LOCUS AF152339 4641 bp mRNA linear HUM 22-JUL-1999
DEFINITION Homo sapiens protocadherin gamma C5 (PCDH-gamma-C5) mRNA, complete
cds.
ACCESSION AF152339
VERSION AF152339.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4641)
AUTHORS Wu,Q. and Maniatis,T.
TITLE A striking organization of a large family of human neural
cadherin-like cell adhesion genes
JOURNAL Cell 97 (6), 779-790 (1999)
PUBMED 10380929
REFERENCE 2 (bases 1 to 4641)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Human protocadherin genes
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4641)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-1999) Department of Molecular and Cellular
Biology, Harvard University, 7 Divinity Avenue, Cambridge, MA
02138, USA
FEATURES Location/Qualifiers
source 1..4641
/db_xref="H-InvDB:HIT000071765"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="5"
/map="5q31"
/tissue_type="brain"
gene 1..4641
/gene="PCDH-gamma-C5"
CDS 1..2835
/gene="PCDH-gamma-C5"
/function="cell-cell adhesion"
/note="member of the cadherin superfamily"
/codon_start=1
/product="protocadherin gamma C5"
/protein_id="AAD43733.1"
/translation="MGPKTLPQLAGKWQVLCMLSLCCWGWVSGQLRYSVVEESEPGTL
VGNVAQDLGLKMTDLLSRRLQLGSEENGRYFSLSLMSGALAVNQKIDRESLCGASTSC
LLPVQVVTEHPLELIRVEVEILDLNDNSPSFATPEREMRISESAASGARFPLDSAQDP
DVGTNTVSFYTLSPNSHFSLNVKTLKDGKPFPELVLEQQLDREAQARHQLVLTAVDGG
TPARSGTTLISVIVLDINDNAPTFQSSVLRVGIPENAPIGTLLLRLNATDPDEGTNGQ
LDYSFGDHTSEAVRNLFGLDPSSGAIHVLGPIDFEESRFYEIHARARDQGQPAMEGHC
VIQVDVGDVNDNAPEVLLASLANPVLESTPVGTVVGLFNVRDRDSGRNGEVSLDISPD
LPFQIKPSENHYSLLTSQPLDREATSHYIIELLASDAGSPSLHKHLTIRLNISDVNDN
APRFNQQLYTAYILENRPPGSLLCTVAASDPDTGDNARLTYSIVGNQVQGAPASSFVY
VNPEDGRIFAQRTFDYELLQMLQIVVGVRDSGSPPLHANTSLHVFVLDENDNAPAVLH
PRPDWEHSAPQRLPRSAPPGSLVTKVTAVDADAGHNAWLSYSLLPQSTAPGLFLVSTH
TGEVRTARALLEDDSDTQQVVVLVRDNGDPSLSSTATVLLVLEDEDPEEMPKSSDFLI
HPPERSDLTLYLIVALATVSLLSLVTFTFLSAKCLQGNADGDGGGGQCCRRQDSPSPD
FYKQSSPNLQVSSDGTLKYMEVTLRPTDSQSHCYRTCFSPASDGSDFTFLRPLSVQQP
TALALEPDAIRSRSNTLRERSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFD
TEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNA
TLTNAAGKRDGKAPAGGNGNKKKSGKKEKK"
BASE COUNT 1003 a 1400 c 1221 g 1017 t
ORIGIN
1 atggggccca agacactccc acagctcgct gggaaatggc aagtgctgtg catgttgtcc
61 ttgtgctgct ggggctgggt gtctgggcag cttcgttact cagtggtgga ggagtctgag
121 ccggggacgc tggtggggaa tgttgctcag gatctgggct taaagatgac agatctgttg
181 agccggcggc tgcaattggg ctctgaggag aatgggcgct atttttccct gagcttgatg
241 agtggtgccc tggcagtgaa tcaaaagatt gaccgagaaa gcctatgtgg agccagcacc
301 agctgcctgc tgccagtgca ggtggtgact gaacaccccc tggagctaat ccgtgtagag
361 gtagagatcc tggatctcaa tgacaactct cctagctttg ccacccctga gcgagagatg
421 cgcatctcag aatcagcagc atctggggca cgattcccac tggacagtgc ccaggatccg
481 gatgtgggca ccaatactgt gagcttttac actctaagcc ccaacagcca cttctctctg
541 aatgtgaaga ccctaaaaga tgggaagcca ttcccagagc tggtgctaga gcagcagctg
601 gatcgtgaag cccaggcaag acatcagctg gtgcttactg ctgtggatgg ggggacccca
661 gcccgctcag ggaccaccct tatctctgtc atcgtgctgg acatcaatga taatgctcca
721 accttccaat cctcagttct acgtgtggga atcccagaga atgcacccat tggtactctg
781 ctgctccgcc tcaatgccac tgatccagac gagggcacca acggccaact agactattct
841 tttggagacc acacatctga ggcagtgcgg aacctctttg gcctagaccc tagcagtggg
901 gcaatccatg tgttgggtcc catagacttt gaggagtcac gtttctatga aattcatgca
961 agagcccgtg accagggaca gcctgccatg gagggccact gtgtgattca agtggatgtg
1021 ggggatgtca atgacaatgc cccagaggtg ctattggcct ctttggccaa ccctgtccta
1081 gagagcacac cagtgggcac agtagtgggg ttgtttaatg tgcgagaccg ggactcaggt
1141 agaaatggtg aagtgagcct tgatatctct ccggacctgc catttcagat taagccttct
1201 gagaaccact actcgctgct aaccagccag cctttggacc gggaggccac atcccactat
1261 atcatcgagc tgctggccag cgatgctggt tcaccttccc tacacaaaca tctcaccatc
1321 aggctcaaca tttcagatgt caatgacaat gcaccccgct tcaaccagca gctttacact
1381 gcttacatcc tagaaaaccg gcctccgggc tcccttcttt gcactgtggc tgcctcagat
1441 ccagacactg gggataatgc ccgcctcacc tactccattg taggaaatca ggttcaggga
1501 gccccagcct cctcctttgt gtatgtcaac ccagaggatg gacggatctt tgcccagcgt
1561 acctttgact atgaattgct gcagatgctg cagattgtgg tgggggttcg agactccggc
1621 tctcccccat tgcatgccaa cacatctctg catgtgtttg tcctagacga gaatgataat
1681 gccccagctg tgctgcaccc acggccagac tgggaacact cagcccccca gcgtctccct
1741 cgctctgctc ctcctggctc cttggtcacc aaggtgacag ccgtggatgc tgatgcaggc
1801 cacaatgcgt ggctctccta ctcactgttg ccacagtcca cagccccagg actgttcctc
1861 gtgtctacac acactggtga ggtgcgcaca gcccgggcct tactggagga tgactctgac
1921 acccagcagg tggtggtcct ggtgagggac aatggtgacc cttcactctc ctccacagcc
1981 acagtgctgc tggttctgga ggatgaggac cctgaggaaa tgcccaaatc cagtgacttc
2041 ctcatacacc ctcctgagcg ttcagacctt accctttacc tcattgtggc tctagcgacc
2101 gtcagtctct tatccctagt caccttcacc tttctgtcag cgaagtgcct tcagggaaac
2161 gcagacgggg acgggggtgg agggcagtgc tgcaggcgcc aggactcacc ctccccggac
2221 ttctataagc agtccagccc caacctgcag gtgagctcgg acggcacgct caagtacatg
2281 gaggtgacgc tgcggcccac agactcgcag agccactgct acaggacgtg cttttcaccg
2341 gcctcggacg gcagtgactt cacttttcta agacccctca gcgttcagca gcccacagct
2401 ctggcgctgg agcctgacgc catccggtcc cgctctaata cgctgcggga gcggagccag
2461 caagccccgc ccaacacgga ctggcgtttc tctcaggccc agagacccgg caccagcggc
2521 tcccaaaatg gcgatgacac cggcacctgg cccaacaacc agtttgacac agagatgctg
2581 caagccatga tcttggcgtc cgccagtgaa gctgctgatg ggagctccac cctgggaggg
2641 ggtgccggca ccatgggatt gagcgcccgc tacggacccc agttcaccct gcagcacgtg
2701 cccgactacc gccagaatgt ctacatccca ggcagcaatg ccacactgac caacgcagct
2761 ggcaagcggg atggcaaggc cccagcaggt ggcaatggca acaagaagaa gtcgggcaag
2821 aaggagaaga agtaacatgg aggccaggcc aagagccaca gggcggcctc tccccaacca
2881 gcccagcttc tccttacctg cacccaggcc tcagagtttc agggctaacc cccagaatac
2941 tggtaggggc caaggccatg ctccccttgg gaaacagaaa caagtgccca gtcagcacct
3001 accccttccc ccccaggggg ttgaatatgc aaaagcagtt ccgctgggaa cccccatcca
3061 atcaactgct gtacccatgg gggtagtggg gttactgtag acaccaagaa ccatttgcca
3121 caccccgttt agttacagct gaactcctcc atcttccaaa tcaatcaggc ccatccatcc
3181 catgcctccc tcctccccac cccactccaa cagttcctct ttcccgagta aggtggttgg
3241 ggtgttgaag taccaagtaa cctacaagcc tcctagttct gaaaagttgg aagggcatca
3301 tgacctcttg gcctctcctt tgattctcaa tcttccccca aagcatggtt tggtgccagc
3361 cccttcacct ccttccagag cccaagatca atgctcaagt tttggaggac atgatcacca
3421 tccccatggt actgatgctt gctggattta gggagggcat tttgctacca agcctcttcc
3481 caacgccctg gggaccagtc ttctgttttg tttttcattg tttgacgttt ccactgcatg
3541 ccttgacttc ccccacctcc tcctcaaaca agagactcca ctgcatgttc caagacagta
3601 tggggtggta agataaggaa gggaagtgtg tggatgtgga tggtgggggc atggacaaag
3661 cttgacacat caagttatca aggccttgga ggaggctctg tatgtcctca ggggactgac
3721 aacatcctcc agattccagc cataaaccaa taactaggct ggacccttcc cactacataa
3781 tagggctcag cccaggcagc cagctttggg ctgagctaac aggaccaatg gattaaactg
3841 gcatttcagt ccaaggaagc tcgaagcagg tttaggacca ggtccccttg agaggtcaga
3901 ggggcctctg tgggtgctgg gtactccaga ggtgccactg gtggaagggt cagcggagcc
3961 ccagcaggaa gggtgggcca gccaggccat tcttagtccc tgggttgggg aggcagggag
4021 ctagggcagg gaccaaatga acagaaagtc tcagcccagg atggggcttc ttcaacaggg
4081 cccctgccct cctgaagcct cagtccttca ccttgccagg tgccgtttct cttccgtgaa
4141 ggccactgcc caggtcccca gtgcgccccc tagtggccat agcctggtta aagttcccca
4201 gtgcctcctt gtgcatagac cttcttctcc cacccccttc tgcccctggg tccccggcca
4261 tccagcgggg ctgccagaga accccagacc tgcccttaca gtagtgtagc gccccctccc
4321 tctttcggct ggtgtagaat agccagtagt gtagtgcggt gtgcttttac gtgatggcgg
4381 gtgggcagcg ggcggcgggc tccgcgcagc cgtctgtcct tgatctgccc gcggcggccc
4441 gtgttgtgtt ttgtgctgtg tccacgcgct aaggcgaccc cctcccccgt actgacttct
4501 cctataagcg cttctcttcg catagtcacg tagctcccac cccaccctct tcctgtgtct
4561 cacgcaagtt ttatactcta atatttatat ggcttttttt cttcgacaaa aaaataataa
4621 aacgtttctt ctgaaaagct g
//