LOCUS AF152323 4605 bp mRNA linear HUM 22-JUL-1999
DEFINITION Homo sapiens protocadherin gamma A3 (PCDH-gamma-A3) mRNA, complete
cds.
ACCESSION AF152323
VERSION AF152323.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4605)
AUTHORS Wu,Q. and Maniatis,T.
TITLE A striking organization of a large family of human neural
cadherin-like cell adhesion genes
JOURNAL Cell 97 (6), 779-790 (1999)
PUBMED 10380929
REFERENCE 2 (bases 1 to 4605)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Human protocadherin genes
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4605)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-1999) Department of Molecular and Cellular
Biology, Harvard University, 7 Divinity Avenue, Cambridge, MA
02138, USA
FEATURES Location/Qualifiers
source 1..4605
/db_xref="H-InvDB:HIT000071749"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="5"
/map="5q31"
/tissue_type="brain"
gene 1..4605
/gene="PCDH-gamma-A3"
CDS 1..2799
/gene="PCDH-gamma-A3"
/function="cell-cell adhesion"
/note="member of the cadherin superfamily"
/codon_start=1
/product="protocadherin gamma A3"
/protein_id="AAD43717.1"
/translation="MTNCLSFRNGRGLALLCALLGTLCETGSSQIRYSVSEELDKGSF
VGNIANDLGLEPRELAERGVRIVSRGRTQLFSLNPQSGSLVTAERIDREELCAQIPLC
LVKINILVEDKLKIFEVEIEIKDINDNAPNFPTEELEIKIGELTVPGTRFPIKTAFDP
DVGINSLQNYKLSPNDYFSLAVNSVSEGAKYPELVLERALDREKKEIHQLVLVASDGG
DPVHSGNLHIQVIVLDANDNPPMFTQPEYRVSVWENVPVGTRLLTVNATDPDEGFNAQ
VSYILDKMPGKIAEIFHLNSVSGEVSILKSLDYEDAMFYEIKIEAQDGPGLLSRAKIL
VTVLDVNDNAPEITITSLTSSVPEEGTVGREIALIDVHDRDSGQNGQVEVFVLGNLPF
KLEKSIDQYYRLVTATSLDREQISEYNISLRASDGGSPPLSTETHITLHVIDINDNPP
TFPHLSYSAYIPENNPRGASIFSVTAQDPDSNNNARITYALTEDTLQGAPLSSFVSIN
SNTGVLYALRSFDYEQFRDLKLLVTASDSGNPPLSSNVSLNLFVLDQNDNAPEILYPA
LPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYRLLKASEPGLFSVGLHTG
EVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLIVAVADRIPDILADLGSLEPSA
KPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLRRWHKSRLLQASGGGLASTPGSHF
VGADGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKSEPLLITQDLL
EMKGDSNLLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASA
SEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGK
APAGGNGNKKKSGKKEKK"
BASE COUNT 1058 a 1360 c 1191 g 996 t
ORIGIN
1 atgaccaatt gcctgagttt ccgaaatggc agaggactgg ccctgctgtg cgcgctcctg
61 gggacgctgt gcgaaacagg atccagtcag atccgctact cggtgtctga ggagctagat
121 aaaggttcct tcgtgggcaa catcgctaac gacctggggc tagagccccg ggagctggcg
181 gagcgcggag tccgcatcgt ctccagaggt aggacgcagc ttttctctct gaatccgcaa
241 agcggcagct tggtcaccgc ggagaggata gaccgggagg agctctgcgc tcagatcccg
301 ctgtgtctgg taaaaattaa cattctggtt gaggataaat tgaaaatttt tgaagtagaa
361 atagaaatta aagatattaa tgataatgct cctaatttcc caacagagga attggaaata
421 aaaattggtg aactaacggt tcctggaacc cgatttccaa ttaaaactgc ttttgaccca
481 gatgtaggca ttaactccct gcagaactac aagcttagcc ccaatgacta cttctctctg
541 gctgtgaata gcgtctctga gggggccaag tatccagagc tggtgctgga gcgggccctg
601 gaccgtgaga aaaaagaaat tcaccagctt gtcctggttg cctctgatgg tggcgaccct
661 gtccactctg gcaacttgca catccaagtg atagtcctgg atgcaaatga caacccacca
721 atgtttactc agcctgagta ccgtgtgagt gtttgggaga acgtgcctgt gggtacccgg
781 ctgctcacgg tgaatgccac tgaccctgac gagggattca atgctcaagt gtcttatatt
841 ctagataaaa tgcctgggaa aatcgctgag attttccatc ttaactcagt gagtggagaa
901 gtatcaatat taaaaagtct agattatgag gatgccatgt tctatgaaat taaaattgaa
961 gcacaggatg gaccaggtct tctttcaaga gccaagattc tagtcacggt tctggatgtg
1021 aatgacaatg ctccagaaat tacaatcacg tctctcacaa gctcagtccc agaagagggc
1081 accgttggaa gagaaattgc tcttatcgac gtgcatgacc gagattctgg gcagaatggg
1141 caggttgaag tttttgtcct gggaaatctg ccatttaagt tagaaaaatc aatagatcaa
1201 tattaccgct tagtgacggc cacatccctg gaccgcgaac aaatatcaga atataacatt
1261 agtctgagag cctcagatgg gggaagcccg ccactgtcca cagaaactca catcaccctg
1321 catgtgattg acatcaatga caacccaccc accttccctc atttatccta ctccgcctac
1381 attccagaaa acaaccccag aggagcctcc atcttctcag tgacagccca ggacccagat
1441 agcaacaaca acgcccgcat cacttatgca ttgaccgagg acactctcca gggggcgccc
1501 ctgtcctcct tcgtctctat caactccaac actggcgtcc tatacgcgct gagatccttc
1561 gactacgagc aatttagaga cttaaagcta ctggtgacag ccagcgacag cgggaaccct
1621 ccactcagca gcaacgtgtc gctgaacctg ttcgtgctgg accagaacga caacgcgccc
1681 gagatcctgt accccgccct ccccacagac ggttccactg gcgtggagct ggcgcctcgc
1741 tccgcagagc ccggctacct ggtgaccaag gtggtggcgg tggacagaga ctcgggccag
1801 aacgcctggc tgtcctaccg cctgctcaag gccagcgagc cgggactctt ctcggtgggt
1861 ctgcacacgg gcgaggtgcg cacggcgcga gccctgctgg acagagacgc gctcaagcag
1921 agcctcgtgg tggccatcca ggaccacggc cagccccctc tctccgccac tgtcacgctc
1981 atcgtggccg tggccgacag gatccccgac atcctggccg acctgggcag cctcgagccc
2041 tccgccaaac ccaacgattc ggacctcact ctgtacctgg tggtggcggt ggccgcggtc
2101 tcctgcgtct tcctggcctt cgtcatcgtg ctgctggcgc tcaggctgcg gcgctggcac
2161 aagtcacgcc tgctgcaggc ttcgggaggc ggcttggcga gtacgcccgg ctcgcacttt
2221 gtgggcgcgg acggggttcg ggctttcctg cagacctatt cccacgaggt ctccctcact
2281 gcggactcgc ggaagagcca cctgattttc ccccagccca actatgcgga cacgctcatc
2341 agccaggaga gctgtgagaa aagcgagcct cttctgataa ctcaggattt acttgaaatg
2401 aaaggagatt ccaacctact tcagcaagcc ccgcccaaca cggactggcg tttctctcag
2461 gcccagagac ccggcaccag cggctcccaa aatggcgatg acaccggcac ctggcccaac
2521 aaccagtttg acacagagat gctgcaagcc atgatcttgg cgtccgccag tgaagctgct
2581 gatgggagct ccaccctggg agggggtgcc ggcaccatgg gattgagcgc ccgctacgga
2641 ccccagttca ccctgcagca cgtgcccgac taccgccaga atgtctacat cccaggcagc
2701 aatgccacac tgaccaacgc agctggcaag cgggatggca aggccccagc aggtggcaat
2761 ggcaacaaga agaagtcggg caagaaggag aagaagtaac atggaggcca ggccaagagc
2821 cacagggcgg cctctcccca accagcccag cttctcctta cctgcaccca ggcctcagag
2881 tttcagggct aacccccaga atactggtag gggccaaggc catgctcccc ttgggaaaca
2941 gaaacaagtg cccagtcagc acctacccct tcccccccag ggggttgaat atgcaaaagc
3001 agttccgctg ggaaccccca tccaatcaac tgctgtaccc atgggggtag tggggttact
3061 gtagacacca agaaccattt gccacacccc gtttagttac agctgaactc ctccatcttc
3121 caaatcaatc aggcccatcc atcccatgcc tccctcctcc ccaccccact ccaacagttc
3181 ctctttcccg agtaaggtgg ttggggtgtt gaagtaccaa gtaacctaca agcctcctag
3241 ttctgaaaag ttggaagggc atcatgacct cttggcctct cctttgattc tcaatcttcc
3301 cccaaagcat ggtttggtgc cagccccttc acctccttcc agagcccaag atcaatgctc
3361 aagttttgga ggacatgatc accatcccca tggtactgat gcttgctgga tttagggagg
3421 gcattttgct accaagcctc ttcccaacgc cctggggacc agtcttctgt tttgtttttc
3481 attgtttgac gtttccactg catgccttga cttcccccac ctcctcctca aacaagagac
3541 tccactgcat gttccaagac agtatggggt ggtaagataa ggaagggaag tgtgtggatg
3601 tggatggtgg gggcatggac aaagcttgac acatcaagtt atcaaggcct tggaggaggc
3661 tctgtatgtc ctcaggggac tgacaacatc ctccagattc cagccataaa ccaataacta
3721 ggctggaccc ttcccactac ataatagggc tcagcccagg cagccagctt tgggctgagc
3781 taacaggacc aatggattaa actggcattt cagtccaagg aagctcgaag caggtttagg
3841 accaggtccc cttgagaggt cagaggggcc tctgtgggtg ctgggtactc cagaggtgcc
3901 actggtggaa gggtcagcgg agccccagca ggaagggtgg gccagccagg ccattcttag
3961 tccctgggtt ggggaggcag ggagctaggg cagggaccaa atgaacagaa agtctcagcc
4021 caggatgggg cttcttcaac agggcccctg ccctcctgaa gcctcagtcc ttcaccttgc
4081 caggtgccgt ttctcttccg tgaaggccac tgcccaggtc cccagtgcgc cccctagtgg
4141 ccatagcctg gttaaagttc cccagtgcct ccttgtgcat agaccttctt ctcccacccc
4201 cttctgcccc tgggtccccg gccatccagc ggggctgcca gagaacccca gacctgccct
4261 tacagtagtg tagcgccccc tccctctttc ggctggtgta gaatagccag tagtgtagtg
4321 cggtgtgctt ttacgtgatg gcgggtgggc agcgggcggc gggctccgcg cagccgtctg
4381 tccttgatct gcccgcggcg gcccgtgttg tgttttgtgc tgtgtccacg cgctaaggcg
4441 accccctccc ccgtactgac ttctcctata agcgcttctc ttcgcatagt cacgtagctc
4501 ccaccccacc ctcttcctgt gtctcacgca agttttatac tctaatattt atatggcttt
4561 ttttcttcga caaaaaaata ataaaacgtt tcttctgaaa agctg
//