LOCUS AF152507 2472 bp mRNA linear HUM 14-JUL-1999 DEFINITION Homo sapiens protocadherin gamma A1 short form protein (PCDH-gamma-A1) variable region sequence, complete cds. ACCESSION AF152507 VERSION AF152507.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2472) AUTHORS Wu,Q. and Maniatis,T. TITLE A striking organization of a large family of human neural cadherin-like cell adhesion genes JOURNAL Cell 97 (6), 779-790 (1999) PUBMED 10380929 REFERENCE 2 (bases 1 to 2472) AUTHORS Wu,Q. and Maniatis,T. TITLE Human protocadherin genes JOURNAL Unpublished REFERENCE 3 (bases 1 to 2472) AUTHORS Wu,Q. and Maniatis,T. TITLE Direct Submission JOURNAL Submitted (19-MAY-1999) Department of Molecular and Cellular Biology, Harvard University, 7 Divinity Avenue, Cambridge, MA 02138, USA FEATURES Location/Qualifiers source 1..2472 /db_xref="H-InvDB:HIT000071811" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="5" /map="5q31" gene 1..2472 /gene="PCDH-gamma-A1" CDS 1..2472 /gene="PCDH-gamma-A1" /function="cell-cell adhesion" /note="member of the cadherin superfamily" /codon_start=1 /product="protocadherin gamma A1 short form protein" /protein_id="AAD43768.1" /translation="MKIQKKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSF VGNIAKDLGLQPQELADGGVRIVSRGRMPLFALNPRSGSLITARRIDREELCAQSMPC LVSFNILVEDKMKLFPVEVEIIDINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDL DVGMNSLQSYQLSSNPHFSLDVQQGADGPQHPEMVLQSPLDREEEAVHHLILTASDGG EPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVPENVPLGTQLLMVNATDPDEGANGE VTYSFHNVDHRVAQIFRLDSYTGEISNKEPLDFEEYKMYSMEVQAQDGAGLMAKVKVL IKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVHDQDSGDNGYTTCFIPGNLPF KLEKLVDNYYRLVTERTLDRELISGYNITITAIDQGTPALSTETHISLLVTDINDNSP VFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLIEDTIQGAPLSAYLSIN SDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFLLDQNDNAPEILYPA LPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTG EVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDILADLGSLEPSA KPNDSDLTLYLVVAAAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLASMPGSHF VGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGFLSAPQSLL EDKKEPFSQVNFCDECISYLEKNNS" BASE COUNT 618 a 685 c 617 g 552 t ORIGIN 1 atgaagattc agaaaaagct gactggctgc agcaggctga tgcttctgtg tctttctctg 61 gagctgctgt tggaagctgg ggctgggaat attcactact cagtgccgga agagacagac 121 aaaggttcct tcgtaggcaa catcgccaag gacctagggc tgcaacccca ggagctggca 181 gatggcggag tccgcatcgt ctccagaggt aggatgccgc ttttcgctct gaatcctaga 241 agtggcagct tgatcaccgc gcgcaggata gaccgggagg agctctgcgc tcagagcatg 301 ccgtgtctcg tgagttttaa tatccttgtt gaggataaaa tgaagctttt tcctgttgaa 361 gtagaaataa ttgatattaa tgacaacact ccccaattcc agttagagga actggagttt 421 aaaatgaatg aaataacgac tccaggtacc agagtctcat tgccttttgg gcaagacctt 481 gatgtgggta tgaactcact ccagagctac caactcagct ctaaccctca tttctccctg 541 gatgtgcaac agggagccga tgggcctcaa catccagaga tggtgctgca gagtccctta 601 gacagagaag aagaagctgt ccaccacctc atcctcacag cttctgatgg gggtgaacca 661 gtccgttcag ggaccctcag aatttacatt caggtggtgg atgcaaatga caatcctcca 721 gcatttactc aggcacaata ccatataaat gtccccgaaa acgtgccgct gggtactcag 781 ctgctcatgg taaatgccac tgaccctgat gagggagcca atggggaagt aacgtactcc 841 tttcacaatg tagaccacag agtggcccaa atatttcgtt tagattctta cacaggagaa 901 atatcaaata aagaaccact agatttcgaa gaatacaaaa tgtattcaat ggaagttcaa 961 gcccaggatg gtgcggggct catggctaaa gttaaggtac tgatcaaagt tttggatgta 1021 aatgataatg ccccagaagt gaccatcacc tctgtcacca ctgcagttcc agaaaacttt 1081 cctcctggga ccataattgc tcttatcagt gtgcatgacc aggactcagg agacaatggc 1141 tacaccacat gtttcattcc tggaaattta ccctttaaat tggaaaagtt agttgataat 1201 tattaccgtt tagtgactga aagaacactg gacagagaac ttatctctgg gtacaacatc 1261 acaataacag caatagacca aggaactcca gctctatcta ctgaaactca catttcacta 1321 ctagtgacag atatcaatga caactcccca gtcttccatc aggactccta ctctgcctac 1381 attcccgaaa acaaccccag aggagcctcc atcttctctg tgagggccca cgacttggac 1441 agcaatgaga atgcacaaat cacttactcc ctaatagagg acactatcca gggggcaccc 1501 ctatctgcct acctctccat caactccgac actggggtcc tgtatgcgct gcgatccttc 1561 gactatgagc agttccggga catgcaactg aaagtgatgg cgcgggacag tggggatccg 1621 cccctcagca gcaacgtgtc tctcagccta ttcctgctgg accagaacga caacgcgccc 1681 gagatcctgt accccgccct ccccacagat ggttctaccg gcgtggagct ggcgcccctc 1741 tccgcagagc ccggctacct ggtgaccaag gtggtggcgg tggacagaga ctcgggccag 1801 aacgcctggc tgtcctaccg cctgctcaag gccagcgagc cgggactctt ctcggtgggt 1861 ctgcacacgg gcgaggtgcg cacggcgcga gccctgctgg acagagacgc gctcaagcag 1921 agtctcgtgg tggccgtcca ggaccacggc cagcccccgc tctccgccac tgtcacgctc 1981 accgtggccg tggccgacag gatctccgac atcctggccg acctgggcag cctcgagccc 2041 tccgccaaac ccaacgattc ggacctcact ctgtacctgg tggtggcggc ggccgcggtc 2101 tcctgcgtct tcctggcctt cgtcatcgtg ctgctggcgc acaggctgcg gcgctggcac 2161 aagtcacgtc tgctacaggc ttcgggaggc ggcttagcga gcatgcccgg ttcgcacttt 2221 gtgggcgtgg acggggttcg ggctttcctg cagacctatt cccacgaggt ctccctcact 2281 gcggactcgc ggaagagcca cctgattttc ccccagccca actatgcgga cacactcatc 2341 agccaggaga gctgtgagaa aaagggtttt ctatcagcac cccagtcttt acttgaagac 2401 aaaaaggaac cattttctca ggtaaacttt tgtgatgaat gtatcagcta tctagagaaa 2461 aataattctt ga //