LOCUS AF166125 3950 bp mRNA linear HUM 26-JUL-2016
DEFINITION Homo sapiens selenoprotein N mRNA, partial cds.
ACCESSION AF166125
VERSION AF166125.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3950)
AUTHORS Lescure,A., Gautheret,D., Carbon,P. and Krol,A.
TITLE Novel selenoproteins identified in silico and in vivo by using a
conserved RNA structural motif
JOURNAL J. Biol. Chem. 274 (53), 38147-38154 (1999)
PUBMED 10608886
REFERENCE 2 (bases 1 to 3950)
AUTHORS Lescure,A., Gautheret,D., Carbon,P. and Krol,A.
TITLE Direct Submission
JOURNAL Submitted (07-JUL-1999) UPR 9002 - IBMC, CNRS, 15, rue Rene
Descartes, Strasbourg 67084, France
FEATURES Location/Qualifiers
source 1..3950
/db_xref="H-InvDB:HIT000072278"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
CDS <1..1417
/codon_start=2
/transl_except=(pos:1028..1030,aa:Sec)
/product="selenoprotein N"
/protein_id="AAF21430.1"
/translation="YISPEEFKPIAEKLTGSTPAASYEEEELPPDPSEETLTIEARFQ
PLLPETMTKSKDGFLGVSRLALSGLRNWTAAASPSAVFATRHFQPFLPPPGQELGEPW
WIIPSELSMFTGYLSNNRFYPPPPKSKEVIIHRLLSMFHPRPFVKTRFAPQGAVACLT
AISDFYYTVMFRIHAEFQLSEPPDFPFWFSPAQFTGHIILSKDATHVRDFRLFVPNHR
SLNVDMEWLYGASESSNMEVDIGYIPQMELEATGPSVPSVILDEDGSMIDSHLPSGEP
LQFVFEEIKWQQELSWEEAARRLEVAMYPFKKVSYLPFTEAFDRAKAENKLVHSILLW
GALDDQSCUGSGRTLRETVLESSPILTLLNESFISTWSLVKELEELQNKQENSSHQKL
AGLHLEKYSFPVEMMICLPNGTVVHHINANYFLDITSVKPEEIESNLFSFSSTFEDPS
TATYMQFLKEGLRRGLPLLQP"
misc_feature 2514..2574
/note="selenocysteine insertion sequence (SECIS) element
allows translation of UGA as selenocysteine."
BASE COUNT 801 a 1281 c 1007 g 861 t
ORIGIN
1 gtacatcagc cctgaggagt tcaaacccat tgctgagaag ctaacagggt caactcccgc
61 ggccagctac gaggaggagg agttgccccc tgaccctagc gaggagacgc tcaccataga
121 agcccgattc cagcctctgc tcccggagac catgaccaag agcaaagatg gcttcctagg
181 ggtctcccgc ctcgccctgt ccggcctccg aaactggaca gccgccgcct caccaagtgc
241 agtgtttgcc acccgccact tccagccctt ccttcccccg ccaggccagg agctgggtga
301 gccctggtgg atcatcccca gtgagctgag catgttcact ggctacctgt ccaacaaccg
361 cttctatcca ccgccgccca agagcaagga ggtcatcatc caccggctcc tgagcatgtt
421 ccaccctcgg ccctttgtga agacccgctt tgcccctcag ggagctgtgg cctgcctgac
481 tgccatcagc gacttctact acactgtgat gttccggatc catgccgagt tccagctcag
541 tgagccgccc gacttcccct tttggttctc ccctgctcag ttcaccggcc acatcatcct
601 ctccaaagac gccacccacg tccgcgactt ccggctcttc gtgcccaacc acaggtctct
661 gaatgtggac atggagtggc tttacggggc cagtgaaagc agcaacatgg aggtggacat
721 cggctacata ccccagatgg agctggaggc cacgggcccc tctgtgccct ccgtgatcct
781 ggatgaggat ggcagcatga tcgacagcca cctgccctca ggggagcccc tgcagtttgt
841 gtttgaggag atcaagtggc agcaggagct gagctgggag gaggctgccc ggcgcctgga
901 ggtggccatg taccccttca agaaggtctc ctacttgccg ttcactgagg ccttcgaccg
961 agccaaggct gagaacaagc tggtgcactc aatcctgctg tggggggccc tggatgacca
1021 gtcctgctga ggttcagggc ggactctccg ggagactgtc ctggaaagtt cgcccatcct
1081 caccctgctc aacgagagct tcatcagcac ctggtccctg gtgaaggagc tggaggaact
1141 gcagaacaaa caggagaact cgtcccacca gaagctggct ggcctgcacc tggagaagta
1201 cagcttcccc gtggagatga tgatctgcct gcccaatggc accgtggtcc atcacatcaa
1261 tgccaactac ttcttggaca tcacctccgt gaagcccgag gaaatcgaga gcaatctctt
1321 cagcttctca tccacctttg aagacccgtc cacggccacc tacatgcagt tcctgaagga
1381 gggactccgg cgtggcctgc ccctcctcca gccctagagt gcctggacgg gatctgatgc
1441 acaggccccc acgcctcaga gccagagtgg tcctcagccc atttcagact gcagatgccg
1501 cccactccca ccccactcct aggctgcctt ggagggtaca agatccactg agggtggcca
1561 ccacagcctt ggctccatgg tggcgggtag acaagggatg cctgggctga ctgggcagag
1621 gaacctctag ctctgactgt cactcggctc tccctaccca tttggctctg gaagctgctt
1681 ggccccccca gatcagggcc tgggtgaact ccctggacct ttcctagcca gccgcacagt
1741 ctaggccctt gtggggtgaa gaatggaggg aggagcaggc taggaagacg gggccaccac
1801 cctctccttg ctttcagccc ttcccacagg aaacatcaag aagccccagc caggaggggc
1861 caggctgcca aggcggctcc cctgtttatc tagagccttc gttcctggcc ataccccgga
1921 ctgccctcct gtgcctgatg tccccagctg gggtcagtct caacaggagc cagtcttctg
1981 gagcctctgg gcagaaccct ccatcagagt ggaaatcaga cgggaccccc tgcagcttcc
2041 ctgaccacgc cactgaccag ctatctgggg aagtttactg tgaaggggtt tctgccttta
2101 gcaatggggt tcactaaggg ggttcccgag gcccagggcc aaggcactcc caccgcctac
2161 cttagcacag ggtctctgca ggactgcggg agccagcgct cctgccgccc ctcttgcccc
2221 tcagaccttg catccacaga agcacaaccc agccaaacac cacagccttc tccagagccg
2281 gcactgtccc ggcaaccagg ggtgccccag gctagctctt ctacctctgg ggcaccacgg
2341 actccccttg gccactcttg ggactttggt ccacgtcctg agccactgac cacggccagt
2401 ctctcttttt atatgtgcag aaaagtgttt ttacacaaac tttctcatgg tttgtaggta
2461 tttttttata accccagtgc tgaggagaaa ggaggggcag tggcttcccc ggcagcagcc
2521 ccatgatggc tgaatccgaa atcctcgatg ggtccagctt gatgtctttg cagctgcacc
2581 tatgggaaga agtagtcctc tcttccttct cctcttcagc tttttaaaaa cagtcctcag
2641 aggatccatg atccccagca ctgtcccatc ctccacaaag gcccacaggc atgcctgtac
2701 tctctttcat taaggtcttg aagtcaggct gccccctccc cagcccccag ttctctcccc
2761 accccctcac cccacccggg gctcactcag cctggcagag gaagaaggaa ggcagacatc
2821 tccgcagcca ctcctgggcc ttttatgtgc cgagttaccc cacttgcctt gggcgtgtcc
2881 actgagcctt ccccagccag tcttgttctc aattttgttt tgttttgttt tgttttgaga
2941 cggagtcttg ctctgtcacc caggctggag tgctatggct cgatcttggc tcactgcaac
3001 ctccacctcc caggttcaag caattctctt gccccagcct cccgagtagc tgggattaca
3061 ggtgcatgcc accatggctg gctaattttt gtatttttag tagagatggg gtttcaccat
3121 attggtcagg ctgatctgga actcctgacc tcaggtgatc cacctgcctc agcctcccaa
3181 agtgctggga ttacaggcgt gagcaatcgt gcccagcctt gttcttaatt ttgtatcatc
3241 cagtcatcgc taatattaca cgcaccttct cacttaatcc tcacgacaag cctgtgaggc
3301 agatgctcat tgttcccatc ttgatgaaac ttgagtctca gggaagtgaa gtgacttgcc
3361 cagggtcact caggtagagt tgagattcaa acccacatgt ggctccaaag tctgcatctg
3421 gatttggggg tgttttttgg catggcaccc tcacctctct ccctgcctgt tttccccaaa
3481 gtggaaagga aggcctttca aaccagagtg tctcactccc ctctgacctc cagaccagat
3541 ggggcatgag ccagccagct cagccaggct ccctgtgtcc tgggaggaag tgtccccatc
3601 ccccatgccc cttatgggga gggagggcgt ctgatgctct ctctctgcct cccccccatc
3661 ctgtcaggca caggtgacgg gggcagccca tgcgagccct tctcctgctg ctctgggagg
3721 gccagttcca cattgagcca gcctggtccc atggaaaatg atggcctggg ctttctgagg
3781 ccttatctga tgcctctgca gttcatgtcc cccaccaggc ctcgaggctc agggtgggag
3841 agggccccgg gctgccctgt cactcctcta acacttccct cccctatccc caacatgccc
3901 tgtaataaaa ttagagaaga ctaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//