LOCUS AF152510 2490 bp mRNA linear HUM 14-JUL-1999
DEFINITION Homo sapiens protocadherin gamma A3 short form protein
(PCDH-gamma-A3) variable region sequence, complete cds.
ACCESSION AF152510
VERSION AF152510.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2490)
AUTHORS Wu,Q. and Maniatis,T.
TITLE A striking organization of a large family of human neural
cadherin-like cell adhesion genes
JOURNAL Cell 97 (6), 779-790 (1999)
PUBMED 10380929
REFERENCE 2 (bases 1 to 2490)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Human protocadherin genes
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 2490)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Direct Submission
JOURNAL Submitted (19-MAY-1999) Department of Molecular and Cellular
Biology, Harvard University, 7 Divinity Avenue, Cambridge, MA
02138, USA
FEATURES Location/Qualifiers
source 1..2490
/db_xref="H-InvDB:HIT000071814"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="5"
/map="5q31"
gene 1..2490
/gene="PCDH-gamma-A3"
CDS 1..2490
/gene="PCDH-gamma-A3"
/function="cell-cell adhesion"
/note="member of the cadherin superfamily"
/codon_start=1
/product="protocadherin gamma A3 short form protein"
/protein_id="AAD43770.1"
/translation="MTNCLSFRNGRGLALLCALLGTLCETGSGQIRYSVSEELDKGSF
VGNIANDLGLEPRELAERGVRIVSRGRTQLFSLNPQSGSLVTAERIDREELCAQIPLC
LVKINILVEDKLKIFEVEIEIKDINDNAPNFPTEELEIKIGELTVPGTRFPIKTAFDP
DVGINSLQNYKLSPNDYFSLAVNSVSEGAKYPELVLERALDREKKEIHQLVLVASDGG
DPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVWENVPVGTRLLTVNATDPDEGFNAQ
VSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMFYEIKIEAQDGPGLLSRAKIL
VTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVHDRDSGQNGQVEVFVLGNLPF
KLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPLSTETHITLHVIDINDNPP
TFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALTEDTLQGAPLSSFVSIN
SNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFVLDQNDNAPEILYPA
LPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTG
EVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSA
KPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGLASTPGSHF
VGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLLITQDLL
EMKGDSNLLQVSLFISLIIKNKYENVVIIKL"
BASE COUNT 603 a 689 c 645 g 553 t
ORIGIN
1 atgaccaatt gcctgagttt ccgaaatggc agaggactgg ccctgctgtg cgcgctcctg
61 gggacgctgt gcgaaacagg atccggtcag atccgctact cggtgtctga ggagctagat
121 aaaggttcct tcgtgggcaa catcgctaac gacctggggc tagagccccg ggagctggcg
181 gagcgcggag tccgcatcgt ctccagaggt aggacgcagc ttttctctct gaatccgcaa
241 agcggcagct tggtcaccgc ggagaggata gaccgggagg agctctgcgc tcagatcccg
301 ctgtgtctgg taaaaattaa cattctggtt gaggataaat tgaaaatttt tgaagtagaa
361 atagaaatta aagatattaa tgataatgct cctaatttcc caacagagga attggaaata
421 aaaattggtg aactaacggt tcctggaacc cgatttccaa ttaaaactgc ttttgaccca
481 gatgtaggca ttaactccct gcagaactac aagcttagcc ccaatgacta cttctctctg
541 gctgtgaata gcgtctctga gggggccaag tatccagagc tggtgctgga gcgggccctg
601 gaccgtgaga aaaaagaaat tcaccagctt gtcctggttg cctctgatgg tggcgaccct
661 gtccactctg gcaacttgca catccaagtg atagtcctgg atgcaaatga caacccacca
721 atgtttactc agcctgagta ccgtgtgagt gtttgggaga acgtgcctgt gggtacccgg
781 ctgctcacgg tgaatgccac tgaccctgac gagggattca atgctcaagt gtcttatatt
841 ctagataaaa tgcctgggaa aatcgctgag attttccatc ttaactcagt gagtggagaa
901 gtatcaatat taaaaagtct agattatgag gatgccatgt tctatgaaat taaaattgaa
961 gcacaggatg gaccaggtct tctttcaaga gccaagattc tagtcacggt tctggatgtg
1021 aatgacaatg ctccagaaat tacaatcacg tctctcacaa gctcagtccc agaagagggc
1081 accgttggaa gagaaattgc tcttatcgac gtgcatgacc gagattctgg gcagaatggg
1141 caggttgaag tttttgtcct gggaaatctg ccatttaagt tagaaaaatc aatagatcaa
1201 tattaccgct tagtgacggc cacatccctg gaccgcgaac aaatatcaga atataacatt
1261 agtctgagag cctcagatgg gggaagcccg ccactgtcca cagaaactca catcaccctg
1321 catgtgattg acatcaatga caacccaccc accttccctc atttatccta ctccgcctac
1381 attccagaaa acaaccccag aggagcctcc atcttctcag tgacagccca ggacccagat
1441 agcaacaaca acgcccgcat cacttatgca ttgaccgagg acactctcca gggggcgccc
1501 ctgtcctcct tcgtctctat caactccaac actggcgtcc tatacgcgct gagatccttc
1561 gactacgagc aatttagaga cttaaagcta ctggtgacag ccagcgacag cgggaaccct
1621 ccactcagca gcaacgtgtc gctgaacctg ttcgtgctgg accagaacga caacgcgccc
1681 gagatcctgt accccgccct ccccacagac ggttccactg gcgtggagct ggcgcctcgc
1741 tccgcagagc ccggctacct ggtgaccaag gtggtggcgg tggacagaga ctcgggccag
1801 aacgcctggc tgtcctaccg cctgctcaag gccagcgagc cgggactctt ctcggtgggt
1861 ctgcacacgg gcgaggtgcg cacggcgcga gccctgctgg acagagacgc gctcaagcag
1921 agcctcgtgg tggccgtcca ggaccacggc cagccccctc tctccgccac tgtcacgctc
1981 accgtggccg tggccgacag gatccccgac atcctggccg acctgggcag cctcgagccc
2041 tccgccaaac ccaacgattc ggacctcact ctgtacctgg tggtggcggt ggccgcggtc
2101 tcctgcgtct tcctggcctt cgtcatcgtg ctgctggcgc tcaggctgcg gcgctggcac
2161 aagtcacgcc tgctgcaggc ttcgggaggc ggcttggcga gtacgcccgg ctcgcacttt
2221 gtgggcgcgg acggggttcg ggctttcctg cagacctatt cccacgaggt ctccctcact
2281 gcggactcgc ggaagagcca cctgattttc ccccagccca actatgcgga cacgctcatc
2341 agccaggaga gctgtgagaa aagcgagcct cttctgataa ctcaggattt acttgaaatg
2401 aaaggagatt ccaacctact tcaggtgagt ttatttattt ctttgattat taagaacaaa
2461 tatgagaatg tggttattat aaagctttaa
//