LOCUS AF172398 3652 bp mRNA linear HUM 20-DEC-2016
DEFINITION Homo sapiens junctional adhesion molecule-1 mRNA, complete cds.
ACCESSION AF172398
VERSION AF172398.3
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3652)
AUTHORS Naik,U.P., Naik,M.U., Eckfeld,K., Martin-DeLeon,P. and Spychala,J.
TITLE Characterization and chromosomal localization of JAM-1, a platelet
receptor for a stimulatory monoclonal antibody
JOURNAL J. Cell. Sci. 114 (Pt 3), 539-547 (2001)
PUBMED 11171323
REFERENCE 2 (bases 1 to 3652)
AUTHORS Naik,U.P., Naik,M.U., DeLeon,P. and Spychala,J.
TITLE Direct Submission
JOURNAL Submitted (26-JUL-1999) Biological Sciences, University of
Delaware, 337 Wolf Hall, Newark, DE 19716, USA
REFERENCE 3 (bases 1 to 3652)
AUTHORS Naik,U.P., Naik,M.U., DeLeon,P. and Spychala,J.
TITLE Direct Submission
JOURNAL Submitted (26-FEB-2001) Biological Sciences, University of
Delaware, 337 Wolf Hall, Newark, DE 19716, USA
REMARK Sequence update by submitter
REFERENCE 4 (bases 1 to 3652)
AUTHORS Naik,U.P., Naik,M.U., DeLeon,P. and Spychala,J.
TITLE Direct Submission
JOURNAL Submitted (20-DEC-2016) Biological Sciences, University of
Delaware, 337 Wolf Hall, Newark, DE 19716, USA
REMARK Sequence update by database staff to remove vector contamination
COMMENT On Dec 20, 2016 this sequence version replaced AF172398.2.
FEATURES Location/Qualifiers
source 1..3652
/db_xref="H-InvDB:HIT000072430"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="1"
/map="1q21.2-q21.3"
/note="major transcript"
CDS 61..960
/note="JAM-1; platelet adhesion molecule PAM-1; cell
adhesion molecule"
/codon_start=1
/product="junctional adhesion molecule-1"
/protein_id="AAD48877.1"
/translation="MGTKAQVERKLLCLFILAILLCSLALGSVTVHSSEPEVRIPENN
PVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTRE
DTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSP
PSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGY
GTPMTSNAVRMEAVERNVGVIVAAVLVTLILLGILVFGIWFAYSRGHFDRTKKGTSSK
KVIYSQPSARSEGEFKQTSSFLV"
regulatory 3616..3621
/regulatory_class="polyA_signal_sequence"
BASE COUNT 863 a 828 c 927 g 1034 t
ORIGIN
1 cggagctgtg tctgttccca ggagtccttc ggcggctgtt gtgtcagtgg cctgatcgcg
61 atggggacaa aggcgcaagt cgagaggaaa ctgttgtgcc tcttcatatt ggcgatcctg
121 ttgtgctccc tggcattggg cagtgttaca gtgcactctt ctgaacctga agtcagaatt
181 cctgagaata atcctgtgaa gttgtcctgt gcctactcgg gcttttcttc tccccgtgtg
241 gagtggaagt ttgaccaagg agacaccacc agactcgttt gctataataa caagatcaca
301 gcttcctatg aggaccgggt gaccttcttg ccaactggta tcaccttcaa gtccgtgaca
361 cgggaagaca ctgggacata cacttgtatg gtctctgagg aaggcggcaa cagctatggg
421 gaggtcaagg tcaagctcat cgtgcttgtg cctccatcca agcctacagt taacatcccc
481 tcctctgcca ccattgggaa ccgggcagtg ctgacatgct cagaacaaga tggttcccca
541 ccttctgaat acacctggtt caaagatggg atagtgatgc ctacgaatcc caaaagcacc
601 cgtgccttca gcaactcttc ctatgtcctg aatcccacaa caggagagct ggtctttgat
661 cccctgtcag cctctgatac tggagaatac agctgtgagg cacggaatgg gtatgggaca
721 cccatgactt caaatgctgt gcgcatggaa gctgtggagc ggaatgtggg ggtcatcgtg
781 gcagccgtcc ttgtaaccct gattctcctg ggaatcttgg tttttggcat ctggtttgcc
841 tatagccgag gccactttga cagaacaaag aaagggactt cgagtaagaa ggtgatttac
901 agccagccta gtgcccgaag tgaaggagaa ttcaaacaga cctcgtcatt cctggtgtga
961 gcctggtcgg ctcaccgcct atcatctgca tttgccttac tcaggtgcta ccggactctg
1021 gcccctgatg tctgtagttt cacaggatgc cttatttgtc ttctacaccc cacagggccc
1081 cctacttctt cggatgtgtt tttaataatg tcagctatgt gccccatcct ccttcatgcc
1141 ctccctccct ttcctaccac tgctgagtgg cctggaactt gtttaaagtg tttattcccc
1201 atttctttga gggatcagga aggaatcctg ggtatgccat tgacttccct tctaagtaga
1261 cagcaaaaat ggcgggggtc gcaggaatct gcactcaact gcccacctgg ctggcaggga
1321 tctttgaata ggtatcttga gcttggttct gggctctttc cttgtgtact gacgaccagg
1381 gccagctgtt ctagagcggg aattagaggc tagagcggct gaaatggttg tttggtgatg
1441 acactggggt ccttccatct ctggggccca ctctcttctg tcttcccatg ggaagtgcca
1501 ctgggatccc tctgccctgt cctcctgaat acaagctgac tgacattgac tgtgtctgtg
1561 gaaaatggga gctcttgttg tggagagcat agtaaatttt cagagaactt gaagccaaaa
1621 ggatttaaaa ccgctgctct aaagaaaaga aaactggagg ctgggcgcag tggctcacgc
1681 ctataatccc agaggctgag gcaggcggat cacctgaggt cgggagttca ggatcagcct
1741 gaccaacatg gagaaaccct gctgaaaata caaagttagc caggcatggt ggtgcatgcc
1801 tgtagtccca gctgctcagg agcctggcaa caagagcaaa actccagctc aaaaaaaaaa
1861 aaagaaagaa aagaaagctg gagctggtgg cttgggccat cacccttccc ttggctggaa
1921 ctactggaca gacccttttg agatgtgcct gtggtgctgt ggagatgtgt gtagtggtct
1981 tagctctttg ttgagcttgt gtgtgtgttg tgtagtctta gctgtatgct gaaattgggc
2041 gtgtgttgga gggcttctta gctctttggt gagattgtat ttctatgtgt ttgtatcagc
2101 tgaatgttgc tggaaataaa accttggttt gtcaaggctc ttttttgtgg gaagtaagta
2161 ggggaaaagg tctttgaggg ttcctaggct cctttgtaca acaggaaaat gcctcaaagc
2221 cttgcttccc agcaacctgg ggctggttcc cagtgcctgg tcctgcccct tcctggttct
2281 tatctcaagg cagagctttt gaatttcagg ccttcattcc agagcctctt gtggccaggc
2341 cttcctttgc tggaggaagg tacacagggt gaagctgatg ctgtacttgg gggatctcct
2401 tggcctgttc caccaagtga gagaaggtac ttactcttgt acctcctgtt cagccaggtg
2461 cattaacaga cctccctaca gctgtaggaa ctactgtccc agagctgagg caaggggatt
2521 tctcaggtca tttggagaac aagtgcttta gtagtagttt aaagtagtaa ctgctactgt
2581 atttagtggg gtggaattca gaagaaattt gaagaccaga tcatgggtgg tctgcatgtg
2641 aatgaacagg aatgagccgg acagcctggc tgtcattgct ttcttcctcc ccatttggac
2701 ccttctctgc ccttacattt ttgtttctcc atctaccacc atccaccagt ctatttatta
2761 acttagcaag aggacaagta aagggccctc ttggcttgat tttgcttctt tctttctgtg
2821 gaggatatac taagtgcgac tttgccctat cctatttgga aatccctaac agaattgagt
2881 tttctattaa ggatccaaaa agaaaaacaa aatgctaatg aagccatcag tcaagggtca
2941 catgccaata aacaataaat tttccagaag aaatgaaatc caactagaca aataaagtag
3001 agcttatgaa atggttcagt aaagatgagt ttgttgtttt ttgttttgtt ttgttttgtt
3061 tttttaaaga cggagtctcg ctcttgtcac ccaggctgga gtgcagtggt atgatcttgg
3121 ctcactgtaa cctccgcctc ccgggttcaa gccattctcc tgcctcagtc tcctgagtag
3181 ctgggattgc gggtgcgtgc caccatgcct ggctaatttt tgtgttttta gtagagacag
3241 ggtttcacca tgttggtcgg gctggtctca ggctcctgac ctcttgatcc gcctgccttg
3301 gcctcccaaa gtgatgggat tacagatgtg agccaccgtg cctagccaag gatgagattt
3361 ttaaagtatg tttcagttct gtgtcatggt tggaagacag agtaggaagg atatggaaaa
3421 ggtcatgggg aagcagaggt gattcatggc tctgtgaatt tgaggtgaat ggttccttat
3481 tgtctaggcc acttgtgaag aatatgagtc agttattgcc agccttggaa tttacttctc
3541 tagcttacaa tggacctttt gaactggaaa acaccttgtc tgcattcact ttaaaatgtc
3601 aaaactaatt tttataataa atgtttattt tcacattgaa aaaaaaaaaa aa
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