LOCUS AF152526 2637 bp mRNA linear HUM 14-JUL-1999
DEFINITION Homo sapiens protocadherin gamma C5 short form protein
(PCDH-gamma-C5) variable region sequence, complete cds.
ACCESSION AF152526
VERSION AF152526.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2637)
AUTHORS Wu,Q. and Maniatis,T.
TITLE A striking organization of a large family of human neural
cadherin-like cell adhesion genes
JOURNAL Cell 97 (6), 779-790 (1999)
PUBMED 10380929
REFERENCE 2 (bases 1 to 2637)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Human protocadherin genes
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 2637)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Direct Submission
JOURNAL Submitted (19-MAY-1999) Department of Molecular and Cellular
Biology, Harvard University, 7 Divinity Avenue, Cambridge, MA
02138, USA
FEATURES Location/Qualifiers
source 1..2637
/db_xref="H-InvDB:HIT000071830"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="5"
/map="5q31"
gene 1..2637
/gene="PCDH-gamma-C5"
CDS 1..2637
/gene="PCDH-gamma-C5"
/function="cell-cell adhesion"
/note="member of the cadherin superfamily"
/codon_start=1
/product="protocadherin gamma C5 short form protein"
/protein_id="AAD43786.1"
/translation="MGPKTLPQLAGKWQVLCMLSLCCWGWVSGQLRYSVVEESEPGTL
VGNVAQDLGLKMTDLLSRRLQLGSEENGRYFSLSLMSGALAVNQKIDRESLCGASTSC
LLPVQVVTEHPLELIRVEVEILDLNDNSPSFATPEREMRISESAASGARFPLDSAQDP
DVGTNTVSFYTLSPNSHFSLNVKTLKDGKPFPELVLEQQLDREAQARHQLVLTAVDGG
TPARSGTTLISVIVLDINDNAPTFQSSVLRVGIPENAPIGTLLLRLNATDPDEGTNGQ
LDYSFGDHTSEAVRNLFGLDPSSGAIHVLGPIDFEESRFYEIHARARDQGQPAMEGHC
VIQVDVGDVNDNAPEVLLASLANPVLESTPVGTVVGLFNVRDRDSGRNGEVSLDISPD
LPFQIKPSENHYSLLTSQPLDREATSHYIIELLASDAGSPSLHKHLTIRLNISDVNDN
APRFNQQLYTAYILENRPPGSLLCTVAASDPDTGDNARLTYSIVGNQVQGAPASSFVY
VNPEDGRIFAQRTFDYELLQMLQIVVGVRDSGSPPLHANTSLHVFVLDENDNAPAVLH
PRPDWEHSAPQRLPRSAPPGSLVTKVTAVDADAGHNAWLSYSLLPQSTAPGLFLVSTH
TGEVRTARALLEDDSDTQQVVVLVRDNGDPSLSSTATVLLVLEDEDPEEMPKSSDFLI
HPPERSDLTLYLIVALATVSLLSLVTFTFLSAKCLQGNADGDGGGGQCCRRQDSPSPD
FYKQSSPNLQVSSDGTLKYMEVTLRPTDSQSHCYRTCFSPASDGSDFTFLRPLSVQQP
TALALEPDAIRSRSNTLRERSQVRGSAPPRATPGGGTGEAARPHKGLNLHPLLSGRLG
RWLRSTRFSGSLDRLRETRVAD"
BASE COUNT 554 a 784 c 720 g 579 t
ORIGIN
1 atggggccca agacactccc acagctcgct gggaaatggc aagtgctgtg catgttgtcc
61 ttgtgctgct ggggctgggt gtctgggcag cttcgttact cagtggtgga ggagtctgag
121 ccggggacgc tggtggggaa tgttgctcag gatctgggct taaagatgac agatctgttg
181 agccggcggc tgcaattggg ctctgaggag aatgggcgct atttttccct gagcttgatg
241 agtggtgccc tggcagtgaa tcaaaagatt gaccgagaaa gcctatgtgg agccagcacc
301 agctgcctgc tgccagtgca ggtggtgact gaacaccccc tggagctaat ccgtgtagag
361 gtagagatcc tggatctcaa tgacaactct cctagctttg ccacccctga gcgagagatg
421 cgcatctcag aatcagcagc atctggggca cgattcccac tggacagtgc ccaggatccg
481 gatgtgggca ccaatactgt gagcttttac actctaagcc ccaacagcca cttctctctg
541 aatgtgaaga ccctaaaaga tgggaagcca ttcccagagc tggtgctaga gcagcagctg
601 gatcgtgaag cccaggcaag acatcagctg gtgcttactg ctgtggatgg ggggacccca
661 gcccgctcag ggaccaccct tatctctgtc atcgtgctgg acatcaatga taatgctcca
721 accttccaat cctcagttct acgtgtggga atcccagaga atgcacccat tggtactctg
781 ctgctccgcc tcaatgccac tgatccagac gagggcacca acggccaact agactattct
841 tttggagacc acacatctga ggcagtgcgg aacctctttg gcctagaccc tagcagtggg
901 gcaatccatg tgttgggtcc catagacttt gaggagtcac gtttctatga aattcatgca
961 agagcccgtg accagggaca gcctgccatg gagggccact gtgtgattca agtggatgtg
1021 ggggatgtca atgacaatgc cccagaggtg ctattggcct ctttggccaa ccctgtccta
1081 gagagcacac cagtgggcac agtagtgggg ttgtttaatg tgcgagaccg ggactcaggt
1141 agaaatggtg aagtgagcct tgatatctct ccggacctgc catttcagat taagccttct
1201 gagaaccact actcgctgct aaccagccag cctttggacc gggaggccac atcccactat
1261 atcatcgagc tgctggccag cgatgctggt tcaccttccc tacacaaaca tctcaccatc
1321 aggctcaaca tttcagatgt caatgacaat gcaccccgct tcaaccagca gctttacact
1381 gcttacatcc tagaaaaccg gcctccgggc tcccttcttt gcactgtggc tgcctcagat
1441 ccagacactg gggataatgc ccgcctcacc tactccattg taggaaatca ggttcaggga
1501 gccccagcct cctcctttgt gtatgtcaac ccagaggatg gacggatctt tgcccagcgt
1561 acctttgact atgaattgct gcagatgctg cagattgtgg tgggggttcg agactccggc
1621 tctcccccat tgcatgccaa cacatctctg catgtgtttg tcctagacga gaatgataat
1681 gccccagctg tgctgcaccc acggccagac tgggaacact cagcccccca gcgtctccct
1741 cgctctgctc ctcctggctc cttggtcacc aaggtgacag ccgtggatgc tgatgcaggc
1801 cacaatgcgt ggctctccta ctcactgttg ccacagtcca cagccccagg actgttcctc
1861 gtgtctacac acactggtga ggtgcgcaca gcccgggcct tactggagga tgactctgac
1921 acccagcagg tggtggtcct ggtgagggac aatggtgacc cttcactctc ctccacagcc
1981 acagtgctgc tggttctgga ggatgaggac cctgaggaaa tgcccaaatc cagtgacttc
2041 ctcatacacc ctcctgagcg ttcagacctt accctttacc tcattgtggc tctagcgacc
2101 gtcagtctct tatccctagt caccttcacc tttctgtcag cgaagtgcct tcagggaaac
2161 gcagacgggg acgggggtgg agggcagtgc tgcaggcgcc aggactcacc ctccccggac
2221 ttctataagc agtccagccc caacctgcag gtgagctcgg acggcacgct caagtacatg
2281 gaggtgacgc tgcggcccac agactcgcag agccactgct acaggacgtg cttttcaccg
2341 gcctcggacg gcagtgactt cacttttcta agacccctca gcgttcagca gcccacagct
2401 ctggcgctgg agcctgacgc catccggtcc cgctctaata cgctgcggga gcggagccag
2461 gtgaggggct cggcgccgcc ccgggcgacc cctgggggcg gcactggaga agccgcccgt
2521 cctcataagg gattgaactt gcatccactc ctctccggcc ggcttggtcg ctggctgcgc
2581 tccacccgat tctcgggatc attggaccgt ttgcgcgaaa ccagagtggc cgattaa
//