LOCUS AF152336 4596 bp mRNA linear HUM 22-JUL-1999
DEFINITION Homo sapiens protocadherin gamma B7 (PCDH-gamma-B7) mRNA, complete
cds.
ACCESSION AF152336
VERSION AF152336.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4596)
AUTHORS Wu,Q. and Maniatis,T.
TITLE A striking organization of a large family of human neural
cadherin-like cell adhesion genes
JOURNAL Cell 97 (6), 779-790 (1999)
PUBMED 10380929
REFERENCE 2 (bases 1 to 4596)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Human protocadherin genes
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4596)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-1999) Department of Molecular and Cellular
Biology, Harvard University, 7 Divinity Avenue, Cambridge, MA
02138, USA
FEATURES Location/Qualifiers
source 1..4596
/db_xref="H-InvDB:HIT000071762"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="5"
/map="5q31"
/tissue_type="brain"
gene 1..4596
/gene="PCDH-gamma-B7"
CDS 1..2790
/gene="PCDH-gamma-B7"
/function="cell-cell adhesion"
/note="member of the cadherin superfamily"
/codon_start=1
/product="protocadherin gamma B7"
/protein_id="AAD43730.1"
/translation="MGGSCAQRRRAGPRQVLFPLLLPLFYPTLCEPIRYSIPEELAKG
SVVGNLAKDLGLSVLDVSARELRVSAEKLHFSVDAQSGDLLVKDRIDREQICKERRRC
ELQLEAVVENPLNIFHVIVVIEDVNDHAPQFRKDEINLEISESVSLGMGTILESAEDP
DISMNSLSKYQLSPNEYFSLVEKDNPDGGKYPELVLQKTLDRETQSAHHLVLTALDGG
DPPRSGTAQIRILVIDANDNPPVFSQDVYRVSLREDVPPGTSILRVKATDQDEGINSE
ITYSFFGVADKAQHVFSLDYTTGNILTQQPLDFEEVERYTINIEAKDRGSLSTRCKVI
VEVVDENDNSPEIIITSLSDQIMEDSPPGVVVALFKTRDQDSGENGEVRCSLSRGVPF
KIHSSSNNYYKLVTDEALDREQTPEYNVTIAATDRGKPPLSSSKTITLHITDVNDNAP
VFGQSAYLVHVPENNQPGASIAQVSASDPDFGLNGRVSYSLIASDLESRTLSSYVSVS
AQSGVVFAQRAFDHEQLRTFELTLQARDQGSPALSANVSLRVLVGDRNDNAPRVLYPA
LGPDGSALFDTVPRAAQPGYLVTKVVAVDADSGHNAWLSYHVVQASEPGLFSLGLRTG
EVRMVRALGDKDSVRQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLPDFSDHPTPS
DSQAEMQFYLVVALALISVLFLLAVILAIALRLRQSFSPTAGDCFESVLCSKSGPVGP
PNYSEGTLPYAYNFCVPGDQMNPEFNFFTSVDHCPATQDNLNKDSMLLASILTPSVEA
DKKILKQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEA
ADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPA
GGNGNKKKSGKKEKK"
BASE COUNT 1053 a 1319 c 1216 g 1008 t
ORIGIN
1 atgggaggga gctgcgcgca gaggcgccgg gccggcccgc ggcaggtact atttcctttg
61 ctgctgcctt tgttctaccc cacgctgtgt gagccgatcc gctactcgat tccggaggag
121 ctggccaagg gctcggtggt ggggaacctc gctaaggatc tagggcttag tgtcctggat
181 gtgtcggctc gcgagctgcg agtgagcgcg gagaagctgc acttcagcgt agacgcgcag
241 agcggggact tacttgtgaa ggaccgaata gaccgtgagc aaatatgcaa agagagaaga
301 agatgtgagt tgcaattgga agctgtggtg gaaaatcctt taaatatttt tcatgtcatt
361 gtggtgattg aggatgttaa tgaccacgcc cctcaattcc ggaaagatga aataaactta
421 gaaatcagtg aatccgtcag cctggggatg ggaacaattc ttgagtctgc agaagatcct
481 gatattagta tgaattcgct gagcaaatac caactaagtc ctaacgagta tttctcattg
541 gtggagaaag acaatcctga tggtggcaaa tatccagaat tagtattgca gaagactctg
601 gaccgagaaa cgcagagcgc tcaccacttg gtactgaccg ccttagatgg tggggaccct
661 ccccgaagcg gtactgctca gataagaatc ctggtaatag atgccaatga caacccccca
721 gtgttcagcc aggacgtgta cagggttagc cttcgggaag acgtgcctcc aggcacctcc
781 atcctgagag tgaaggccac tgaccaggac gagggcatca actcagagat cacttattcc
841 ttctttggtg tggctgacaa agctcagcac gtgttctctc tggattacac tacaggaaac
901 attctaactc agcagccttt ggattttgaa gaagtagaaa gatatacgat aaacatagaa
961 gcaaaagacc gaggatctct ctcaacacgg tgtaaagtaa ttgtagaagt tgtagacgaa
1021 aacgacaaca gcccagaaat aatcatcacg tcactctctg atcagattat ggaggattcc
1081 cctccaggag tggttgttgc cctcttcaaa acacgggacc aagactcagg ggaaaatggg
1141 gaagtcaggt gtagcttaag tagaggtgtt ccatttaaga ttcattcttc ttctaataat
1201 tactacaagc tagtaacaga tgaggccctg gatcgggagc agaccccaga gtacaacgtc
1261 accatcgcag ccacagacag gggcaagcct ccgttatcct ccagcaaaac cataaccctg
1321 cacattactg acgtcaatga caacgcgccg gttttcggac agtcagccta cctggtccac
1381 gtgccagaaa acaaccagcc gggtgcctcc atagcgcaag tcagtgcctc tgacccagac
1441 ttcgggctca acggccgtgt ctcctactct ctcattgcca gcgacctgga gtcacgaacg
1501 ctgtcgtcct acgtgtccgt gagcgcgcag agcggggtgg tgttcgcgca gcgcgccttc
1561 gaccacgagc agctgcgcac cttcgagctc acgctgcagg cccgcgacca gggctcgccc
1621 gcgctcagcg ccaatgtgag cctgcgcgtg ttggtgggcg accgtaacga caacgcaccg
1681 cgggtgctgt accctgcgct gggtcccgac ggctccgcgc tcttcgacac agtgccgcgg
1741 gccgcgcagc caggctacct ggtgaccaag gtggtggccg tggacgcgga ctcggggcac
1801 aatgcctggc tgtcctacca cgtggtgcag gccagtgagc ccgggctctt cagcctgggg
1861 ctgcgaacag gcgaggtgcg catggtgcgt gctttgggtg acaaggactc ggtccgccag
1921 cgcctgctag tcgctgtaag agatggagga cagccacccc tttcagccac tgccacgctg
1981 cacctggtgt tcgcagatag cttgcaagag gtactgccgg atttcagcga ccatcccaca
2041 ccctctgact cccaggctga gatgcagttt tacctggtgg tggccttggc cttgatttct
2101 gtgctctttc tcctcgcggt gattctagct attgctctac gcctgcgaca gtctttcagc
2161 cctactgcag gagactgctt tgagtcagtt ctctgctcca agtccggacc tgtgggtccc
2221 cccaactaca gtgagggaac gttgccctat gcctataatt tttgtgtgcc tggggatcaa
2281 atgaatccag aatttaattt tttcacatct gttgatcatt gtccagccac acaagataac
2341 ctcaacaaag atagcatgct actggctagc attttaactc ccagcgttga agcagataag
2401 aagattctta aacagcaagc cccgcccaac acggactggc gtttctctca ggcccagaga
2461 cccggcacca gcggctccca aaatggcgat gacaccggca cctggcccaa caaccagttt
2521 gacacagaga tgctgcaagc catgatcttg gcgtccgcca gtgaagctgc tgatgggagc
2581 tccaccctgg gagggggtgc cggcaccatg ggattgagcg cccgctacgg accccagttc
2641 accctgcagc acgtgcccga ctaccgccag aatgtctaca tcccaggcag caatgccaca
2701 ctgaccaacg cagctggcaa gcgggatggc aaggccccag caggtggcaa tggcaacaag
2761 aagaagtcgg gcaagaagga gaagaagtaa catggaggcc aggccaagag ccacagggcg
2821 gcctctcccc aaccagccca gcttctcctt acctgcaccc aggcctcaga gtttcagggc
2881 taacccccag aatactggta ggggccaagg ccatgctccc cttgggaaac agaaacaagt
2941 gcccagtcag cacctacccc ttccccccca gggggttgaa tatgcaaaag cagttccgct
3001 gggaaccccc atccaatcaa ctgctgtacc catgggggta gtggggttac tgtagacacc
3061 aagaaccatt tgccacaccc cgtttagtta cagctgaact cctccatctt ccaaatcaat
3121 caggcccatc catcccatgc ctccctcctc cccaccccac tccaacagtt cctctttccc
3181 gagtaaggtg gttggggtgt tgaagtacca agtaacctac aagcctccta gttctgaaaa
3241 gttggaaggg catcatgacc tcttggcctc tcctttgatt ctcaatcttc ccccaaagca
3301 tggtttggtg ccagcccctt cacctccttc cagagcccaa gatcaatgct caagttttgg
3361 aggacatgat caccatcccc atggtactga tgcttgctgg atttagggag ggcattttgc
3421 taccaagcct cttcccaacg ccctggggac cagtcttctg ttttgttttt cattgtttga
3481 cgtttccact gcatgccttg acttccccca cctcctcctc aaacaagaga ctccactgca
3541 tgttccaaga cagtatgggg tggtaagata aggaagggaa gtgtgtggat gtggatggtg
3601 ggggcatgga caaagcttga cacatcaagt tatcaaggcc ttggaggagg ctctgtatgt
3661 cctcagggga ctgacaacat cctccagatt ccagccataa accaataact aggctggacc
3721 cttcccacta cataataggg ctcagcccag gcagccagct ttgggctgag ctaacaggac
3781 caatggatta aactggcatt tcagtccaag gaagctcgaa gcaggtttag gaccaggtcc
3841 ccttgagagg tcagaggggc ctctgtgggt gctgggtact ccagaggtgc cactggtgga
3901 agggtcagcg gagccccagc aggaagggtg ggccagccag gccattctta gtccctgggt
3961 tggggaggca gggagctagg gcagggacca aatgaacaga aagtctcagc ccaggatggg
4021 gcttcttcaa cagggcccct gccctcctga agcctcagtc cttcaccttg ccaggtgccg
4081 tttctcttcc gtgaaggcca ctgcccaggt ccccagtgcg ccccctagtg gccatagcct
4141 ggttaaagtt ccccagtgcc tccttgtgca tagaccttct tctcccaccc ccttctgccc
4201 ctgggtcccc ggccatccag cggggctgcc agagaacccc agacctgccc ttacagtagt
4261 gtagcgcccc ctccctcttt cggctggtgt agaatagcca gtagtgtagt gcggtgtgct
4321 tttacgtgat ggcgggtggg cagcgggcgg cgggctccgc gcagccgtct gtccttgatc
4381 tgcccgcggc ggcccgtgtt gtgttttgtg ctgtgtccac gcgctaaggc gaccccctcc
4441 cccgtactga cttctcctat aagcgcttct cttcgcatag tcacgtagct cccaccccac
4501 cctcttcctg tgtctcacgc aagttttata ctctaatatt tatatggctt tttttcttcg
4561 acaaaaaaat aataaaacgt ttcttctgaa aagctg
//