LOCUS AF176797 1433 bp mRNA linear HUM 31-OCT-2000 DEFINITION Homo sapiens transcription factor VSX1 (VSX1) mRNA, complete cds. ACCESSION AF176797 VERSION AF176797.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1433) AUTHORS Semina,E.V., Mintz-Hittner,H.A. and Murray,J.C. TITLE Isolation and characterization of a novel human paired-like homeodomain-containing transcription factor gene, VSX1, expressed in ocular tissues JOURNAL Genomics 63 (2), 289-293 (2000) PUBMED 10673340 REFERENCE 2 (bases 1 to 1433) AUTHORS Semina,E.V. TITLE Direct Submission JOURNAL Submitted (10-AUG-1999) Pediatrics, University of Iowa, 140F EMRB, Iowa City, IA 52242, USA REFERENCE 3 (bases 1 to 1433) AUTHORS Semina,E.V. TITLE Direct Submission JOURNAL Submitted (31-OCT-2000) Pediatrics, University of Iowa, 140F EMRB, Iowa City, IA 52242, USA REMARK Sequence update by submitter COMMENT On Oct 31, 2000 this sequence version replaced AF176797.1. FEATURES Location/Qualifiers source 1..1433 /db_xref="H-InvDB:HIT000072673" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="20" /map="20p11-q11" gene 1..1433 /gene="VSX1" CDS 274..1371 /gene="VSX1" /note="contains paired-like homeobox; expressed in ocular tissues" /codon_start=1 /product="transcription factor VSX1" /protein_id="AAF37425.2" /translation="MTGRDSLSDGRTSSRALVPGGSPRGSRPRGFAITDLLGLEAELP APAGPGQGSGCEGPAVAPCPGPGLDGSSLARGALPLGLGLLCGFGTQPPAAARAPCLL LADVPFLPPRGPEPAAPLAPSRPPPALGRQKRSDSVSTSDEDSQSEDRNDLKASPTLG KRKKRRHRTVFTAHQLEELEKAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAK WRKREKRWGGSSVMAEYGLYGAMVRHCIPLPDSVLNSAEGGLLGSCAPWLLGMHKKSM GMIRKPGSEDKLAGLWGSDHFKEGSSQSESGSQRGSDKVSPENGLEDVAIDLSSSARQ ETKKVHPGAGAQGGSNSTALEGPQPGKVGAT" BASE COUNT 279 a 443 c 489 g 222 t ORIGIN 1 cctagaatgg gggtggggtg ggctggacag aagagaggag gagaaggagg tgactgaggg 61 gactgcagct gggtgggcgg taaccgaggg gaggggaact ggtggcgtcc ccatctcgcg 121 gggtccggaa cggcgacgcg cccgcgccca gctgattgga gcccttcagg cctcccgcgc 181 ccgaccggca gcccaatcct ataaagcttc ctctaagctg ggccctccgc aaacgggatc 241 cagagaggct cgcgccttgc ttgctaagga accatgaccg gccgggactc gctttccgac 301 gggcgcacta gcagcagggc gctggtgcct ggcggttccc ctaggggctc gcgcccccgg 361 ggcttcgcca tcacggacct gctgggcttg gaggccgagc tgccggcgcc cgctggccca 421 ggacagggat ctggctgcga gggtccggca gtcgcgccgt gcccgggccc ggggcttgac 481 ggctccagcc tggcgcgtgg ggccctaccg ctgggactcg gcctcctctg tggcttcggc 541 acgcagccgc cggcggccgc tcgagcaccc tgcctgctcc tagcggacgt gccgttcctg 601 ccgcccaggg gccccgagcc cgctgccccg ctggctccca gccgtccgcc gcctgcgctc 661 ggccgccaga agcgcagcga cagcgtctcc acgtccgatg aggacagcca gtctgaagac 721 aggaatgacc taaaggcatc ccccaccttg ggcaagagga agaagcggcg gcacaggaca 781 gttttcactg ctcaccagct ggaagagttg gagaaggcat tcagcgaggc ccactaccct 841 gatgtgtatg cccgagaaat gctggctgtg aaaactgagc tccccgaaga ccggatacag 901 gtctggtttc aaaaccgcag ggccaaatgg cgcaagcggg agaagcgctg gggcggcagc 961 agcgtgatgg ccgagtacgg gctgtacggg gccatggtgc gccactgcat cccgctgcca 1021 gactccgtgc tcaactccgc cgagggcggc ctgctgggct cctgcgcgcc ctggctcctg 1081 gggatgcata aaaaatccat ggggatgata aggaagccag gaagtgaaga taagttggca 1141 ggactctggg gctctgacca cttcaaagaa ggttctagcc agagtgagtc aggatcacag 1201 agaggctcag ataaagtgag ccctgagaat ggcttggaag atgtggctat tgacctctcc 1261 agctctgccc ggcaggagac caagaaagtg caccctgggg ctggtgctca aggaggctcc 1321 aactccacgg cactggaggg gccccagcca gggaaggtgg gagccacatg agacccacag 1381 gtcccactgt caaaggctga aaatgtgcat attcctcact ggcattttcc aaa //