LOCUS AF152330 4590 bp mRNA linear HUM 22-JUL-1999 DEFINITION Homo sapiens protocadherin gamma B1 (PCDH-gamma-B1) mRNA, complete cds. ACCESSION AF152330 VERSION AF152330.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4590) AUTHORS Wu,Q. and Maniatis,T. TITLE A striking organization of a large family of human neural cadherin-like cell adhesion genes JOURNAL Cell 97 (6), 779-790 (1999) PUBMED 10380929 REFERENCE 2 (bases 1 to 4590) AUTHORS Wu,Q. and Maniatis,T. TITLE Human protocadherin genes JOURNAL Unpublished REFERENCE 3 (bases 1 to 4590) AUTHORS Wu,Q. and Maniatis,T. TITLE Direct Submission JOURNAL Submitted (17-MAY-1999) Department of Molecular and Cellular Biology, Harvard University, 7 Divinity Avenue, Cambridge, MA 02138, USA FEATURES Location/Qualifiers source 1..4590 /db_xref="H-InvDB:HIT000071756" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="5" /map="5q31" /tissue_type="brain" gene 1..4590 /gene="PCDH-gamma-B1" CDS 1..2784 /gene="PCDH-gamma-B1" /function="cell-cell adhesion" /note="member of the cadherin superfamily" /codon_start=1 /product="protocadherin gamma B1" /protein_id="AAD43724.1" /translation="MQRAREAEMMKSQVLFPFLLSLFCGAISQQIRYTIPEELANGSR VGKLAKDLGLSVRELPTRKLRVSAEDYFNVSLESGDLLVNGRIDREKICGRKLECALE FETVAENPMNVFHVVVVIQDINDNAPRFVAKGIDLEICESALPGVKFSLDSAQDADVE GNSLKLYTINPNQYFSLSTKESPDGSKYPVLLLEKPLDREHQSSHRLILTAMDGGDPP LSGTTHIWIRVTDANDNAPVFSQEVYRVSLQENVPWGTSVLRVMATDQDEGINAEITY AFLNSPISTSLFNLNPNTGDITTNGTLDFEETSRYVLSVEAKDGGVHTAHCNVQIEIV DENDNAPEVTFMSFSNQIPEDSDLGTVIALIKVRDKDSGQNGMVTCYTQEEVPFKLES TSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALSSRTSITLHISDINDNAPVFHQ ASYVVHVSENNPPGASIAQVSASDPDLGPNGRVSYSILASDLEPRELLSYVSVSPQSG VVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLNDNAPRVLYPALGPD GSALFDMVPRAAEPGYLVTKVVAVDADSGHNAWLSYHVLQASEPGLFSLGLRTGEVRT ARALGDRDAARQRLLVAVRDGGQPPLSATATLHLIFADSLQEVLPDLSDRPEPSDPQT ELQFYLVVALALISVLFLLAVILAIALRLRRSSSLDTEGCFQTGLCSKSGPGVPPNHS EGTLPYSYNLCIASHSAKTEFNSLNLTPEMAPPQDLLCDDPSMVVCASNEDHKIAYDP SLSSHQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAAD GSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGG NGNKKKSGKKEKK" BASE COUNT 1049 a 1343 c 1189 g 1009 t ORIGIN 1 atgcagagag ccagagaagc cgaaatgatg aaaagtcagg tactgtttcc cttcctgctg 61 tctttgttct gcggggccat ctcccagcag atccgataca cgattccaga ggagctagcc 121 aacggctcac gggtggggaa acttgccaag gatctggggc tcagtgtccg ggagttgcca 181 actcgaaaac tgcgggttag tgcagaggat tatttcaacg ttagtttgga gagcggggat 241 ttgttagtga acggtaggat agatcgagag aagatttgcg gaaggaaact tgagtgtgca 301 ctagaattcg aaacggtcgc tgaaaaccca atgaatgttt tccacgtggt tgttgtaatc 361 caagatatta atgacaatgc accacgtttc gttgcaaaag gcattgactt agaaatttgt 421 gagtcagcct tacccggggt aaaattctct ctggattctg ctcaagatgc agatgtggaa 481 ggcaattcac tgaagttata caccatcaac cccaatcaat acttctctct gtcaacgaag 541 gaaagtcctg atggaagtaa atatccggta ttactgctgg aaaaacctct agacagggaa 601 catcagagct ctcatcgctt aatcctgact gccatggatg gcggggaccc gcctctaagc 661 ggcaccaccc atatctggat ccgagttacg gatgccaatg ataatgctcc cgtgtttagc 721 caggaggtat acagggttag cctccaagaa aacgtaccgt ggggaacctc cgtgctgcgg 781 gtgatggcca cagaccagga tgagggcatt aatgcagaga tcacctatgc cttcctcaat 841 tccccaataa gtaccagcct cttcaatctc aatccaaata ctggcgacat cacaaccaat 901 ggcacattgg attttgaaga gacaagtaga tatgtgttga gtgtggaagc taaggatgga 961 ggagtacaca cagctcactg taatgttcaa atagaaattg ttgacgagaa tgacaatgcc 1021 ccagaggtga cattcatgtc cttctctaac cagattccag aggattcaga ccttggaact 1081 gtaatagccc tcataaaagt gcgagacaag gattctgggc aaaatggcat ggtgacatgc 1141 tatactcagg aagaagttcc tttcaaatta gaatccacct cgaagaatta ttacaagctg 1201 gtgattgctg gagccctaaa ccgggagcag acagcagact acaacgtcac aatcatagcc 1261 accgacaagg gcaaaccagc cctttcctcc aggacaagca tcaccctgca catctccgac 1321 atcaacgaca atgcacctgt tttccatcag gcctcctatg tggtccacgt gtctgagaac 1381 aacccacctg gcgcctccat tgcacaagta agcgcctccg acccggattt gggacccaac 1441 ggcagagtct cctactctat tctggccagt gacctggagc cgcgggagct gttgtcctac 1501 gtgtccgtga gcccgcagag cggggtggtg ttcgcgcagc gcgccttcga ccacgagcag 1561 ctgcgcgcct tcgagctcac actgcaggcc agggaccagg gctcccccgc gctcagcgcc 1621 aacgtgagcc tgcgcgtgtt ggtgggcgac ctcaatgaca atgcgccacg ggtgctgtac 1681 cccgcgctgg ggcctgatgg ctccgccctc ttcgatatgg tgccacgcgc cgcagagccc 1741 ggctacctgg tgaccaaggt ggtggcggtg gacgcagact caggacacaa cgcttggctg 1801 tcctaccacg tgctgcaggc cagcgagccc gggctcttca gcctggggtt gcgcacgggt 1861 gaggtgcgca cagcgcgtgc cttgggcgac agggacgcgg cccgccagcg cctgctggtc 1921 gctgtgcgtg atggaggaca gccgccactc tccgccaccg ccacgctgca cctaatcttc 1981 gcggatagcc tgcaagaggt attgccagac ctcagcgacc gccctgagcc ctctgacccc 2041 cagacggaac tgcagtttta cctggttgtg gccttggcct tgatctcagt gctctttctc 2101 ctcgcggtga ttctagcgat cgccctgcgc ctgcgacgtt cctccagcct cgacactgag 2161 ggctgctttc aaaccggtct ctgctccaag tctgggcccg gggttcctcc caaccacagc 2221 gaggggactt tgccctattc ctacaatcta tgtattgcct ctcattctgc aaagacagag 2281 tttaattctc tcaacctgac accggaaatg gctccccctc aggatctgct gtgtgatgat 2341 ccttctatgg ttgtatgtgc cagtaatgaa gatcacaaaa tcgcttatga cccttctttg 2401 tcttcgcacc aagccccgcc caacacggac tggcgtttct ctcaggccca gagacccggc 2461 accagcggct cccaaaatgg cgatgacacc ggcacctggc ccaacaacca gtttgacaca 2521 gagatgctgc aagccatgat cttggcgtcc gccagtgaag ctgctgatgg gagctccacc 2581 ctgggagggg gtgccggcac catgggattg agcgcccgct acggacccca gttcaccctg 2641 cagcacgtgc ccgactaccg ccagaatgtc tacatcccag gcagcaatgc cacactgacc 2701 aacgcagctg gcaagcggga tggcaaggcc ccagcaggtg gcaatggcaa caagaagaag 2761 tcgggcaaga aggagaagaa gtaacatgga ggccaggcca agagccacag ggcggcctct 2821 ccccaaccag cccagcttct ccttacctgc acccaggcct cagagtttca gggctaaccc 2881 ccagaatact ggtaggggcc aaggccatgc tccccttggg aaacagaaac aagtgcccag 2941 tcagcaccta ccccttcccc cccagggggt tgaatatgca aaagcagttc cgctgggaac 3001 ccccatccaa tcaactgctg tacccatggg ggtagtgggg ttactgtaga caccaagaac 3061 catttgccac accccgttta gttacagctg aactcctcca tcttccaaat caatcaggcc 3121 catccatccc atgcctccct cctccccacc ccactccaac agttcctctt tcccgagtaa 3181 ggtggttggg gtgttgaagt accaagtaac ctacaagcct cctagttctg aaaagttgga 3241 agggcatcat gacctcttgg cctctccttt gattctcaat cttcccccaa agcatggttt 3301 ggtgccagcc ccttcacctc cttccagagc ccaagatcaa tgctcaagtt ttggaggaca 3361 tgatcaccat ccccatggta ctgatgcttg ctggatttag ggagggcatt ttgctaccaa 3421 gcctcttccc aacgccctgg ggaccagtct tctgttttgt ttttcattgt ttgacgtttc 3481 cactgcatgc cttgacttcc cccacctcct cctcaaacaa gagactccac tgcatgttcc 3541 aagacagtat ggggtggtaa gataaggaag ggaagtgtgt ggatgtggat ggtgggggca 3601 tggacaaagc ttgacacatc aagttatcaa ggccttggag gaggctctgt atgtcctcag 3661 gggactgaca acatcctcca gattccagcc ataaaccaat aactaggctg gacccttccc 3721 actacataat agggctcagc ccaggcagcc agctttgggc tgagctaaca ggaccaatgg 3781 attaaactgg catttcagtc caaggaagct cgaagcaggt ttaggaccag gtccccttga 3841 gaggtcagag gggcctctgt gggtgctggg tactccagag gtgccactgg tggaagggtc 3901 agcggagccc cagcaggaag ggtgggccag ccaggccatt cttagtccct gggttgggga 3961 ggcagggagc tagggcaggg accaaatgaa cagaaagtct cagcccagga tggggcttct 4021 tcaacagggc ccctgccctc ctgaagcctc agtccttcac cttgccaggt gccgtttctc 4081 ttccgtgaag gccactgccc aggtccccag tgcgccccct agtggccata gcctggttaa 4141 agttccccag tgcctccttg tgcatagacc ttcttctccc acccccttct gcccctgggt 4201 ccccggccat ccagcggggc tgccagagaa ccccagacct gcccttacag tagtgtagcg 4261 ccccctccct ctttcggctg gtgtagaata gccagtagtg tagtgcggtg tgcttttacg 4321 tgatggcggg tgggcagcgg gcggcgggct ccgcgcagcc gtctgtcctt gatctgcccg 4381 cggcggcccg tgttgtgttt tgtgctgtgt ccacgcgcta aggcgacccc ctcccccgta 4441 ctgacttctc ctataagcgc ttctcttcgc atagtcacgt agctcccacc ccaccctctt 4501 cctgtgtctc acgcaagttt tatactctaa tatttatatg gctttttttc ttcgacaaaa 4561 aaataataaa acgtttcttc tgaaaagctg //