LOCUS AF152337 4611 bp mRNA linear HUM 22-JUL-1999
DEFINITION Homo sapiens protocadherin gamma C3 (PCDH-gamma-C3) mRNA, complete
cds.
ACCESSION AF152337
VERSION AF152337.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4611)
AUTHORS Wu,Q. and Maniatis,T.
TITLE A striking organization of a large family of human neural
cadherin-like cell adhesion genes
JOURNAL Cell 97 (6), 779-790 (1999)
PUBMED 10380929
REFERENCE 2 (bases 1 to 4611)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Human protocadherin genes
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4611)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-1999) Department of Molecular and Cellular
Biology, Harvard University, 7 Divinity Avenue, Cambridge, MA
02138, USA
FEATURES Location/Qualifiers
source 1..4611
/db_xref="H-InvDB:HIT000071763"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="5"
/map="5q31"
/tissue_type="brain"
gene 1..4611
/gene="PCDH-gamma-C3"
CDS 1..2805
/gene="PCDH-gamma-C3"
/function="cell-cell adhesion"
/note="member of the cadherin superfamily"
/codon_start=1
/product="protocadherin gamma C3"
/protein_id="AAD43731.1"
/translation="MVPEAWRSGLVSTGRVVGVLLLLGALNKASTVIHYEIPEEREKG
FAVGNVVANLGLDLGSLSARRFRVVSGASRRFFEVNRETGEMFVNDRLDREELCGTLP
SCTVTLELVVENPLELFSVEVVIQDINDNNPAFPTQEMKLEISEAVAPGTRFPLESAH
DPDVGSNSLQTYELSRNEYFALRVQTREDSTKYAELVLERALDREREPSLQLVLTALD
GGTPALSASLPIHIKVLDANDNAPVFNQSLYRARVLEDAPSGTRVVQVLATDLDEGPN
GEIIYSFGSHNRAGVRQLFALDLVTGMLTIKGRLDFEDTKLHEIYIQAKDKGANPEGA
HCKVLVEVVDVNDNAPEITVTSVYSPVPEDAPLGTVIALLSVTDLDAGENGLVTCEVP
PGLPFSLTSSLKNYFTLKTSADLDRETVPEYNLSITARDAGTPSLSALTIVRVQVSDI
NDNPPQSSQSSYDVYIEENNLPGAPILNLSVWDPDAPQNARLSFFLLEQGAETGLVGR
YFTINRDNGIVSSLVPLDYEDRREFELTAHISDGGTPVLATNISVNIFVTDRNDNAPQ
VLYPRPGGSSVEMLPRGTSAGHLVSRVVGWDADAGHNAWLSYSLLGSPNQSLFAIGLH
TGQISTARPVQDTDSPRQTLTVLIKDNGEPSLSTTATLTVSVTEDSPEARAEFPSGSA
PREQKKNLTFYLLLSLILVSVGFVVTVFGVIIFKVYKWKQSRDLYRAPVSSLYRTPGP
SLHADAVRGGLMSPHLYHQVYLTTDSRRSDPLLKKPGAASPLASRQNTLRSCDPVFYR
QVLGAESAPPGQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILA
SASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRD
GKAPAGGNGNKKKSGKKEKK"
BASE COUNT 1012 a 1372 c 1233 g 994 t
ORIGIN
1 atggtcccag aggcctggag gagcggactg gtaagcaccg ggagggtagt gggagttttg
61 cttctgcttg gtgccttgaa caaggcttcc acggtcattc actatgagat cccggaggaa
121 agagagaagg gtttcgctgt gggcaacgtg gtcgcgaacc ttggtttgga tctcggtagc
181 ctctcagccc gcaggttccg ggtggtgtct ggagctagcc gaagattctt tgaggtgaac
241 cgggagaccg gagagatgtt tgtgaacgac cgtctggatc gagaggagct gtgtgggaca
301 ctgccctctt gcactgtaac tctggagttg gtagtggaga acccgctgga gctgttcagc
361 gtggaagtgg tgatccagga catcaacgac aacaatcctg ctttccctac ccaggaaatg
421 aaattggaga ttagcgaggc cgtggctccg gggacgcgct ttccgctcga gagcgcgcac
481 gatcccgatg tgggaagcaa ctctttacaa acctatgagc tgagccgaaa tgaatacttt
541 gcgcttcgcg tgcagacgcg ggaggacagc accaagtacg cggagctggt gttggagcgc
601 gccctggacc gagaacggga gcctagtctc cagttagtgc tgacggcgtt ggacggaggg
661 accccagctc tctccgccag cctgcctatt cacatcaagg tgctggacgc gaatgacaat
721 gcgcctgtct tcaaccagtc cttgtaccgg gcgcgcgtcc tggaggatgc accctccggc
781 acgcgcgtgg tacaagtcct tgcaacggat ctggatgaag gccccaacgg tgaaattatt
841 tactccttcg gcagccacaa ccgcgccggc gtgcggcaac tattcgcctt agaccttgta
901 accgggatgc tgacaatcaa gggtcggctg gacttcgagg acaccaaact ccatgagatt
961 tacatccagg ccaaagacaa gggcgccaat cccgaaggag cacattgcaa agtgttggtg
1021 gaggttgtgg atgtgaatga caacgccccg gagatcacag tcacctccgt gtacagccca
1081 gtacccgagg atgcccctct ggggactgtc atcgctttgc tcagtgtgac tgacctggat
1141 gctggcgaga acgggctggt gacctgcgaa gttccaccgg gtctcccttt cagccttact
1201 tcttccctca agaattactt cactttgaaa accagtgcag acctggatcg ggagactgtg
1261 ccagaataca acctcagcat caccgcccga gacgccggaa ccccttccct ctcagccctt
1321 acaatagtgc gtgttcaagt gtccgacatc aatgacaacc ctccacaatc ttctcaatct
1381 tcctacgacg tttacattga agaaaacaac ctccccgggg ctccaatact aaacctaagt
1441 gtctgggacc ccgacgcccc gcagaatgct cggctttctt tctttctctt ggagcaagga
1501 gctgaaaccg ggctagtggg tcgctatttc acaataaatc gtgacaatgg catagtgtca
1561 tccttagtgc ccctagacta tgaggatcgg cgggaatttg aattaacagc tcatatcagc
1621 gatgggggca ccccggtcct agccaccaac atcagcgtga acatatttgt cactgatcgc
1681 aatgacaatg ccccccaggt cctatatcct cggccaggtg ggagctcggt ggagatgctg
1741 cctcgaggta cctcagctgg ccacctagtg tcacgggtgg taggctggga cgcggatgca
1801 gggcacaatg cctggctctc ctacagtctc ttgggatccc ctaaccagag cctttttgcc
1861 atagggctgc acactggtca aatcagtact gcccgtccag tccaagacac agattcaccc
1921 aggcagactc tcacggtctt gatcaaagac aatggggagc cttcgctctc caccactgct
1981 accctcactg tgtcagtaac cgaggactct cctgaagccc gagccgagtt cccctctggc
2041 tctgcccccc gggagcagaa aaaaaatctc accttttatc tacttctttc tctaatcctg
2101 gtttctgtgg ggtttgtggt cacagtgttc ggagtaatca tattcaaagt ttacaagtgg
2161 aagcagtcta gagacctata ccgagccccg gtgagctcac tgtaccgaac accagggccc
2221 tccttgcacg cggacgccgt gcggggaggc ctgatgtcgc cgcaccttta ccatcaggtg
2281 tatctcacca cggactcccg ccgcagcgac ccgctgctga agaaacctgg tgcagccagt
2341 ccactggcca gccgccagaa cacgctgcgg agctgtgatc cggtgttcta taggcaggtg
2401 ttgggtgcag agagcgcccc tcccggacag caagccccgc ccaacacgga ctggcgtttc
2461 tctcaggccc agagacccgg caccagcggc tcccaaaatg gcgatgacac cggcacctgg
2521 cccaacaacc agtttgacac agagatgctg caagccatga tcttggcgtc cgccagtgaa
2581 gctgctgatg ggagctccac cctgggaggg ggtgccggca ccatgggatt gagcgcccgc
2641 tacggacccc agttcaccct gcagcacgtg cccgactacc gccagaatgt ctacatccca
2701 ggcagcaatg ccacactgac caacgcagct ggcaagcggg atggcaaggc cccagcaggt
2761 ggcaatggca acaagaagaa gtcgggcaag aaggagaaga agtaacatgg aggccaggcc
2821 aagagccaca gggcggcctc tccccaacca gcccagcttc tccttacctg cacccaggcc
2881 tcagagtttc agggctaacc cccagaatac tggtaggggc caaggccatg ctccccttgg
2941 gaaacagaaa caagtgccca gtcagcacct accccttccc ccccaggggg ttgaatatgc
3001 aaaagcagtt ccgctgggaa cccccatcca atcaactgct gtacccatgg gggtagtggg
3061 gttactgtag acaccaagaa ccatttgcca caccccgttt agttacagct gaactcctcc
3121 atcttccaaa tcaatcaggc ccatccatcc catgcctccc tcctccccac cccactccaa
3181 cagttcctct ttcccgagta aggtggttgg ggtgttgaag taccaagtaa cctacaagcc
3241 tcctagttct gaaaagttgg aagggcatca tgacctcttg gcctctcctt tgattctcaa
3301 tcttccccca aagcatggtt tggtgccagc cccttcacct ccttccagag cccaagatca
3361 atgctcaagt tttggaggac atgatcacca tccccatggt actgatgctt gctggattta
3421 gggagggcat tttgctacca agcctcttcc caacgccctg gggaccagtc ttctgttttg
3481 tttttcattg tttgacgttt ccactgcatg ccttgacttc ccccacctcc tcctcaaaca
3541 agagactcca ctgcatgttc caagacagta tggggtggta agataaggaa gggaagtgtg
3601 tggatgtgga tggtgggggc atggacaaag cttgacacat caagttatca aggccttgga
3661 ggaggctctg tatgtcctca ggggactgac aacatcctcc agattccagc cataaaccaa
3721 taactaggct ggacccttcc cactacataa tagggctcag cccaggcagc cagctttggg
3781 ctgagctaac aggaccaatg gattaaactg gcatttcagt ccaaggaagc tcgaagcagg
3841 tttaggacca ggtccccttg agaggtcaga ggggcctctg tgggtgctgg gtactccaga
3901 ggtgccactg gtggaagggt cagcggagcc ccagcaggaa gggtgggcca gccaggccat
3961 tcttagtccc tgggttgggg aggcagggag ctagggcagg gaccaaatga acagaaagtc
4021 tcagcccagg atggggcttc ttcaacaggg cccctgccct cctgaagcct cagtccttca
4081 ccttgccagg tgccgtttct cttccgtgaa ggccactgcc caggtcccca gtgcgccccc
4141 tagtggccat agcctggtta aagttcccca gtgcctcctt gtgcatagac cttcttctcc
4201 cacccccttc tgcccctggg tccccggcca tccagcgggg ctgccagaga accccagacc
4261 tgcccttaca gtagtgtagc gccccctccc tctttcggct ggtgtagaat agccagtagt
4321 gtagtgcggt gtgcttttac gtgatggcgg gtgggcagcg ggcggcgggc tccgcgcagc
4381 cgtctgtcct tgatctgccc gcggcggccc gtgttgtgtt ttgtgctgtg tccacgcgct
4441 aaggcgaccc cctcccccgt actgacttct cctataagcg cttctcttcg catagtcacg
4501 tagctcccac cccaccctct tcctgtgtct cacgcaagtt ttatactcta atatttatat
4561 ggcttttttt cttcgacaaa aaaataataa aacgtttctt ctgaaaagct g
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