LOCUS AF152338 4623 bp mRNA linear HUM 22-JUL-1999
DEFINITION Homo sapiens protocadherin gamma C4 (PCDH-gamma-C4) mRNA, complete
cds.
ACCESSION AF152338
VERSION AF152338.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4623)
AUTHORS Wu,Q. and Maniatis,T.
TITLE A striking organization of a large family of human neural
cadherin-like cell adhesion genes
JOURNAL Cell 97 (6), 779-790 (1999)
PUBMED 10380929
REFERENCE 2 (bases 1 to 4623)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Human protocadherin genes
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4623)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-1999) Department of Molecular and Cellular
Biology, Harvard University, 7 Divinity Avenue, Cambridge, MA
02138, USA
FEATURES Location/Qualifiers
source 1..4623
/db_xref="H-InvDB:HIT000071764"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="5"
/map="5q31"
/tissue_type="brain"
gene 1..4623
/gene="PCDH-gamma-C4"
CDS 1..2817
/gene="PCDH-gamma-C4"
/function="cell-cell adhesion"
/note="member of the cadherin superfamily"
/codon_start=1
/product="protocadherin gamma C4"
/protein_id="AAD43732.1"
/translation="MLRKVRSWTEIWRWATLLFLFYHLGYVCGQIRYPVPEESQEGTF
VGNVAQDFLLDTDSLSARRLQVAGEVNQRHFRVDLDSGALLIKNPIDREALCGLSASC
IVPLEFVTEGPLEMYRAEVEIVDVNDHAPRFPRQQLDLEIGEAAPPGQRFPLEKAQDA
DVGSNSISSYRLSSNEHFALDVKKRSDGSLVPELLLEKPLDREKQSDYRLVLTAVDGG
NPPRSGTAELRVSVLDVNDNAPAFQQSSYRISVLESAPAGMVLIQLNASDPDLGPSGN
VTFYFSGHTPDRVRNLFSLHPTTGKLTLLGPLDFESENYYEFDVRARDGGSPAMEQHC
SLRVDLLDVNDNAPYITVTSELGTLPESAEPGTVVALISVQDPDSGSNGDVSLRIPDH
LPFALKSAFRNQFSLVTAGPLDREAKSSYDIMVTASDAGNPPLSTHRTIFLNISDVND
NPPSFFQRSHEVFVPENNRPGDLLCSLAASDPDSGLNALISYSLLEPRNRDVSASSFI
SLNPQTGAVHATRSFDYEQTQTLQFEVQARDRGNPPLSSTVTVRLFVLDLNDNAPAVL
RPRARPGSLCPQALPPSVGAGHLITKVTAVDLDSGYNAWVSYQLLEAPDPSLFAVSRY
AGEVRTAVPIPADLPPQKLVIVVKDSGSPPLSTSVTLLVSLEEDTHPVVPDLRESSAP
REGESRLTLYLAVSLVAICFVSFGSFVALLSKCLRGAACGVTCFPAGTCACLTRSRRR
EGLPPSNGILRIQLGSDDPIKFVDVGGHSHGCTPLASAPTRSDSFMMVKSPSAPMAGE
PVRPSCPPSDLLYGLEQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQA
MILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAA
GKRDGKAPAGGNGNKKKSGKKEKK"
BASE COUNT 987 a 1360 c 1202 g 1074 t
ORIGIN
1 atgctccgca aggtgagaag ctggacagaa atctggcggt gggctaccct tttgttcctc
61 ttttaccacc tgggttacgt ttgtgggcag atccgctacc cggtcccaga ggagtcacag
121 gaagggactt ttgtagggaa tgtcgctcaa gatttcctgc tggatacgga cagtctgtca
181 gctcgcaggc tgcaggtcgc tggagaggtg aaccaaagac acttccgtgt ggatttggac
241 agcggagccc tgctcatcaa gaacccaatc gaccgagagg cactgtgtgg gctcagtgcc
301 agctgcatcg tgcccctgga gtttgtcacc gaaggtcctt tggaaatgta ccgagcagag
361 gtagagatcg tagatgtgaa tgatcacgcc ccccgttttc cgcggcagca gctggacttg
421 gaaattgggg aggcagctcc tccaggacag cgtttcccgt tggaaaaggc tcaggatgca
481 gatgtgggga gcaattcgat tagcagctat aggctgagct ccaatgaaca ctttgcactg
541 gatgtgaaga agcgcagcga cggcagcctg gtcccagagc tgctcctgga gaagcctttg
601 gatcgagaga agcaatcgga ctaccgcctg gtgctgactg ctgtcgatgg agggaacccg
661 ccgagatctg gcaccgcaga gctccgggta tccgtgctgg acgtaaacga caacgcccca
721 gccttccagc aatccagcta caggattagt gtgttggaga gcgcaccagc gggcatggtg
781 ctcatccagc tcaatgcctc agacccggac ctgggtccca gtggtaacgt caccttttat
841 ttcagtggtc atacccctga tcgtgtaaga aacctcttta gcctgcaccc cactactgga
901 aagcttactc ttttggggcc cctagacttt gagagtgaga attactatga atttgatgtg
961 cgggctcgcg atgggggttc tccagccatg gagcaacatt gcagccttcg agtggatctg
1021 ctggacgtaa atgacaatgc cccttacatc acagtgacct cagagcttgg aaccctcccc
1081 gagagtgcag aacctggcac tgtggtggca cttatcagtg tgcaggatcc agactcaggg
1141 tcaaacggag atgtgagcct ccgcattcct gaccacttgc catttgccct caagtctgcc
1201 ttcaggaacc agttctccct ggtgactgct ggacccttgg atcgagaggc caaatctagc
1261 tatgacatca tggtcactgc ttctgatgct gggaaccctc ctctcagtac ccacagaact
1321 attttcctca atatttcaga tgtgaatgat aatccaccct ctttctttca gaggtcacat
1381 gaggtgtttg ttcctgagaa caatcgccca ggggacctgc tttgctccct tgcagcctct
1441 gacccagact ctggcttgaa tgcgcttatc tcctactcac tcctggagcc caggaatcga
1501 gatgtatcag cttcctcttt catctctctg aacccccaga caggagctgt tcatgctact
1561 cgatcctttg actatgagca aacccagaca ctgcagtttg aggtgcaggc ccgggatcgg
1621 ggcaacccac cccttagcag cactgtaaca gttcgtctat ttgtgctgga cctcaatgac
1681 aatgctccag ctgtgctccg tcctcgggcc cggcctggtt ccttatgtcc ccaagcactg
1741 cctccatcag ttggtgctgg ccacctaatc acaaaggtga ctgctgtgga cttggattca
1801 ggttacaatg cttgggtttc ctatcagctc ctggaggccc cagatcccag cctgtttgca
1861 gtctctcgat atgctgggga ggtgcggacg gctgttccta tcccagctga cctcccacca
1921 cagaagctgg tcattgtggt aaaggatagt ggtagtccac cactctctac ctctgttact
1981 ctcttagtgt ccttagagga agacactcat ccagttgtcc cagatcttcg agaatcttca
2041 gctccaaggg aaggagaatc tcgtctaacc ctctacttgg ctgtgtccct agtggcaatt
2101 tgctttgtct cctttggctc attcgtggca ctactctcta agtgtcttcg tggggcagcc
2161 tgtggagtca catgctttcc tgctggcacc tgtgcctgtc tcaccagatc tcgaaggagg
2221 gaggggcttc ccccttccaa tgggatcctc cgaatccagc tagggtcaga tgaccctatc
2281 aagtttgttg atgtgggagg ccactctcat ggctgtacac ccttggcttc tgcacccact
2341 cggagtgata gcttcatgat ggtgaagtca cccagtgcac ctatggcagg ggagcctgtt
2401 cgcccaagct gcccaccctc tgatcttctc tatgggctag agcaagcccc gcccaacacg
2461 gactggcgtt tctctcaggc ccagagaccc ggcaccagcg gctcccaaaa tggcgatgac
2521 accggcacct ggcccaacaa ccagtttgac acagagatgc tgcaagccat gatcttggcg
2581 tccgccagtg aagctgctga tgggagctcc accctgggag ggggtgccgg caccatggga
2641 ttgagcgccc gctacggacc ccagttcacc ctgcagcacg tgcccgacta ccgccagaat
2701 gtctacatcc caggcagcaa tgccacactg accaacgcag ctggcaagcg ggatggcaag
2761 gccccagcag gtggcaatgg caacaagaag aagtcgggca agaaggagaa gaagtaacat
2821 ggaggccagg ccaagagcca cagggcggcc tctccccaac cagcccagct tctccttacc
2881 tgcacccagg cctcagagtt tcagggctaa cccccagaat actggtaggg gccaaggcca
2941 tgctcccctt gggaaacaga aacaagtgcc cagtcagcac ctaccccttc ccccccaggg
3001 ggttgaatat gcaaaagcag ttccgctggg aacccccatc caatcaactg ctgtacccat
3061 gggggtagtg gggttactgt agacaccaag aaccatttgc cacaccccgt ttagttacag
3121 ctgaactcct ccatcttcca aatcaatcag gcccatccat cccatgcctc cctcctcccc
3181 accccactcc aacagttcct ctttcccgag taaggtggtt ggggtgttga agtaccaagt
3241 aacctacaag cctcctagtt ctgaaaagtt ggaagggcat catgacctct tggcctctcc
3301 tttgattctc aatcttcccc caaagcatgg tttggtgcca gccccttcac ctccttccag
3361 agcccaagat caatgctcaa gttttggagg acatgatcac catccccatg gtactgatgc
3421 ttgctggatt tagggagggc attttgctac caagcctctt cccaacgccc tggggaccag
3481 tcttctgttt tgtttttcat tgtttgacgt ttccactgca tgccttgact tcccccacct
3541 cctcctcaaa caagagactc cactgcatgt tccaagacag tatggggtgg taagataagg
3601 aagggaagtg tgtggatgtg gatggtgggg gcatggacaa agcttgacac atcaagttat
3661 caaggccttg gaggaggctc tgtatgtcct caggggactg acaacatcct ccagattcca
3721 gccataaacc aataactagg ctggaccctt cccactacat aatagggctc agcccaggca
3781 gccagctttg ggctgagcta acaggaccaa tggattaaac tggcatttca gtccaaggaa
3841 gctcgaagca ggtttaggac caggtcccct tgagaggtca gaggggcctc tgtgggtgct
3901 gggtactcca gaggtgccac tggtggaagg gtcagcggag ccccagcagg aagggtgggc
3961 cagccaggcc attcttagtc cctgggttgg ggaggcaggg agctagggca gggaccaaat
4021 gaacagaaag tctcagccca ggatggggct tcttcaacag ggcccctgcc ctcctgaagc
4081 ctcagtcctt caccttgcca ggtgccgttt ctcttccgtg aaggccactg cccaggtccc
4141 cagtgcgccc cctagtggcc atagcctggt taaagttccc cagtgcctcc ttgtgcatag
4201 accttcttct cccaccccct tctgcccctg ggtccccggc catccagcgg ggctgccaga
4261 gaaccccaga cctgccctta cagtagtgta gcgccccctc cctctttcgg ctggtgtaga
4321 atagccagta gtgtagtgcg gtgtgctttt acgtgatggc gggtgggcag cgggcggcgg
4381 gctccgcgca gccgtctgtc cttgatctgc ccgcggcggc ccgtgttgtg ttttgtgctg
4441 tgtccacgcg ctaaggcgac cccctccccc gtactgactt ctcctataag cgcttctctt
4501 cgcatagtca cgtagctccc accccaccct cttcctgtgt ctcacgcaag ttttatactc
4561 taatatttat atggcttttt ttcttcgaca aaaaaataat aaaacgtttc ttctgaaaag
4621 ctg
//