgcaggccct gattgccaca ggaggggaca
2041 tcaacgcagc tatcgagaga ctgctgggct cccagctctc ctaatccctc ggcccatgcc
2101 tcctgcctct cccctccctc gatgtcagca ttcggttctt ctgtcaatcc ttaccctctg
2161 cagcttgtcc tcccttccgt cttctccctc atcctttcca aacagcaggg tgactttaga
2221 ggcatgggct ccaacccctt agctctgtct gagaattatg gttttactgc tacgtctcta
2281 acagactctt ctctcctggt ctccttgagc agtgctactt aaacagtttt cacagtttca
2341 ttgattgact ctacctcctt gccccacacc acttttgcaa tctttaaact ttcagtggct
2401 gtgcagagtc gagggaggaa ccagctctct ggtttactgg aacatagtct tccatctata
2461 ccactagggt tttgtcttat gtttactttt ggtaactctc ttccttcttt ttctccctac
2521 cccccaaccc ctagcccaac caatgctaga atttcttgct ctgaaggagg agcaggtgaa
2581 acaggtggta attttccttc tcggccccta ttctggttca ttcagcactt tttggtggga
2641 actgttggaa attccagggt aaggaggaag atgcctgttc tccctgtctg aagagggaga
2701 tgagacagct ctctggacag gaattaacaa acgctggagc agcccagagg aaattcgtgt
2761 gaaagaggag ggaatgagat tattcggagg aagggaatgg gggagacagc ctgagtaaaa
2821 ggcttggaag ttggaattag cagtggggag cagaagcact catagctctt ttaggcagaa
2881 gaatccaggc
//