LOCUS AF173987 3339 bp DNA linear BCT 12-DEC-1999 DEFINITION Rhodothermus marinus glucosamine-6-phosphate deaminase homolog gene, partial cds; mannosylglycerate synthase (mgs) gene, complete cds; DNA ligase gene, partial cds; and unknown genes. ACCESSION AF173987 VERSION AF173987.1 KEYWORDS . SOURCE Rhodothermus marinus DSM 4252 ORGANISM Rhodothermus marinus DSM 4252 Bacteria; Rhodothermota; Rhodothermia; Rhodothermales; Rhodothermaceae; Rhodothermus. REFERENCE 1 (bases 1 to 3339) AUTHORS Martins,L.O., Empadinhas,N., Marugg,J.D., Miguel,C., Ferreira,C., da Costa,M.S. and Santos,H. TITLE Biosynthesis of mannosylglycerate in the thermophilic bacterium Rhodothermus marinus. Biochemical and genetic characterization of a mannosylglycerate synthase JOURNAL J. Biol. Chem. 274 (50), 35407-35414 (1999) PUBMED 10585410 REFERENCE 2 (bases 1 to 3339) AUTHORS Marugg,J.D., Miguel,C. and da Costa,M.S. TITLE Direct Submission JOURNAL Submitted (30-JUL-1999) Departamento de Bioquimica, Universidade de Coimbra, Praca Marques de Pombal, Coimbra 3001-401, Portugal FEATURES Location/Qualifiers source 1..3339 /organism="Rhodothermus marinus DSM 4252" /mol_type="genomic DNA" /strain="DSM 4252" /type_material="type strain of Rhodothermus marinus" /db_xref="taxon:518766" CDS <1..660 /note="orfU" /codon_start=1 /transl_table=11 /product="unknown" /protein_id="AAF16903.1" /translation="DLLLVPVAVRLDVVDHPVGKVHVRGIDVDMLEEVFPHEVVIALR VGGRQSHVFVEVEGDDFGEVELTAAVAFDEAAVEAQRGASGGKAQHAVGFATDERGDE LVGAFAQRLVIREDLDQHGLTSRLADGRSINLRGKARKGKRRRYWKRSQNAAMTRGWA ITVVPGCANHGLSTHCAWHRCLGREVDWLVAQNGQLRGVFLKGWPVSFPEQNAGVAST S" CDS complement(<1..360) /note="orfR" /codon_start=1 /transl_table=11 /product="glucosamine-6-phosphate deaminase homolog" /protein_id="AAF16904.1" /translation="MLVEIFPDYETLSERAYELVATLIRRKPNCVLGFATGSTPLGLY RRLVEGYRRGELDFSKVVTFNLDEYVGLPPSHPQSYHHFMWENLFQHININPSNVHLP NGMVDDIEAHCDWYEEQI" gene 667..1860 /gene="mgs" CDS 667..1860 /gene="mgs" /codon_start=1 /transl_table=11 /product="mannosylglycerate synthase" /protein_id="AAF16905.1" /translation="MSLVVFPFKHEHPEVLLHNVRVAAAHPRVHEVLCIGYERDQTYE AVERAAPEISRATGTPVSVRLQERLGTLRPGKGDGMNTALRYFLEETQWERIHFYDAD ITSFGPDWITKAEEAADFGYGLVRHYFPRASTDAMITWMITRTGFALLWPHTELSWIE QPLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIPEGKAHR LYGGLDDLRTMLVECFAAIQSLQHEVVGQPAIHRQEHPHRVPVHIAERVGYDVEATLH RLMQHWTPRQVELLELFTTPVREGLRTCQRRPAFNFMDEMAWAATYHVLLEHFQPGDP DWEELLFKLWTTRVLNYTMTVALRGYDYAQQYLYRMLGRYRYQAALENGRGHPVPPRA ALSTA" CDS 1931..2857 /note="orfD" /codon_start=1 /transl_table=11 /product="unknown" /protein_id="AAF16906.1" /translation="MREQAVLENMRRLAHDLRRIREKQKRSLQEIHNETKIALELLQH FERTALYDHERYNPVYLRSFARTYASAIGIDPAAVLDAVELAFEGRYRNQLAVRFLGE EPLPEPEPETAPAEASTPEAAPERKPPQESETPLPLVTTPGGLERLERPARWKARVVG VIVVVMAAAGIWYLLRPAPAPPPEPLPVDTATVPAAATDTTPSVETPPVQVPVLGDTI TATVIAAFDKVDPIRVRIDRDLRRPYWIEQGDSMQFRFTERIILENQLDDIQLRLDGH PYPTDRRDAEGRIVITREQLQAYLDSLARGVQ" CDS 2878..>3339 /EC_number="6.5.1.2" /note="lig" /codon_start=1 /transl_table=11 /product="DNA ligase" /protein_id="AAF16907.1" /translation="METHTAPQTAEARLLEATHTLLQTVRQRDLEAIDRKEAEALAAR LREVLNQHAYRYYVLDNPLIPDADYDLLMQALRKLEARFPELVTPDSPTQRVGGPPLG RFEKVRHPEPLLSLNNAFGEEDVRVWYERCCRMLAERLGQPVQPAVTAELKI" BASE COUNT 641 a 1051 c 1073 g 574 t ORIGIN 1 gatctgctcc tcgtaccagt cgcagtgcgc ctcgatgtcg tcgaccatcc cgttgggaag 61 gtgcacgttc gagggattga tgttgatatg ttggaagagg ttttcccaca tgaagtggtg 121 atagctctga gggtgggagg gcggcagtcc cacgtattcg tcgaggttga aggtgacgac 181 tttggagaag tcgagctcac cgcggcggta gccttcgacg aggcggcggt agaggcccag 241 cggggtgctt ccggtggcaa agcccagcac gcagttgggt ttgcgacgga tgagcgtggc 301 gacgagctcg taggcgcgtt cgctcagcgt ctcgtaatcc gggaagatct cgaccagcat 361 ggtctgacaa gcaggttagc tgatggcagg tccatcaatc tcagaggaaa agcgaggaaa 421 ggcaagaggc gacgttactg gaaacgatcc caaaatgcag caatgacgcg cggctgggcg 481 atcacggtcg tgccaggatg cgctaatcac ggcctgtcga cacattgcgc ctggcaccgg 541 tgcttagggc gggaggtgga ttggcttgtt gcacaaaatg gacagctccg gggtgttttt 601 ctgaagggat ggcccgtatc tttccctgag caaaatgcgg gcgtagcgtc aaccagctga 661 atcgccatga gcctggtcgt ttttcccttc aagcacgaac accccgaggt gctgctgcac 721 aacgtgcgcg tggcggctgc tcatccccgg gtgcacgagg tgctctgcat cggatacgag 781 cgcgaccaga cctacgaggc cgtcgaacgg gccgcgcccg aaatctcgcg ggccacaggg 841 acgccggtgt cggtccggtt gcaggagcga ctgggcacgc tgcggcccgg caagggcgac 901 ggcatgaaca ccgcgctccg gtatttcctg gaagagacgc agtgggagcg catccacttc 961 tacgatgccg acatcaccag cttcgggccg gactggatca ccaaggccga agaggcggcc 1021 gatttcggct acgggctggt gcggcactac ttcccgcggg cctcaaccga cgcaatgatc 1081 acttggatga tcacgcgcac gggctttgcc ctgctctggc cgcataccga actgtcgtgg 1141 atcgagcagc cgctgggcgg cgagctgctc atgcggcgcg aagtggccgc catgctttac 1201 gaggatgaac gggtgcgacg gcggagcgac tggggcatcg acacactcta cacgttcgtt 1261 accgtgcagc agggcgtttc gatctacgag tgctacattc ctgagggcaa ggcgcatcgc 1321 ctctacggcg ggctcgacga cctgcgcacc atgctggtcg agtgttttgc cgccatccag 1381 agtctgcaac atgaggtcgt tggccagccg gccattcatc gccaggagca cccgcaccgc 1441 gtgccggtcc acattgccga acgcgtgggc tacgacgtgg aggccacgct gcatcgcctc 1501 atgcagcact ggacgccccg gcaggtggag ctgctggagc tttttaccac acccgtgcgc 1561 gaaggactgc gcacctgtca gcgtcgcccg gctttcaact tcatggacga gatggcctgg 1621 gcggccacct atcacgtgct gctcgagcac tttcagccgg gcgatccgga ctgggaggag 1681 ctgctcttca aactctggac gacccgcgtg ctcaactaca cgatgacggt cgcgctgcgg 1741 ggctacgact acgcgcagca gtatctctac cggatgctgg gacgctaccg ctatcaggcc 1801 gctctggaaa acggccgtgg tcatccggtc ccgccgcggg cggcactgtc gaccgcctga 1861 cgaaacacgg acgcaccggc cgggtgcaat actggaccaa tccagatgtt gctggcaaaa 1921 gctcctcacc atgcgtgaac aagcagtcct ggaaaatatg cgccggctgg cgcacgacct 1981 gcggcgcatc cgggaaaagc agaagcgctc gctgcaggag atccacaacg agaccaaaat 2041 cgcgctggag ctgctgcagc acttcgagcg tacggcgctc tacgatcacg agcgatacaa 2101 ccccgtttat ctgcgttcgt ttgcccggac gtatgcaagc gctatcggca tcgacccggc 2161 tgctgtgctg gatgcggtag aactggcctt cgaagggcgc tatcgcaacc agctggccgt 2221 tcggtttctg ggggaagaac cgctgcccga accggagccg gaaaccgcgc cggccgaagc 2281 gtcgacccct gaagccgcgc ctgagcgcaa gccgcctcaa gagtctgaaa caccgctacc 2341 cctggtgacc accccgggtg gtctggaacg gctggaacgc cctgcgcgct ggaaggcccg 2401 ggtcgtgggc gtcatcgtgg tggtgatggc ggccgcaggc atctggtatc tgctgcgacc 2461 ggctccggca ccacctccgg agccgctgcc cgtggatacg gccacggttc cggctgctgc 2521 gaccgatacg acaccttcgg ttgaaacgcc ccccgttcag gtgcccgtgc tgggcgatac 2581 gatcacggcc accgtcattg ccgccttcga caaggtcgat cccatccggg tccggatcga 2641 tcgcgacctg cgccgcccct actggatcga gcagggcgac tcgatgcaat ttcggtttac 2701 cgaacgcatc atccttgaaa accagctgga cgacatccag ctgcggctgg acggccatcc 2761 gtatcccacc gaccgccggg atgccgaggg ccgcattgtc atcacccggg agcagttgca 2821 ggcttacctg gattcgctgg cacgaggggt ccagtagcag caaaaccaga gcacaccatg 2881 gagacgcaca ccgcaccgca aaccgccgaa gcacgcctgc tggaggccac acacacgctg 2941 ttgcaaactg tccgacagcg cgacctggaa gccatcgacc gcaaggaggc cgaggcgctg 3001 gcggcccggc tccgggaagt gctcaaccaa cacgcctacc gctattacgt actggacaac 3061 ccgctcatcc cggacgcgga ctacgacctg ctcatgcagg cgcttcggaa gctcgaggcg 3121 cgtttcccgg agctggtcac gcccgactca cccacgcagc gcgtgggagg accgccgctg 3181 ggacgcttcg aaaaggtgcg ccatccggag ccgctccttt cgctcaacaa cgcttttggc 3241 gaggaagacg tgcgcgtctg gtacgagcgc tgttgccgga tgctggccga gcgactcggg 3301 cagccggtgc agccggccgt caccgccgag ctgaagatc //