LOCUS AF152518 2436 bp mRNA linear HUM 14-JUL-1999
DEFINITION Homo sapiens protocadherin gamma B2 short form protein
(PCDH-gamma-B2) variable region sequence, complete cds.
ACCESSION AF152518
VERSION AF152518.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2436)
AUTHORS Wu,Q. and Maniatis,T.
TITLE A striking organization of a large family of human neural
cadherin-like cell adhesion genes
JOURNAL Cell 97 (6), 779-790 (1999)
PUBMED 10380929
REFERENCE 2 (bases 1 to 2436)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Human protocadherin genes
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 2436)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Direct Submission
JOURNAL Submitted (19-MAY-1999) Department of Molecular and Cellular
Biology, Harvard University, 7 Divinity Avenue, Cambridge, MA
02138, USA
FEATURES Location/Qualifiers
source 1..2436
/db_xref="H-InvDB:HIT000071822"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="5"
/map="5q31"
gene 1..2436
/gene="PCDH-gamma-B2"
CDS 1..2436
/gene="PCDH-gamma-B2"
/function="cell-cell adhesion"
/note="member of the cadherin superfamily"
/codon_start=1
/product="protocadherin gamma B2 short form protein"
/protein_id="AAD43778.1"
/translation="MKASSGRCGLVRWLQVLLPFLLSLFPGALPVQIRYSIPEELAKN
SVVGNLAKDLGLSVRDLPARKLRVSAEKEYFTVNPESGDLLVSDRIDREQICGKQPLC
VLDFDTVAENPLNIFYIAVIVQDINDNTPLFKQTKINLKIGESTKPGTTFPLDPALDS
DVGPNSLQRYHLNDNEYFDLAEKQTPDGRKYPELILKHSLDREEHSLHQLVLTAVDGG
DPPQSGTTQIRIKVTDANDNPPVFSQDVYRVTLREDVPPGFFVLQVTATDRDEGINAE
ITYSFHNVDEQVKHFFNLNEKTGEITTKDDLDFEIASSYTLSIEAKDPGDLAAHCSIQ
VEILDDNDCAPEVIVTSVSTPLPEDSPPGTVIALIKTRDRDSGENGEVYCQVLGNAKF
ILKSSSKNYYKLVTDGALDREEIPEYNLTITATDGGKPPLSSSIIVTLHISDVNDNAP
VFQQTSYMVHVAENNPPGASIAQISASDPDLGPSGQVSYSIVASDLKPREILSYVSVS
AQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLNDNAPRVLYPA
LGPDGSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTG
EVRTARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPDLSDRREPS
DPQAKLQFYLVVALALISVLFFLAVILAISLRLRLSSRSDAWDCFQPGLSSKPGPGVL
PNYSEGTLPYSYNLCVASQSAKTEFNFLNITPELVPAQDLVCDNASWEQNTNHGAAGV
PFASDTILKVSFN"
BASE COUNT 592 a 674 c 626 g 544 t
ORIGIN
1 atgaaagcga gctcagggag gtgcgggctg gtgcggtggc tgcaggtact gttgcccttc
61 ctgttgtctt tgttccccgg ggctctccca gtccagatcc gctattcaat tccagaggag
121 ctggccaaaa actcggtcgt aggaaacctc gccaaggatc tggggctcag cgtccgggac
181 ttgccagccc ggaagctgcg ggttagcgcg gagaaggaat atttcacagt aaacccagaa
241 agcggagact tacttgtgag tgacagaata gaccgagaac agatatgcgg gaagcagcct
301 ctgtgtgttc tggatttcga tactgtcgct gaaaatccac taaatatttt ctacatagca
361 gtaattgtgc aggatataaa tgataatacc ccgctattca aacagactaa gattaattta
421 aaaattggcg aatccactaa gccaggtaca acatttccac ttgacccagc cctggattca
481 gatgttggtc ctaactcact acaaagatac caccttaatg acaacgagta ctttgatctc
541 gctgagaaac agactccaga tggtcgtaaa tatcctgagt tgattctaaa acactctctg
601 gacagagaag agcacagttt acatcaattg gtcctcacag ctgtggatgg cggagaccca
661 cctcaaagtg gcacgaccca aatccgaatc aaagtcacgg atgccaacga taaccctcca
721 gtgttcagcc aggacgtgta cagggtcacc ctgagggagg acgtgccgcc gggcttcttt
781 gtgcttcaag tgacagccac cgaccgggat gaaggcataa acgcagagat cacctactcc
841 tttcataatg tggacgaaca agtgaaacac tttttcaact taaatgaaaa aacaggagaa
901 atcacgacaa aggatgattt ggattttgag attgcaagta gttacactct gagtatcgaa
961 gcaaaagatc ctggagatct agcagcccac tgcagtatcc aagttgaaat tcttgatgac
1021 aacgattgtg cacctgaagt tattgtgact tcagtatcta ctcccctacc ggaggattcg
1081 ccaccaggaa cagtgatcgc cttgataaaa acgagagaca gagactctgg agaaaatgga
1141 gaagtttact gccaagtgtt gggaaatgcc aagtttattt tgaaatcttc ctcaaagaac
1201 tattacaaac tagtgacaga cggcgctctg gaccgggagg agatcccaga atacaatctc
1261 accatcacag ccaccgacgg gggcaagccg cccctctcct ccagcataat tgtcaccctg
1321 cacatctccg acgtcaacga taatgcccca gttttccaac agacttccta catggttcac
1381 gtggcagaga acaatcctcc tggcgcctct atcgctcaaa tcagtgcctc tgaccctgac
1441 ttgggcccca gtggccaagt ttcctactcc atcgtagcga gcgacctgaa gccgcgggag
1501 attttatcct acgtgtccgt gagcgcgcag agcggggtgg tgttcgcgca gcgcgccttc
1561 gatcatgagc agctgcgcgc cttcgagctc acactgcagg cccgcgacca gggctcgccc
1621 gcgctcagcg ccaacgtgag cctgcgcgtg ttagtgggcg acctcaatga caatgcgcca
1681 cgggtgctgt accccgcgct ggggcctgat ggctccgccc tcttcgatat ggtgccacgc
1741 gccgcagagc ccggctacct ggtgaccaag gtggtggcgg tggacgcaga ctcaggacac
1801 aacgcttggc tgtcctacca cgtgctgcag gccagcgagc ccgggctctt cagcctgggg
1861 ttgcgcacgg gtgaggtgcg cacagcgcgt gccttgggcg acagggacgc ggcccgccag
1921 cgcctgctgg tcgctgtgcg tgatggagga cagccgccac tctccgctac ggccacgctg
1981 cacctaatct tcgcggatag cctgcaagag gtattgccag acctcagcga ccgccgggag
2041 ccctctgacc cccaggcaaa actgcagttt tacctggttg tggccttggc cttgatctca
2101 gtgctcttct tcctcgcggt gattctggca atctccctgc gcctgcgact ctcttccagg
2161 tcagatgctt gggactgttt tcagcctggt ctcagctcca agcctggacc tggggttctc
2221 cccaattaca gtgagggtac attgccctat tcctacaacc tgtgtgttgc ctcacaatca
2281 gccaagacag agttcaattt tctgaacata accccggaat tggttcccgc gcaagatctc
2341 gtctgtgaca atgcctcttg ggaacaaaat acaaatcatg gagccgctgg ggtccctttt
2401 gcctcagata ctattttgaa ggtgagcttt aattaa
//