LOCUS AF152513 2457 bp mRNA linear HUM 14-JUL-1999 DEFINITION Homo sapiens protocadherin gamma A6 short form protein (PCDH-gamma-A6) variable region sequence, complete cds. ACCESSION AF152513 VERSION AF152513.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2457) AUTHORS Wu,Q. and Maniatis,T. TITLE A striking organization of a large family of human neural cadherin-like cell adhesion genes JOURNAL Cell 97 (6), 779-790 (1999) PUBMED 10380929 REFERENCE 2 (bases 1 to 2457) AUTHORS Wu,Q. and Maniatis,T. TITLE Human protocadherin genes JOURNAL Unpublished REFERENCE 3 (bases 1 to 2457) AUTHORS Wu,Q. and Maniatis,T. TITLE Direct Submission JOURNAL Submitted (19-MAY-1999) Department of Molecular and Cellular Biology, Harvard University, 7 Divinity Avenue, Cambridge, MA 02138, USA FEATURES Location/Qualifiers source 1..2457 /db_xref="H-InvDB:HIT000071817" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="5" /map="5q31" gene 1..2457 /gene="PCDH-gamma-A6" CDS 1..2457 /gene="PCDH-gamma-A6" /function="cell-cell adhesion" /note="member of the cadherin superfamily" /codon_start=1 /product="protocadherin gamma A6 short form protein" /protein_id="AAD43773.1" /translation="MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSF VGNIVKDLGLEPQELAEHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRC LVSFNILVEDKLNLYPVEVEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDP DVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGG DPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGE VTYSFVKITEKISQIFCLNVLTGEISTSANLDYEDSSFYELGVEARDGPGLRDRAKVL ITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFDRDSGLNGLVTCSIPRSLPF ELEKSVGNYYRLVTNAALDREEVFLYNITVTATDKGTPPLSTETIISLNVADTNDNPP TFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAEDTLQGAPLSSYVSIN SDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYPA LPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTG EVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSA KPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWHKSRLLQASGGGLASMPGSHF VGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEPLLITQDLL ETKGEPRQLQVSFFPPKREE" BASE COUNT 560 a 703 c 663 g 531 t ORIGIN 1 atggcgcctc cgcagaggca tccgcagcgc agcgagcagg tcctgctcct cacgctcctg 61 gggacgctgt ggggggccgc ggcagcgcag atccgctact ctattcccga ggagctggag 121 aaaggctcct tcgtaggcaa catcgtcaag gatctgggac tggagcccca ggagttggcg 181 gagcacggag tccgcatcgt ctccagaggt aggatgcagc ttttctctct gaatccgcga 241 aacggcagct tggtcaccgc gggtaggata gaccgcgagg agctctgtgc tcagagcccg 301 cggtgtctgg tgagttttaa catccttgtc gaggataaac tgaatcttta tcccgtggaa 361 gtggaaatag tggacattaa tgacaataca ccccgattct taaaggaaga attggaagtg 421 aaaattctcg aaaacgcagc tccatcctct cgttttccac taatggaggt ctatgaccct 481 gatgtgggaa tgaactccct tcagggattt aagctcagtg gtaatagtca cttctcagtg 541 gacgtgcaaa gcgaagccca tgggcccaag tacccggagc tggtgctgga gggcacactg 601 gaccgggaag gagaagccgt ttaccgcctg gtccttactg ccatggatgg cggcgaccct 661 gtccgctcaa gcgtcgccca aattctggta acagttctag atgtgaatga caacactcca 721 atgtttactc agcctgtcta ccgtgtaagt gttcctgaaa acctgccagt aggcacacca 781 gtgttggcag tgactgccac cgaccaggat gaaggagtcc acggggaagt aacttattcc 841 tttgtgaaga ttacagaaaa gatctcacaa attttctgtt tgaatgtttt gactggagaa 901 atttcaactt ctgcaaatct agactatgag gactcgagtt tttatgagct gggtgttgaa 961 gcccgggatg ggccaggtct tcgagacaga gcgaaagtct taataactat cttggatgtc 1021 aatgataatg taccagaagt ggttgttaca tctggaagca gaacaattgc tgaaagtgca 1081 cctccaggaa cagtaatcgc cctttttcaa gtgttcgatc gagactctgg cctgaatggc 1141 ctggtaacct gttccatccc gagaagtctc ccatttgaat tggaaaaatc agttggcaat 1201 tattatcgat tagtgacaaa tgcagctcta gaccgggaag aggtattctt gtacaacatc 1261 actgtgacag ccacggacaa aggaacacca cctctgtcta cagaaacaat catctctcta 1321 aatgtggcag acaccaacga caacccgccc accttccccc attcatccta ctcagtctat 1381 gtccttgaaa acaaccccag gggtgcctcc atcttctctg tgaatgcact ggaccctgac 1441 gtggaccaga acgcccaagt ctcctactca ctggcagaag acaccctcca gggggcgccc 1501 ctgtcctcct acgtgtccat caactccgac actgggattc tgtacgccct gcgctccttc 1561 gactatgagc agttgagaga cctacagctg tgggtgacag ccagcgacag cggggacccg 1621 cctcttagca gcaacgtgtc actgagcctg tttgtgctgg accagaatga caatgcgccc 1681 gagatcctgt accccgccct ccccacagac ggttccactg gcgtggagct ggcgccccgc 1741 tccgcagagc ccggctacct ggtgaccaag gtggtggcgg tggacagaga ctcgggccag 1801 aacgcctggc tgtcctaccg cctgctcaag gccagcgagc caggactttt ctcagtgggc 1861 ctgcacacgg gcgaggtgcg cacggcgcgc gccctgctgg acagagacgc gctcaagcag 1921 agcctagtgg tggccgtcca ggaccacggc cagccccctc tctccgccac tgtcacgctc 1981 accgtggccg tggccgacag gatccccgac atcctggccg acctgggcag cctcgagccc 2041 tccgccaaac ccaacgattc ggacctcact ctgtacctgg tggtggcggt ggccgcggtc 2101 tcctgcgtct tcctggcctt cgtcatcgtg ctgctggcgc tcagactgca gcgctggcac 2161 aagtcacgcc tgctgcaggc ttcgggaggt ggcttagcga gcatgcccgg ctcgcacttt 2221 gtgggcgtgg aaggggttcg ggctttcctg cagacctatt cccacgaggt ctcactcact 2281 gcagactcgc gtaagagtca tctgattttc ccccagccca actatgccga cacgcttatc 2341 aaccaggaga gctatgagaa aagcgagcct cttctgataa ctcaggattt acttgaaacg 2401 aaaggagaac ccaggcaact tcaggtgagt ttctttccgc ctaagcggga agagtaa //