LOCUS AF152520 2412 bp mRNA linear HUM 14-JUL-1999
DEFINITION Homo sapiens protocadherin gamma B4 short form protein
(PCDH-gamma-B4) variable region sequence, complete cds.
ACCESSION AF152520
VERSION AF152520.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2412)
AUTHORS Wu,Q. and Maniatis,T.
TITLE A striking organization of a large family of human neural
cadherin-like cell adhesion genes
JOURNAL Cell 97 (6), 779-790 (1999)
PUBMED 10380929
REFERENCE 2 (bases 1 to 2412)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Human protocadherin genes
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 2412)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Direct Submission
JOURNAL Submitted (19-MAY-1999) Department of Molecular and Cellular
Biology, Harvard University, 7 Divinity Avenue, Cambridge, MA
02138, USA
FEATURES Location/Qualifiers
source 1..2412
/db_xref="H-InvDB:HIT000071824"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="5"
/map="5q31"
gene 1..2412
/gene="PCDH-gamma-B4"
CDS 1..2412
/gene="PCDH-gamma-B4"
/function="cell-cell adhesion"
/note="member of the cadherin superfamily"
/codon_start=1
/product="protocadherin gamma B4 short form protein"
/protein_id="AAD43780.1"
/translation="MGSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKG
SVVGNLATDLGFSVQELPTRKLRVSSEKPYFTVSAESGELLVSSRLDREEICGKKPAC
ALEFEAVAENPLNFYHVNVEIEDINDHTPKFTQNSFELQISESAQPGTRFILGSAHDA
DIGSNTLQNYQLSPSDHFSLINKEKSDGSKYPEMVLKTPLDREKQKSYHLTLTALDFG
APPLSSTAQIHVLVTDANDNAPVFSQDVYRVSLSENVYPGTTVLQVTATDQDEGVNAE
ITFSFSEASQITQFDLNSNTGEITVLNTLDFEEVKEYSIVLEARDGGGMIAQCTVEVE
VIDENDNAPEVIFQSLPNLIMEDAELGTHIALLKVRDKDSRHNGEVTCKLEGDVPFKI
LTSSRNTYKLVTDAVLDREQNPEYNITVTATDRGKPPLSSSSSITLHIGDVNDNAPVF
SQSSYIVHVAENNPPGASISQVRASDPDLGPNGQVSYCIMASDLEQRELSSYVSISAE
SGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVDDRNDNAPRVLYPALG
PDGSALFDMVPHAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEV
RTARALGDRDAVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLPDITDRPDPSDL
QAELQFYLVVALALISVLFLVAMILAIALRLRRSSSPASWSCFQPGLCVKSESVVPPN
YSEGTLPYSYNLCVAHTGKTEFNFLKCSEQLSSGQDILCGDSSGALFPLCNSSELTSH
QVSFL"
BASE COUNT 569 a 646 c 646 g 551 t
ORIGIN
1 atggggagcg gcgccgggga gctgggccgg gctgagaggc tgccagtgct ctttctcttc
61 ctgctgtctt tgttctgccc ggcgctctgt gagcagatcc gctacaggat tcccgaggaa
121 atgcccaagg gctccgtagt ggggaacctc gccacggacc tggggttcag cgtccaggag
181 ttaccgactc gaaaactgcg cgtcagttcg gagaagcctt acttcaccgt gagcgcagag
241 agcggggagt tgcttgtgag cagcaggcta gacagggagg agatatgcgg gaagaagcca
301 gcttgtgctc tggaatttga ggctgttgct gaaaatccac tgaactttta tcacgtgaat
361 gtggagatcg aggacattaa tgaccacacg ccaaaattca cgcaaaattc ctttgagctg
421 caaataagtg agtctgcaca gcctggcaca cgatttatat taggatctgc ccatgatgcg
481 gatattggta gcaacacact gcagaattac caactcagtc ccagtgatca tttctcactg
541 ataaataaag agaaatcaga tggcagtaaa taccctgaga tggtattgaa gacacctttg
601 gacagagaaa agcagaaatc ctaccacttg actttgactg ccttggactt tggagctcca
661 cccctaagca gcactgcaca gatacacgtt ctagtgactg atgccaatga taatgctcca
721 gtgttcagtc aagacgtata cagggtgagc ctttcagaaa acgtgtaccc ggggaccacg
781 gtgctacagg tgactgccac ggaccaggat gagggtgtca atgccgagat tactttctct
841 ttcagtgaag ctagccagat cacccaattt gacctgaact ctaacaccgg ggaaattact
901 gttttaaata cattagattt tgaagaagtc aaagaatatt ccatagtttt ggaagcaagg
961 gacggtggag gaatgattgc gcaatgcaca gtggaggtag aagtcataga tgaaaatgac
1021 aacgccccag aagtgatatt ccagtctcta cccaacctaa ttatggagga cgccgagctg
1081 ggaacacata ttgctttgct caaagtccgt gacaaggatt ccagacacaa tggagaagtg
1141 acttgtaaat tggaaggtga tgttccattt aaaatattaa cttcttcaag aaacacgtat
1201 aaattagtga cagatgctgt tctagaccgc gagcagaatc cagagtacaa tataaccgtt
1261 acggcaacag atcggggcaa gcctcccctc tcctccagtt ccagcatcac cctgcacatt
1321 ggtgatgtaa atgacaacgc tccggttttc tcacagtctt cctatatagt ccacgtggcc
1381 gagaacaacc cgcctggagc ctctatttca caagtcaggg cttctgatcc ggacttgggg
1441 cccaacggcc aagtctctta ctgcatcatg gccagtgacc tggagcagcg ggagctgtca
1501 tcctacgtgt ccataagcgc ggagagcggg gtggtgttcg cgcagcgcgc cttcgaccac
1561 gagcagctgc gcgccttcga actcacactg caggcccgcg accagggctc gccagcgctc
1621 agcgcgaacg tgagcctgcg cgtgttagtg gacgaccgca acgacaatgc gccacgggtg
1681 ctgtaccccg cgctgggtcc cgacggctct gcgctcttcg atatggtgcc gcacgctgca
1741 gagcctggct acttggtgac caaggtagtg gcggtggacg cagactcagg acacaacgcc
1801 tggctgtcct accacgtgct gcaggctagc gagcccgggc tcttcagcct ggggctgcgc
1861 acgggcgaag tgcgcacagc gcgtgcctta ggcgacaggg acgccgtccg ccagcgcctt
1921 ctggtcgccg tgcgtgacgg tggacagcca ccactctcgg ccactgccac gttgcacctg
1981 gtcttcgccg acagcttgca ggaggtgctg ccggatatca ctgaccgccc cgacccctct
2041 gacctccagg ctgagctgca gttttaccta gtggtggcct tggccttgat ctcagtgctc
2101 ttcctcgtgg ccatgattct ggccattgcc ttgcgcctgc gacgctcctc cagccccgcc
2161 tcctggagct gcttccagcc tggtctctgt gttaaatccg aatccgtggt tccccccaac
2221 tacagcgagg ggactttgcc ttattcctac aatctatgtg ttgcacatac aggaaagacg
2281 gagtttaatt tcctaaaatg tagtgagcag ttgagttcag gacaagacat actttgcggt
2341 gattcatctg gggccttatt tccactttgt aattccagtg aattgacttc ccatcaggtg
2401 agtttccttt aa
//