LOCUS AF152329 4605 bp mRNA linear HUM 22-JUL-1999
DEFINITION Homo sapiens protocadherin gamma A9 (PCDH-gamma-A9) mRNA, complete
cds.
ACCESSION AF152329
VERSION AF152329.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4605)
AUTHORS Wu,Q. and Maniatis,T.
TITLE A striking organization of a large family of human neural
cadherin-like cell adhesion genes
JOURNAL Cell 97 (6), 779-790 (1999)
PUBMED 10380929
REFERENCE 2 (bases 1 to 4605)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Human protocadherin genes
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4605)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-1999) Department of Molecular and Cellular
Biology, Harvard University, 7 Divinity Avenue, Cambridge, MA
02138, USA
FEATURES Location/Qualifiers
source 1..4605
/db_xref="H-InvDB:HIT000071755"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="5"
/map="5q31"
/tissue_type="brain"
gene 1..4605
/gene="PCDH-gamma-A9"
CDS 1..2799
/gene="PCDH-gamma-A9"
/function="cell-cell adhesion"
/note="member of the cadherin superfamily"
/codon_start=1
/product="protocadherin gamma A9"
/protein_id="AAD43723.1"
/translation="MAAPTKCQLRGRLVLLCSLLGMLWEARASQIRYSVPEETEKGYI
VGNISKDLALEPRELAERRVRIVSRGRTQLFSLNPRSGTLVTAGRIDREELCAQSPRC
LVNFKVLVEDRVKLYGIEIEVTDINDSAPKFQAESLEVKINEIAVPGARYPLPEAIDP
DVGVNSLQSYQLSPNHHFSLNVQTGDNGAINPELVLERALDREEATAHHLVLTASDGG
EPRRSSTVRIHVTVLDTNDNAPVFAQRIYRVKVLENVPPGTWLLTATASDLDEGINGK
VAYKFWKINEKQSLLFQLNENTGEISTAKSLDYEECSFYEMEIQAEDGGGLKGWTKVL
ISVEDVNDNRPEVTITSLFSPVREDAPQGTVILLFNAHDRDSGKNGQVVCSIQENLSF
TLENSEEDYYRLLTAQILDREKASEYNITVTATDRGTPPLSTEIHITLQVTDINDNPP
AFSQASYSVYLPENNARGTSIFSVIAYDPDSNENSRVIYSLAEDTIQGSPLSTYVSIN
SDTGVLYALCSFDYEQFRDLQMQVTASDSGSPPLSSNVSLRLFVLDQNDNAPEILYPA
LPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLFKASEPGLFSVGLHTG
EVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAIADSIPDILADLGSLQIPA
DLEASDLTLYLVVAVAVVSCVFLTFVITLLALRLRHWHSSHLLRATSDGLAGVPTSHF
VGVDGVRAFLQTYSQEFSLTADSRKSHLIFPQPNYADTLISQQSCEKNEPLCVSVDSK
FPIEDTPLVPQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASA
SEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGK
APAGGNGNKKKSGKKEKK"
BASE COUNT 1082 a 1323 c 1169 g 1031 t
ORIGIN
1 atggcagctc caaccaaatg ccagctccgc ggaagattag tcctgctatg ctcgctcctg
61 gggatgctat gggaggccag ggccagtcag attcgctact cagtgcctga agagacagaa
121 aagggctata ttgtgggcaa catctccaag gacctggctc tggagccccg ggagctggcg
181 gagcgccgag tccgcatcgt ctctagaggt aggacgcagc ttttctctct gaacccgcgc
241 agcggcacct tggtcaccgc gggtaggata gaccgggagg agctctgtgc tcagagcccg
301 cggtgtctgg tgaactttaa agtcctggtt gaagacagag tgaaactgta cggaatagaa
361 atagaagtaa ctgatattaa cgacagcgcc ccaaagttcc aggccgaaag tctggaagta
421 aaaattaacg aaatcgcggt tcctggagca cgttatccac ttccagaagc tattgatccg
481 gatgttggcg tgaactccct ccagagctac cagctcagcc ccaatcacca cttctccctg
541 aacgtgcaga ctggagacaa tggagccata aacccagagc tggtgctgga gcgcgccctg
601 gacagggagg aggcaactgc ccaccacctg gtcctcacgg cctcggatgg cggcgagccg
661 cgtcgctcca gcacagtgcg catccatgtg acagtgttgg atacaaatga taatgccccg
721 gtttttgctc aacggattta ccgagttaaa gtccttgaga acgtgccccc aggcacctgg
781 ctgcttactg caacagccag cgacctggat gagggaatca acggaaaagt ggcatacaaa
841 ttctggaaaa ttaatgaaaa acaatctctg ctattccagc ttaatgaaaa tactggggaa
901 atatcaacag caaaaagtct agattatgaa gaatgttcat tttatgaaat ggaaatacaa
961 gctgaagatg gtgggggatt gaaagggtgg acaaaagtgc tcatttcggt ggaagatgta
1021 aatgacaata gacctgaagt gaccattaca tctctgttta gcccagtgag agaagacgca
1081 cctcagggaa cagtaattct tcttttcaat gctcatgacc gagactccgg gaagaatggt
1141 caagttgtct gttctatcca ggagaatcta tcttttacat tagaaaattc agaagaagat
1201 tattacagat tgttgacggc ccaaattctt gaccgagaaa aagcctcaga atataatatc
1261 acggtgactg caacagacag aggaactccg cccctgtcca cagaaattca catcaccctg
1321 caagtgactg acatcaatga taatccacct gctttctctc aagcctccta ctcagtctac
1381 ctcccggaaa acaacgccag aggtacttcc atcttctccg tgattgccta tgaccctgat
1441 agcaatgaga attctagagt tatttactcc ttggcagagg ataccatcca agggtctcct
1501 ctctccacct atgtctctat taactcagac actggtgtgc tgtatgctct gtgctccttt
1561 gactatgagc agtttagaga tttgcaaatg caggtgacgg caagtgacag tggaagccca
1621 ccacttagca gcaatgtgtc attgagactg tttgttttgg accagaatga caatgcccca
1681 gaaatcctgt accctgccct ccccactgat ggttctactg gtgtggagct ggcaccccgc
1741 tctgcagagc ctggctacct ggtgaccaag gtggtggcag tggacagaga ctcaggccag
1801 aatgcttggc tctcctaccg cctattcaag gccagtgagc cagggctctt ctcggtgggg
1861 ctgcacacag gtgaagtgcg cacagctcgg gccctgctag atagagatgc gctcaaacag
1921 agccttgtgg tggctgtaca ggaccatggc cagccccctc tctcggccac tgtcacgctc
1981 acagtagcca tagctgacag catcccagac atcctggctg acctgggcag tcttcagatc
2041 cctgcagacc tggaggcctc agaccttacc ctctacctcg ttgtggctgt ggcagtcgtc
2101 tcctgtgtct tcctcacctt cgttatcacg ctgctggccc tcaggctgag gcactggcac
2161 tcctcgcatc tgctgcgggc taccagtgat gggttggctg gtgtgcccac ctcacacttt
2221 gtgggtgtag atggggttcg agctttccta cagacctatt ctcaggagtt ctccctcacc
2281 gctgactcaa ggaagagtca cctgatcttc ccccagccca actatgcaga cacactcatc
2341 agccagcaga gctgtgagaa aaatgagcct ttgtgcgtct ctgttgattc caagtttcct
2401 atagaagaca cccctttggt tccgcaagcc ccgcccaaca cggactggcg tttctctcag
2461 gcccagagac ccggcaccag cggctcccaa aatggcgatg acaccggcac ctggcccaac
2521 aaccagtttg acacagagat gctgcaagcc atgatcttgg cgtccgccag tgaagctgct
2581 gatgggagct ccaccctggg agggggtgcc ggcaccatgg gattgagcgc ccgctacgga
2641 ccccagttca ccctgcagca cgtgcccgac taccgccaga atgtctacat cccaggcagc
2701 aatgccacac tgaccaacgc agctggcaag cgggatggca aggccccagc aggtggcaat
2761 ggcaacaaga agaagtcggg caagaaggag aagaagtaac atggaggcca ggccaagagc
2821 cacagggcgg cctctcccca accagcccag cttctcctta cctgcaccca ggcctcagag
2881 tttcagggct aacccccaga atactggtag gggccaaggc catgctcccc ttgggaaaca
2941 gaaacaagtg cccagtcagc acctacccct tcccccccag ggggttgaat atgcaaaagc
3001 agttccgctg ggaaccccca tccaatcaac tgctgtaccc atgggggtag tggggttact
3061 gtagacacca agaaccattt gccacacccc gtttagttac agctgaactc ctccatcttc
3121 caaatcaatc aggcccatcc atcccatgcc tccctcctcc ccaccccact ccaacagttc
3181 ctctttcccg agtaaggtgg ttggggtgtt gaagtaccaa gtaacctaca agcctcctag
3241 ttctgaaaag ttggaagggc atcatgacct cttggcctct cctttgattc tcaatcttcc
3301 cccaaagcat ggtttggtgc cagccccttc acctccttcc agagcccaag atcaatgctc
3361 aagttttgga ggacatgatc accatcccca tggtactgat gcttgctgga tttagggagg
3421 gcattttgct accaagcctc ttcccaacgc cctggggacc agtcttctgt tttgtttttc
3481 attgtttgac gtttccactg catgccttga cttcccccac ctcctcctca aacaagagac
3541 tccactgcat gttccaagac agtatggggt ggtaagataa ggaagggaag tgtgtggatg
3601 tggatggtgg gggcatggac aaagcttgac acatcaagtt atcaaggcct tggaggaggc
3661 tctgtatgtc ctcaggggac tgacaacatc ctccagattc cagccataaa ccaataacta
3721 ggctggaccc ttcccactac ataatagggc tcagcccagg cagccagctt tgggctgagc
3781 taacaggacc aatggattaa actggcattt cagtccaagg aagctcgaag caggtttagg
3841 accaggtccc cttgagaggt cagaggggcc tctgtgggtg ctgggtactc cagaggtgcc
3901 actggtggaa gggtcagcgg agccccagca ggaagggtgg gccagccagg ccattcttag
3961 tccctgggtt ggggaggcag ggagctaggg cagggaccaa atgaacagaa agtctcagcc
4021 caggatgggg cttcttcaac agggcccctg ccctcctgaa gcctcagtcc ttcaccttgc
4081 caggtgccgt ttctcttccg tgaaggccac tgcccaggtc cccagtgcgc cccctagtgg
4141 ccatagcctg gttaaagttc cccagtgcct ccttgtgcat agaccttctt ctcccacccc
4201 cttctgcccc tgggtccccg gccatccagc ggggctgcca gagaacccca gacctgccct
4261 tacagtagtg tagcgccccc tccctctttc ggctggtgta gaatagccag tagtgtagtg
4321 cggtgtgctt ttacgtgatg gcgggtgggc agcgggcggc gggctccgcg cagccgtctg
4381 tccttgatct gcccgcggcg gcccgtgttg tgttttgtgc tgtgtccacg cgctaaggcg
4441 accccctccc ccgtactgac ttctcctata agcgcttctc ttcgcatagt cacgtagctc
4501 ccaccccacc ctcttcctgt gtctcacgca agttttatac tctaatattt atatggcttt
4561 ttttcttcga caaaaaaata ataaaacgtt tcttctgaaa agctg
//