LOCUS AF152332 4596 bp mRNA linear HUM 22-JUL-1999
DEFINITION Homo sapiens protocadherin gamma B3 (PCDH-gamma-B3) mRNA, complete
cds.
ACCESSION AF152332
VERSION AF152332.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4596)
AUTHORS Wu,Q. and Maniatis,T.
TITLE A striking organization of a large family of human neural
cadherin-like cell adhesion genes
JOURNAL Cell 97 (6), 779-790 (1999)
PUBMED 10380929
REFERENCE 2 (bases 1 to 4596)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Human protocadherin genes
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4596)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-1999) Department of Molecular and Cellular
Biology, Harvard University, 7 Divinity Avenue, Cambridge, MA
02138, USA
FEATURES Location/Qualifiers
source 1..4596
/db_xref="H-InvDB:HIT000071758"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="5"
/map="5q31"
/tissue_type="brain"
gene 1..4596
/gene="PCDH-gamma-B3"
CDS 1..2790
/gene="PCDH-gamma-B3"
/function="cell-cell adhesion"
/note="member of the cadherin superfamily"
/codon_start=1
/product="protocadherin gamma B3"
/protein_id="AAD43726.1"
/translation="MGNSSGWRGPAGQRRMLFLFLLSLLDQVLSEPIRYAIPEELDRG
SLVGNLAKDLGFGVGDLPTRNLRVIAEKKFFTVSPENGNLLVSDRIDREEICGKKSTC
VLEFEMVAEKPLNFFHVTVLIQDINDNPPTFSQNITELEISELALTGATFALESAQDP
DVGVNSLQQYYLSPDPHFSLIQKENLDGSRYPELVLKAPLDREEQPHHHLVLTAVDGG
EPSRSCTTQIRVIVADANDNPPVFTQDMYRVNVAENLPAGSSVLKVMAIDMDEGINAE
IIYAFINIGKEVRQLFKLDSKTGELTTIGELDFEERDSYTIGVEAKDGGHHTAYCKVQ
IDISDENDNAPEITLASESQHIQEDAELGTAVALIKTHDLDSGFNGEILCQLKGNFPF
KIVQDTKNTYRLVTDGALDREQIPEYNVTITATDKGNPPLSSSKTITLHILDVNDNVP
VFHQASYTVHVAENNPPGASIAHVRASDPDLGPNGLVSYYIVASDLEPRELSSYVSVS
ARSGVVFAQRAFDHEQLRAFELTLQARDQGSPTLSANVSLRVLVDDRNDNAPLVLYPA
LGPEGSALFDMVPRSAEPGYLVTKVVAVDADSGYNAWLSYHIVQASEPGLFSLGLRTG
EVRTARTLGDREAARQRLLVTVRDGGQQPLSATVMLHLIFADSLQEIQPDLSDRPTPS
DPQAELQFHLVVALALISVLFLLAVILAISLRLRCSSRPATEGYFQPGVCFKTVPGVL
PTYSERTLPYSYNPCAASHSSNTEFKFLNIKAENAAPQDLLCDEASWFESNDNPEMPS
NSGNLQKQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEA
ADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPA
GGNGNKKKSGKKEKK"
BASE COUNT 1062 a 1338 c 1189 g 1007 t
ORIGIN
1 atgggaaata gctccggatg gaggggccca gcagggcaga ggcgaatgct atttctcttc
61 ctgctctctt tgttagacca ggttctctcc gaaccgatcc gctacgctat tcccgaggag
121 ctggacaggg gctcgctggt agggaacctc gccaaggacc tggggtttgg cgtgggggat
181 ttacctacta ggaacctgcg ggttattgca gagaagaaat tctttaccgt gagccccgaa
241 aatgggaact tacttgtgag cgaccgtata gaccgagagg agatttgtgg caagaagtcg
301 acgtgtgttc tggaatttga aatggttgct gaaaagcctt taaacttttt tcatgtaact
361 gtgctgatcc aggatattaa cgacaaccca ccgaccttta gccaaaatat cactgagctg
421 gaaatcagcg aactggctct cactggagcc acatttgccc tggaatctgc gcaagatcct
481 gatgtaggtg tcaattcgct gcagcagtac tacctcagcc ctgatccgca cttctctttg
541 attcagaagg agaacctgga tggcagtagg tacccagagc tagtactgaa agcacccctg
601 gacagggaag agcagccaca tcaccacctg gtcctcacag ctgtggatgg gggcgagccc
661 tccagaagct gtaccaccca gatcagggta attgtcgcag atgcaaatga taacccccca
721 gtatttactc aggacatgta cagggtcaat gttgcagaga acctgcccgc tggctcctcc
781 gtattaaaag tgatggccat tgacatggat gagggcatca atgccgaaat catctatgcc
841 ttcatcaata ttggcaagga agtgagacaa ctgttcaagc tggacagtaa aacgggggaa
901 ctcaccacta ttggagaact ggactttgaa gagagagata gctacacaat tggggtggaa
961 gcaaaggatg gtggacatca cactgcatat tgtaaagtac agatagatat ttcagatgaa
1021 aatgacaatg ccccggagat aaccctggct tctgaatccc aacatataca agaagatgct
1081 gagctgggga ctgccgttgc cctgatcaaa acacatgatc tagattctgg atttaatgga
1141 gaaatcctat gccaactaaa aggaaacttc ccctttaaaa tcgttcaaga taccaaaaac
1201 acatacaggt tggtgacaga tggagccctg gaccgggagc agatcccaga atacaatgtg
1261 acgatcacag ctaccgacaa aggcaatcca ccgctctcct ccagcaagac catcactctg
1321 cacatccttg atgtcaacga caacgttccc gttttccacc aggcctccta caccgtgcat
1381 gtagctgaga acaatccgcc tggagcctcc attgcgcatg tcagagcctc ggatcccgac
1441 ttgggaccta atggccttgt ctcctactac atcgtggcca gtgacctgga gccgcgggag
1501 ctgtcgtcct acgtgtccgt gagcgcgcgg agcggggtgg tgttcgcgca gcgagccttc
1561 gaccacgagc agctgcgtgc cttcgagctc actctgcagg cccgcgacca gggctcgcct
1621 acgctcagcg ccaacgtgag cctgcgcgtg ttggtggacg accgcaacga caatgcaccg
1681 ctggtgctgt acccagctct ggggcccgaa ggctctgcgc tcttcgatat ggtgccgcgc
1741 tctgcagagc ctggctacct ggtgaccaag gtggtggcgg tggacgcaga ctcgggatac
1801 aacgcctggc tgtcctacca cattgtgcag gccagcgagc ccgggctgtt cagcctgggc
1861 ctgcgcacgg gtgaggtgcg cacggcgcgt accttgggcg acagggaggc cgcccgccag
1921 cgcctgctgg tcactgtgcg tgatggagga cagcagcctc tttcagccac cgtcatgctg
1981 cacctaatct tcgcagatag cttgcaagag atacaacctg accttagcga ccgccccact
2041 ccctctgacc ctcaggcgga gctacagttt cacctagtag tggcgttggc cttgatctca
2101 gtgctcttcc tcctcgcggt gattctggca atctccctgc gcctgcgatg ctcctccaga
2161 cccgccactg agggctactt tcagcctggt gtctgcttca agactgtacc tggagttctc
2221 cccacctaca gcgaaaggac tttgccttat tcctacaatc cgtgtgctgc ctcacattcc
2281 tcaaacaccg agtttaaatt tctcaatata aaggctgaaa atgctgcacc acaagatctt
2341 ctatgtgatg aagcctcttg gtttgaaagt aatgacaatc cagaaatgcc ttctaattca
2401 ggcaatttgc aaaagcaagc cccgcccaac acggactggc gtttctctca ggcccagaga
2461 cccggcacca gcggctccca aaatggcgat gacaccggca cctggcccaa caaccagttt
2521 gacacagaga tgctgcaagc catgatcttg gcgtccgcca gtgaagctgc tgatgggagc
2581 tccaccctgg gagggggtgc cggcaccatg ggattgagcg cccgctacgg accccagttc
2641 accctgcagc acgtgcccga ctaccgccag aatgtctaca tcccaggcag caatgccaca
2701 ctgaccaacg cagctggcaa gcgggatggc aaggccccag caggtggcaa tggcaacaag
2761 aagaagtcgg gcaagaagga gaagaagtaa catggaggcc aggccaagag ccacagggcg
2821 gcctctcccc aaccagccca gcttctcctt acctgcaccc aggcctcaga gtttcagggc
2881 taacccccag aatactggta ggggccaagg ccatgctccc cttgggaaac agaaacaagt
2941 gcccagtcag cacctacccc ttccccccca gggggttgaa tatgcaaaag cagttccgct
3001 gggaaccccc atccaatcaa ctgctgtacc catgggggta gtggggttac tgtagacacc
3061 aagaaccatt tgccacaccc cgtttagtta cagctgaact cctccatctt ccaaatcaat
3121 caggcccatc catcccatgc ctccctcctc cccaccccac tccaacagtt cctctttccc
3181 gagtaaggtg gttggggtgt tgaagtacca agtaacctac aagcctccta gttctgaaaa
3241 gttggaaggg catcatgacc tcttggcctc tcctttgatt ctcaatcttc ccccaaagca
3301 tggtttggtg ccagcccctt cacctccttc cagagcccaa gatcaatgct caagttttgg
3361 aggacatgat caccatcccc atggtactga tgcttgctgg atttagggag ggcattttgc
3421 taccaagcct cttcccaacg ccctggggac cagtcttctg ttttgttttt cattgtttga
3481 cgtttccact gcatgccttg acttccccca cctcctcctc aaacaagaga ctccactgca
3541 tgttccaaga cagtatgggg tggtaagata aggaagggaa gtgtgtggat gtggatggtg
3601 ggggcatgga caaagcttga cacatcaagt tatcaaggcc ttggaggagg ctctgtatgt
3661 cctcagggga ctgacaacat cctccagatt ccagccataa accaataact aggctggacc
3721 cttcccacta cataataggg ctcagcccag gcagccagct ttgggctgag ctaacaggac
3781 caatggatta aactggcatt tcagtccaag gaagctcgaa gcaggtttag gaccaggtcc
3841 ccttgagagg tcagaggggc ctctgtgggt gctgggtact ccagaggtgc cactggtgga
3901 agggtcagcg gagccccagc aggaagggtg ggccagccag gccattctta gtccctgggt
3961 tggggaggca gggagctagg gcagggacca aatgaacaga aagtctcagc ccaggatggg
4021 gcttcttcaa cagggcccct gccctcctga agcctcagtc cttcaccttg ccaggtgccg
4081 tttctcttcc gtgaaggcca ctgcccaggt ccccagtgcg ccccctagtg gccatagcct
4141 ggttaaagtt ccccagtgcc tccttgtgca tagaccttct tctcccaccc ccttctgccc
4201 ctgggtcccc ggccatccag cggggctgcc agagaacccc agacctgccc ttacagtagt
4261 gtagcgcccc ctccctcttt cggctggtgt agaatagcca gtagtgtagt gcggtgtgct
4321 tttacgtgat ggcgggtggg cagcgggcgg cgggctccgc gcagccgtct gtccttgatc
4381 tgcccgcggc ggcccgtgtt gtgttttgtg ctgtgtccac gcgctaaggc gaccccctcc
4441 cccgtactga cttctcctat aagcgcttct cttcgcatag tcacgtagct cccaccccac
4501 cctcttcctg tgtctcacgc aagttttata ctctaatatt tatatggctt tttttcttcg
4561 acaaaaaaat aataaaacgt ttcttctgaa aagctg
//