LOCUS AF152505 2514 bp mRNA linear HUM 14-JUL-1999
DEFINITION Homo sapiens protocadherin gamma A11 short form protein
(PCDH-gamma-A11) variable region sequence, complete cds.
ACCESSION AF152505
VERSION AF152505.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2514)
AUTHORS Wu,Q. and Maniatis,T.
TITLE A striking organization of a large family of human neural
cadherin-like cell adhesion genes
JOURNAL Cell 97 (6), 779-790 (1999)
PUBMED 10380929
REFERENCE 2 (bases 1 to 2514)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Human protocadherin genes
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 2514)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Direct Submission
JOURNAL Submitted (19-MAY-1999) Department of Molecular and Cellular
Biology, Harvard University, 7 Divinity Avenue, Cambridge, MA
02138, USA
FEATURES Location/Qualifiers
source 1..2514
/db_xref="H-InvDB:HIT000071809"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="5"
/map="5q31"
gene 1..2514
/gene="PCDH-gamma-A11"
CDS 1..2514
/gene="PCDH-gamma-A11"
/function="cell-cell adhesion"
/note="member of the cadherin superfamily"
/codon_start=1
/product="protocadherin gamma A11 short form protein"
/protein_id="AAD43766.1"
/translation="MANRLQRGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGS
FVGNISKDLGLEPRELAKRGVRIVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSS
CFLNMELLVEDTLKIYGVEVEIIDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARD
PDVGVNSLQSYQLSPNNYFSLQLRGRTDGAKNPELVLEGSLDREKEAAHLLLLTALDG
GDPIRKGAVPIRVVVLDVNDHIPMFTQSVYRVSVPENISSGTRVLMVNATDPDEGING
EVMYSFRNMESKASEIFQLDSQTGEVQVRGSLDFEKYRFYEMEIQGQDGGGLFTTTTM
LITVVDVNDNAPEITITSSINSILENSPPGTVIALLNVQDQDSGENGQVSCFIPNHLP
FKLEKTYGNYYKLITSRVLDRELVQSYNITLTATDQGSPPLSAETHVWLNVADDNDNP
PVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNALVTYSLTDDTVQGVPLSSYVSI
NSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSNVSLSLFVLDQNDNAPEILYP
ALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFAVGEHT
GEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLADLGSLESL
ANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLLQASEGGLAGMPTSH
FVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQESCEKSEPLLIAEDS
AIILGKCDPTSNQVRFISLPPNCWCLGTSLLRRCFLSLL"
BASE COUNT 586 a 663 c 682 g 583 t
ORIGIN
1 atggcgaatc ggctacagcg cggggaccgc agtcggctgc tgctgctgct gtgcattttc
61 ctggggacgc tgcgggggtt ccgggccagg cagatccgat attcggtgcc agaagagacc
121 gaaaagggct ccttcgtggg caatatctcc aaggacctgg ggctggagcc ccgggagctg
181 gcgaagcgcg gagtccgcat cgtctccaga gggaagacac agcttttcgc tgtgaatccg
241 cgaagcggca gcttgatcac ggcaggcagg atagaccggg aggagctctg tgagacggtg
301 tcctcctgtt ttttaaatat ggaacttctc gtggaagaca ccttgaagat ttacggagtg
361 gaggtggaaa taatagatat taatgataac gcccccagct tccaggagga cgaagtggag
421 ataaaagtca gtgagcacgc aattcctggg gcgcgatttg ctcttcctaa tgctagggat
481 ccagatgtgg gcgtgaactc cctccagagc taccagctca gccctaataa ttacttttcc
541 ttgcaactgc ggggcagaac ggatggggcc aagaatccag agctagtact ggagggaagc
601 ctggaccgag agaaagaggc tgctcacctg ctcctcctca cagctttaga tggaggcgat
661 cccatccgaa agggcgcagt tcccattcgt gtggtggtcc tcgatgtaaa tgatcacatc
721 ccaatgttta cacagtccgt atatcgcgtg agtgttccag aaaacatcag ctccggaact
781 cgggtgctga tggttaatgc aacggatcca gacgagggaa tcaacgggga agtaatgtat
841 tcatttcgga acatggaaag caaggcttct gaaatattcc aattggattc acaaactgga
901 gaagttcaag tacgggggtc tctggatttt gaaaaatata gattctatga gatggaaatt
961 caaggccaag atggtggagg tctctttacc accacgacga tgttgatcac tgttgtggat
1021 gtgaatgata acgctccaga aataactatc acctcttcta ttaattcaat tctggaaaac
1081 tctcctccag gtacagtgat tgctcttcta aatgtgcaag atcaagattc tggagaaaat
1141 ggtcaagtct cctgttttat tcctaaccac ctgcctttta aattagaaaa gacttatgga
1201 aattattaca aattgataac aagcagagtg ctggacaggg agttggtcca gagctacaat
1261 ataacgttga cagccacaga ccagggaagc ccgcctttgt ctgcagaaac tcatgtctgg
1321 ctgaatgtgg cagatgacaa cgataaccct cccgtttttc ctcactcctc ttactctgcc
1381 tacattcccg aaaacaaccc caggggtgcc tccatcttct cagtgaccgc cctcgacccg
1441 gacagcaaac agaatgccct ggtcacttac tctctgacgg atgacactgt ccagggggtg
1501 cctctgtcct cctatgtctc tattaactcc aacactggtg ttctctatgc cctacaatcc
1561 ttcgactatg agcagtttcg agacttagaa ctgagagtga tagcacgtga cagcggggac
1621 ccgcccctca gcagcaacgt gtcgctgagc ctgttcgtgc tggaccagaa cgacaatgcg
1681 cccgagatcc tgtaccctgc cctccccaca gacggctcca ctggcgtgga gctggcgccc
1741 cgctctgcgg aacctggcta cctggtgacc aaggtggttg cggtggacaa agattcaggc
1801 cagaacgcct ggctgtccta tcgcctgctt aaggccagcg agccgggact cttcgcggtg
1861 ggggagcaca cgggcgaggt gcgtacagcg cgggcactgc tggacagaga cgcgctcaag
1921 cagagcctcg tggtggccgt ccaggaccac ggccagcccc ctctctcggc caccgtcacg
1981 ctcaccgtgg ctgtggccga cagcatcccc gaagtcctgg cggacctcgg cagcctcgag
2041 tctctggcta actctgaaac ctcagacctc tcgctgtact tggtggtggc ggtggccgca
2101 gtctcctgca tcttcctggt ctttgtcatc gtgctgctgg cactcaggct gtggcgctgg
2161 cataagtcac gcctgctgca ggcttctgaa ggcgggttgg caggtatgcc cacgtcacat
2221 tttgtaggcg tggacggggt acaggctttc ctgcaaacct attcccacga ggtctctctc
2281 attgcggact cgcagaagag tcacctgatt ttcccccagc ccaactatgg ggacacgctc
2341 atcagccagg agagctgtga gaaaagcgag ccactcttga tagctgaaga ctcagctatc
2401 attttaggca aatgtgaccc gacaagtaat caggtgagat ttatttctct gcctcctaat
2461 tgttggtgtc ttggcacaag tcttttaagg agatgttttt tgagcctgtt atga
//