LOCUS AF152325 4602 bp mRNA linear HUM 22-JUL-1999
DEFINITION Homo sapiens protocadherin gamma A5 (PCDH-gamma-A5) mRNA, complete
cds.
ACCESSION AF152325
VERSION AF152325.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4602)
AUTHORS Wu,Q. and Maniatis,T.
TITLE A striking organization of a large family of human neural
cadherin-like cell adhesion genes
JOURNAL Cell 97 (6), 779-790 (1999)
PUBMED 10380929
REFERENCE 2 (bases 1 to 4602)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Human protocadherin genes
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4602)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-1999) Department of Molecular and Cellular
Biology, Harvard University, 7 Divinity Avenue, Cambridge, MA
02138, USA
FEATURES Location/Qualifiers
source 1..4602
/db_xref="H-InvDB:HIT000071751"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="5"
/map="5q31"
/tissue_type="brain"
gene 1..4602
/gene="PCDH-gamma-A5"
CDS 1..2796
/gene="PCDH-gamma-A5"
/function="cell-cell adhesion"
/note="member of the cadherin superfamily"
/codon_start=1
/product="protocadherin gamma A5"
/protein_id="AAD43719.1"
/translation="MASPPRGWGCGELLLPFMLLGTLCEPGSGQIRYSMPEELDKGSF
VGNIAKDLGLEPQELAERGVRIVSRGRTQLFALNPRSGSLVTAGRIDREELCAQSPLC
VVNFNILVENKMKIYGVEVEIIDINDNFPRFRDEELKVKVNENAAAGTRLVLPFARDA
DVGVNSLRSYQLSSNLHFSLDVVSGTDGQKYPELVLEQPLDREKETVHDLLLTALDGG
DPVLSGTTHIRVTVLDANDNAPLFTPSEYSVSVPENIPVGTRLLMLTATDPDEGINGK
LTYSFRNEEEKISETFQLDSNLGEISTLQSLDYEESRFYLMEVVAQDGGALVASAKVV
VTVQDVNDNAPEVILTSLTSSISEDCLPGTVIALFSVHDGDSGENGEIACSIPRNLPF
KLEKSVDNYYHLLTTRDLDREETSDYNITLTVMDHGTPPLSTESHIPLKVADVNDNPP
NFPQASYSTSVTENNPRGVSIFSVTAHDPDSGDNARVTYSLAEDTFQGAPLSSYVSIN
SDTGVLYALRSFDYEQLRDLQLWVTASDSGNPPLSSNVSLSLFVLDQNDNTPEILYPA
LPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFAVGLHTG
EVRTARALLDRDALKQSLVVAVEDHGQPPLSATFTVTVAVADRIPDILADLGSIKTPI
DPEDLDLTLYLVVAVAAVSCVFLAFVIVLLVLRLRRWHKSRLLQAEGSRLAGVPASHF
VGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLLSEESCEKSEPLLMSDKVD
ANKEERRVQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASAS
EAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKA
PAGGNGNKKKSGKKEKK"
BASE COUNT 1037 a 1354 c 1215 g 996 t
ORIGIN
1 atggcgagtc cacctagggg ctggggctgc ggagagctgc tgctgccctt catgctcctg
61 gggacgctgt gcgagccagg atccgggcag atccgctact cgatgccgga ggagctggac
121 aaaggctcct tcgtcggcaa catagccaag gaccttgggc tggagcccca ggagctggcg
181 gagcgcggag tccgcatcgt ctccagaggt aggacgcagc tttttgccct gaacccgcga
241 agcggcagct tggtcaccgc gggcaggata gaccgggagg agctctgcgc tcagagccca
301 ctgtgtgtgg tgaactttaa catcttggtt gagaacaaaa tgaaaattta tggagtagaa
361 gtagaaataa tcgatattaa tgataacttc ccgcgtttcc gggatgaaga gttaaaagta
421 aaagttaatg aaaatgcggc tgcagggaca cggttagtgc ttcccttcgc gcgggatgcg
481 gatgtgggtg tgaactctct ccggagttac cagctcagct ccaatctgca cttctctctg
541 gatgtggtaa gcggaactga tggacaaaag tatccggagc tggtgttgga acagccccta
601 gaccgcgaga aagagactgt tcacgacctc ctcctcacag ctttagatgg cggagacccg
661 gtactctccg gcaccacgca catccgtgtt acggtcctcg acgcaaacga caatgcgccc
721 ctgttcaccc catccgagta cagcgtgagt gttccagaga acatacctgt gggcactcgg
781 ctgctcatgc taaccgccac ggatccagat gagggaataa acgggaaatt gacctactct
841 tttcgcaatg aagaagaaaa aatttcggag actttccaac ttgattccaa cctgggggaa
901 atctcaactc tacaatcact ggactatgaa gaatccagat tctacctcat ggaagtggta
961 gctcaggatg gaggcgctct tgttgccagc gctaaggtgg tggtcacagt acaggacgtg
1021 aatgacaatg cccccgaagt gatcctcacc tctctgacca gttcgatctc tgaagactgt
1081 cttcccggaa ctgtaatcgc gctgtttagc gtacatgatg gtgattctgg agaaaatggt
1141 gagattgcat gctctattcc taggaatttg ccttttaaat tggagaagtc agttgataat
1201 tactatcacc tattaacaac tagggacctg gacagagaag agacttcaga ttataatatc
1261 actttaaccg tcatggacca tggaaccccg cccctctcta cagaaagcca catccccttg
1321 aaagtagcag acgttaatga caacccaccc aatttccctc aagcctccta ctccacctct
1381 gtcacagaaa acaatcccag aggtgtctct atcttctctg tgacagccca tgaccccgac
1441 agcggcgaca acgctcgagt cacctactcc ctggctgaag acacatttca gggggcgccc
1501 ttgtcctcct atgtatccat taactctgac accggtgtcc tgtatgctct gagatccttc
1561 gactatgagc agttgagaga cctacagttg tgggtgacag ccagcgacag tgggaaccct
1621 ccacttagca gcaacgtgtc gctgagcctg tttgtgctgg accagaacga caatacgcct
1681 gagatcctgt accccgccct ccccacagac ggttccacgg gcgtggagct ggcgcctcgc
1741 tccgcagaac ctggctacct ggtgaccaag gtggtagcgg tggacaaaga ttcaggccag
1801 aacgcctggc tgtcctaccg cctgcttaag gccagcgagc caggactctt tgcggttggg
1861 ctgcacacgg gcgaggtgcg cacagcgcga gccctgctgg acagagacgc gctcaagcag
1921 agcctcgtgg tggccgtcga agaccatggc cagccccctc tgtcagccac cttcacggtc
1981 accgttgccg tggccgacag gatccctgac atcctggctg acctaggcag tatcaagacc
2041 cccattgacc ctgaggatct ggacctcaca ctctatcttg tggtggcagt ggctgcagtc
2101 tcctgcgtct tcctggcctt cgtcatcgtg ctgctggtgc tcagactgag gcgctggcac
2161 aagtcacgcc tgcttcaggc tgaaggcagc aggttggcgg gtgtgcccgc ctcgcacttt
2221 gtgggcgtgg atggggttcg ggctttcctg cagacctatt cccacgaggt ctccctcacc
2281 gcggactcga ggaagagtca cctgatcttt ccccagccca actacgcaga cacgctcctt
2341 agtgaagaga gctgtgagaa aagcgagcct cttctgatgt ctgataaggt agatgcaaac
2401 aaagaagaac ggcgagttca gcaagccccg cccaacacgg actggcgttt ctctcaggcc
2461 cagagacccg gcaccagcgg ctcccaaaat ggcgatgaca ccggcacctg gcccaacaac
2521 cagtttgaca cagagatgct gcaagccatg atcttggcgt ccgccagtga agctgctgat
2581 gggagctcca ccctgggagg gggtgccggc accatgggat tgagcgcccg ctacggaccc
2641 cagttcaccc tgcagcacgt gcccgactac cgccagaatg tctacatccc aggcagcaat
2701 gccacactga ccaacgcagc tggcaagcgg gatggcaagg ccccagcagg tggcaatggc
2761 aacaagaaga agtcgggcaa gaaggagaag aagtaacatg gaggccaggc caagagccac
2821 agggcggcct ctccccaacc agcccagctt ctccttacct gcacccaggc ctcagagttt
2881 cagggctaac ccccagaata ctggtagggg ccaaggccat gctccccttg ggaaacagaa
2941 acaagtgccc agtcagcacc taccccttcc cccccagggg gttgaatatg caaaagcagt
3001 tccgctggga acccccatcc aatcaactgc tgtacccatg ggggtagtgg ggttactgta
3061 gacaccaaga accatttgcc acaccccgtt tagttacagc tgaactcctc catcttccaa
3121 atcaatcagg cccatccatc ccatgcctcc ctcctcccca ccccactcca acagttcctc
3181 tttcccgagt aaggtggttg gggtgttgaa gtaccaagta acctacaagc ctcctagttc
3241 tgaaaagttg gaagggcatc atgacctctt ggcctctcct ttgattctca atcttccccc
3301 aaagcatggt ttggtgccag ccccttcacc tccttccaga gcccaagatc aatgctcaag
3361 ttttggagga catgatcacc atccccatgg tactgatgct tgctggattt agggagggca
3421 ttttgctacc aagcctcttc ccaacgccct ggggaccagt cttctgtttt gtttttcatt
3481 gtttgacgtt tccactgcat gccttgactt cccccacctc ctcctcaaac aagagactcc
3541 actgcatgtt ccaagacagt atggggtggt aagataagga agggaagtgt gtggatgtgg
3601 atggtggggg catggacaaa gcttgacaca tcaagttatc aaggccttgg aggaggctct
3661 gtatgtcctc aggggactga caacatcctc cagattccag ccataaacca ataactaggc
3721 tggacccttc ccactacata atagggctca gcccaggcag ccagctttgg gctgagctaa
3781 caggaccaat ggattaaact ggcatttcag tccaaggaag ctcgaagcag gtttaggacc
3841 aggtcccctt gagaggtcag aggggcctct gtgggtgctg ggtactccag aggtgccact
3901 ggtggaaggg tcagcggagc cccagcagga agggtgggcc agccaggcca ttcttagtcc
3961 ctgggttggg gaggcaggga gctagggcag ggaccaaatg aacagaaagt ctcagcccag
4021 gatggggctt cttcaacagg gcccctgccc tcctgaagcc tcagtccttc accttgccag
4081 gtgccgtttc tcttccgtga aggccactgc ccaggtcccc agtgcgcccc ctagtggcca
4141 tagcctggtt aaagttcccc agtgcctcct tgtgcataga ccttcttctc ccaccccctt
4201 ctgcccctgg gtccccggcc atccagcggg gctgccagag aaccccagac ctgcccttac
4261 agtagtgtag cgccccctcc ctctttcggc tggtgtagaa tagccagtag tgtagtgcgg
4321 tgtgctttta cgtgatggcg ggtgggcagc gggcggcggg ctccgcgcag ccgtctgtcc
4381 ttgatctgcc cgcggcggcc cgtgttgtgt tttgtgctgt gtccacgcgc taaggcgacc
4441 ccctcccccg tactgacttc tcctataagc gcttctcttc gcatagtcac gtagctccca
4501 ccccaccctc ttcctgtgtc tcacgcaagt tttatactct aatatttata tggctttttt
4561 tcttcgacaa aaaaataata aaacgtttct tctgaaaagc tg
//