LOCUS AF152334 4578 bp mRNA linear HUM 22-JUL-1999 DEFINITION Homo sapiens protocadherin gamma B5 (PCDH-gamma-B5) mRNA, complete cds. ACCESSION AF152334 VERSION AF152334.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4578) AUTHORS Wu,Q. and Maniatis,T. TITLE A striking organization of a large family of human neural cadherin-like cell adhesion genes JOURNAL Cell 97 (6), 779-790 (1999) PUBMED 10380929 REFERENCE 2 (bases 1 to 4578) AUTHORS Wu,Q. and Maniatis,T. TITLE Human protocadherin genes JOURNAL Unpublished REFERENCE 3 (bases 1 to 4578) AUTHORS Wu,Q. and Maniatis,T. TITLE Direct Submission JOURNAL Submitted (17-MAY-1999) Department of Molecular and Cellular Biology, Harvard University, 7 Divinity Avenue, Cambridge, MA 02138, USA FEATURES Location/Qualifiers source 1..4578 /db_xref="H-InvDB:HIT000071760" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="5" /map="5q31" /tissue_type="brain" gene 1..4578 /gene="PCDH-gamma-B5" CDS 1..2772 /gene="PCDH-gamma-B5" /function="cell-cell adhesion" /note="member of the cadherin superfamily" /codon_start=1 /product="protocadherin gamma B5" /protein_id="AAD43728.1" /translation="MGSGAGELGRAERLPVLFLFLLSLFCPALCEQIRYRIPEEMPKG SVVGNLATDLGFSVQELPTRKLRVSSEKPYFTVSAESGELLVSSRLDREEICGKKPAC ALEFEAVAENPLNFYHVNVEIEDINDHTPKFTQNSFELQISESAQPGTRFILEVAEDA DIGLNSLQKYKLSLNPSFSLIIKEKQDGSKYPELALEKTLDREQQSYHRLVLTALDGG HPPLSGTTELRIQVTDANDNPPVFNRDVYRVSLRENVPPGTTVLQVSATDQDEGINSE ITYSFYRTGQIFSLNSKSGEITTQKKLDFEETKEYSMVVEGRDGGGLVAQCTVEINIQ DENDNSPEVTFHSLLEMILENAVPGTLIALIKIHDQDSGENGEVNCQLQGEVPFKIIS SSKNSYKLVTDGTLDREQTPEYNVTITATDRGKPPLSSSISVILHIRDVNDNAPVFHQ ASYLVSVPENNPPGASIAQVCASDLDLGLNGQVSYSIMASDLEPLALASYVSMSAQSG VVFAQRAFDYEQLRTFELTLQARDQGSPALSANVSLRVLVGDRNDNAPRVLYPALGPD GSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRT ARALGDRDAARQRLLVAVRDGGQPPLSATATLHLVFADSLQEVLPDITDRPVPSDPQA ELQFYLVVALALISVLFLLAVILAVALRLRRSSSPAAWSCFQPGLCVKSGPVVPPNYS QGTLPYSYNLCVAHTGKTEFNFLKCSEQLSSGQDILCGDSSGALFPLCNSSESTSHPE LQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSST LGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNK KKSGKKEKK" BASE COUNT 1046 a 1328 c 1199 g 1005 t ORIGIN 1 atggggagcg gcgccgggga gctgggccgg gctgagaggc tgccagtgct ctttctcttc 61 ctgctgtctt tgttctgccc ggcgctctgt gagcagatcc gctacaggat tcccgaggaa 121 atgcccaagg gctccgtagt ggggaacctc gccacggacc tggggttcag cgtccaggag 181 ttaccgactc gaaaactgcg cgtcagttcg gagaagcctt acttcaccgt gagcgcagag 241 agcggggagt tgcttgtgag cagcaggcta gacagggagg agatatgcgg gaagaagcca 301 gcttgtgctc tggaatttga ggctgttgct gaaaatccac tgaactttta tcacgtgaat 361 gtggagatcg aggacattaa tgaccacacg ccaaaattca cgcaaaattc ctttgagctg 421 caaataagtg agtctgcaca gcctggcaca agatttatac tagaagtagc agaagatgca 481 gatattggct taaactctct gcagaagtat aaactctctc ttaacccaag tttctcatta 541 ataattaagg agaaacagga tggtagtaaa tacccggaac tggcactgga gaaaacctta 601 gaccgggaac aacagagtta ccatcgttta gtcctgactg ccttggacgg tggacatcca 661 cccctaagcg gcaccactga gctccggatc caggtaaccg acgccaatga taatcccccg 721 gtattcaacc gagacgtgta cagagtcagc cttcgggaaa acgtgccacc aggcaccact 781 gtgttgcaag tgtcagccac tgaccaagac gagggcatca actcagaaat tacttattcc 841 ttctacagaa ccgggcaaat ctttagtctg aattcaaaga gcggagaaat taccactcaa 901 aagaaactgg attttgaaga gaccaaggaa tattcaatgg ttgtagaagg gagggatggt 961 ggtggactgg ttgcacaatg tacagttgaa attaatattc aagatgaaaa tgacaatagc 1021 ccagaagtta cattccattc tctacttgaa atgattctgg aaaacgcggt gcctggaaca 1081 ctaattgctt tgatcaaaat acatgaccaa gattctgggg aaaatgggga ggttaattgt 1141 caattacaag gcgaagtccc ttttaagatt atctcttcat ccaaaaattc gtataagttg 1201 gtaacagatg gaaccctaga ccgagagcaa accccggagt acaatgtcac catcacagcc 1261 acagacaggg gcaagccgcc cctctcctcc agcataagcg tcatcctaca tatcagagac 1321 gtcaacgata acgctccggt tttccaccag gcgtcctact tagtcagtgt acccgaaaac 1381 aaccctcctg gggcctccat cgcgcaagtc tgcgcctcgg acctggactt ggggttgaac 1441 ggccaagtct cctactctat catggccagc gacctagagc ctctggcact ggcctcttac 1501 gtgtccatga gcgcgcaaag tggggtggtg ttcgcgcagc gcgcctttga ctacgagcag 1561 ctgcgcacct tcgaactcac actacaggcc cgcgaccagg gctcgcctgc gctcagcgca 1621 aacgtgagcc tgcgcgtgtt ggtgggcgac cgaaacgaca acgcaccgcg ggtgctgtac 1681 cccgcgctgg gtcccgacgg ctctgcgctc ttcgatatgg tgccgcgcgc tgcagagccc 1741 ggctacctgg tgaccaaggt agtggccgtg gacgcagact caggacacaa cgcctggctg 1801 tcctaccacg tgctgcaggc tagcgagccc gggctcttca gcctggggct gcgcacagga 1861 gaggtgcgca cagcgcgtgc cttgggcgac agggacgcgg cccgccagcg cctgctggtt 1921 gctgtgcgtg atggtggaca gccgccactc tccgccaccg ccacgctgca cttggtcttt 1981 gctgacagct tgcaggaggt gctgccggat atcactgacc gccctgtacc ctctgacccc 2041 caggctgagc tgcagtttta cctagtggtg gccttggcct tgatctcagt gctcttcctc 2101 ctggccgtga ttctggccgt tgccttgcgc ctgcgacgct cctccagccc tgccgcctgg 2161 agctgcttcc aacctggtct ctgtgtcaag tctggacctg tggttccccc caactacagt 2221 caggggactt tgccttattc ctacaaccta tgtgttgcac atacaggaaa gacggagttt 2281 aatttcctaa aatgtagtga gcaattgagt tcaggacaag acatactttg tggtgattca 2341 tctggggcct tatttccact ttgtaattcc agcgagtcga cttcccatcc tgagttgcaa 2401 gccccgccca acacggactg gcgtttctct caggcccaga gacccggcac cagcggctcc 2461 caaaatggcg atgacaccgg cacctggccc aacaaccagt ttgacacaga gatgctgcaa 2521 gccatgatct tggcgtccgc cagtgaagct gctgatggga gctccaccct gggagggggt 2581 gccggcacca tgggattgag cgcccgctac ggaccccagt tcaccctgca gcacgtgccc 2641 gactaccgcc agaatgtcta catcccaggc agcaatgcca cactgaccaa cgcagctggc 2701 aagcgggatg gcaaggcccc agcaggtggc aatggcaaca agaagaagtc gggcaagaag 2761 gagaagaagt aacatggagg ccaggccaag agccacaggg cggcctctcc ccaaccagcc 2821 cagcttctcc ttacctgcac ccaggcctca gagtttcagg gctaaccccc agaatactgg 2881 taggggccaa ggccatgctc cccttgggaa acagaaacaa gtgcccagtc agcacctacc 2941 ccttcccccc cagggggttg aatatgcaaa agcagttccg ctgggaaccc ccatccaatc 3001 aactgctgta cccatggggg tagtggggtt actgtagaca ccaagaacca tttgccacac 3061 cccgtttagt tacagctgaa ctcctccatc ttccaaatca atcaggccca tccatcccat 3121 gcctccctcc tccccacccc actccaacag ttcctctttc ccgagtaagg tggttggggt 3181 gttgaagtac caagtaacct acaagcctcc tagttctgaa aagttggaag ggcatcatga 3241 cctcttggcc tctcctttga ttctcaatct tcccccaaag catggtttgg tgccagcccc 3301 ttcacctcct tccagagccc aagatcaatg ctcaagtttt ggaggacatg atcaccatcc 3361 ccatggtact gatgcttgct ggatttaggg agggcatttt gctaccaagc ctcttcccaa 3421 cgccctgggg accagtcttc tgttttgttt ttcattgttt gacgtttcca ctgcatgcct 3481 tgacttcccc cacctcctcc tcaaacaaga gactccactg catgttccaa gacagtatgg 3541 ggtggtaaga taaggaaggg aagtgtgtgg atgtggatgg tgggggcatg gacaaagctt 3601 gacacatcaa gttatcaagg ccttggagga ggctctgtat gtcctcaggg gactgacaac 3661 atcctccaga ttccagccat aaaccaataa ctaggctgga cccttcccac tacataatag 3721 ggctcagccc aggcagccag ctttgggctg agctaacagg accaatggat taaactggca 3781 tttcagtcca aggaagctcg aagcaggttt aggaccaggt ccccttgaga ggtcagaggg 3841 gcctctgtgg gtgctgggta ctccagaggt gccactggtg gaagggtcag cggagcccca 3901 gcaggaaggg tgggccagcc aggccattct tagtccctgg gttggggagg cagggagcta 3961 gggcagggac caaatgaaca gaaagtctca gcccaggatg gggcttcttc aacagggccc 4021 ctgccctcct gaagcctcag tccttcacct tgccaggtgc cgtttctctt ccgtgaaggc 4081 cactgcccag gtccccagtg cgccccctag tggccatagc ctggttaaag ttccccagtg 4141 cctccttgtg catagacctt cttctcccac ccccttctgc ccctgggtcc ccggccatcc 4201 agcggggctg ccagagaacc ccagacctgc ccttacagta gtgtagcgcc ccctccctct 4261 ttcggctggt gtagaatagc cagtagtgta gtgcggtgtg cttttacgtg atggcgggtg 4321 ggcagcgggc ggcgggctcc gcgcagccgt ctgtccttga tctgcccgcg gcggcccgtg 4381 ttgtgttttg tgctgtgtcc acgcgctaag gcgaccccct cccccgtact gacttctcct 4441 ataagcgctt ctcttcgcat agtcacgtag ctcccacccc accctcttcc tgtgtctcac 4501 gcaagtttta tactctaata tttatatggc tttttttctt cgacaaaaaa ataataaaac 4561 gtttcttctg aaaagctg //