LOCUS AF152322 4605 bp mRNA linear HUM 22-JUL-1999 DEFINITION Homo sapiens protocadherin gamma A2 (PCDH-gamma-A2) mRNA, complete cds. ACCESSION AF152322 VERSION AF152322.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4605) AUTHORS Wu,Q. and Maniatis,T. TITLE A striking organization of a large family of human neural cadherin-like cell adhesion genes JOURNAL Cell 97 (6), 779-790 (1999) PUBMED 10380929 REFERENCE 2 (bases 1 to 4605) AUTHORS Wu,Q. and Maniatis,T. TITLE Human protocadherin genes JOURNAL Unpublished REFERENCE 3 (bases 1 to 4605) AUTHORS Wu,Q. and Maniatis,T. TITLE Direct Submission JOURNAL Submitted (17-MAY-1999) Department of Molecular and Cellular Biology, Harvard University, 7 Divinity Avenue, Cambridge, MA 02138, USA FEATURES Location/Qualifiers source 1..4605 /db_xref="H-InvDB:HIT000071748" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="5" /map="5q31" /tissue_type="brain" gene 1..4605 /gene="PCDH-gamma-A2" CDS 1..2799 /gene="PCDH-gamma-A2" /function="cell-cell adhesion" /note="member of the cadherin superfamily" /codon_start=1 /product="protocadherin gamma A2" /protein_id="AAD43716.1" /translation="MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSF VGNIAKDLGLEPLALAEQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSAPC LLNFNILLEDKLTIYSVEVEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDA DVGENALQKYALNPNDHFSLDVRRGADGNKYPELVLERSLDREEEAVHHLVLVASDGG DPVLSGTSRICVKVLDANDNAPVFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQ VVYFLEKSPGETSEVFELKSTSGELTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVI VTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPF KLEKSVDNYYRLVTTRALDREQFSFYNITLTAKDGGNPSLSTDAHILLQVADINDNAP AFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTYSFAEDTVQGAPLSSYISIN SDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLSLFVLDQNDNAPEILYPA FPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLKASEPGLFSVGLHTG EVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSA IPNDSDLTLYLVVAVAAVSCVFLAFVIVLLAHRLRRWHKSRLLQASGGSLTGMQSSHF VGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKDFLSAPQSLL EEEREETFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASA SEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGK APAGGNGNKKKSGKKEKK" BASE COUNT 1032 a 1374 c 1202 g 997 t ORIGIN 1 atggcggctc tgcaaaagtt gccacactgc agaaagctgg tcctgctgtg cttccttttg 61 gcgaccctgt gggaggccag ggccgggcag attcgctatt ctgtgcggga agagatcgac 121 agaggctcct tcgtaggcaa catcgccaag gacttgggtt tggagcccct ggcactggca 181 gagcagggag tccgcatcgt ctccagaggt aggtcccagc tctttgctct gaacccgcga 241 agcggcagct tggtcactgc gaacaggata gaccgggagg agctctgcgc tcagagcgca 301 ccctgtctgt tgaattttaa cattctgctg gaggataaat tgactattta ttcagtagag 361 gtggaaataa cagatattaa cgataatgcc cctcgctttg gagtagagga actggagcta 421 aaaatcagtg aaaccactac gccaggattc cggattcctc ttaagaatgc gcatgatgca 481 gacgtaggtg agaacgccct tcagaagtac gcactcaacc caaatgacca cttctccctg 541 gacgtgcgaa ggggagctga tgggaacaag tacccagaac tggtgctgga gcgctctctg 601 gaccgcgagg aagaggctgt tcaccacctc gttctcgtgg cttctgatgg gggtgaccca 661 gtgctatctg gcacctcccg catctgcgtg aaggtcctgg atgcgaacga caatgcgcct 721 gtttttacac agcccgagta ccgcataagc attccggaga atacgctcgt gggcacccgg 781 atactcacgg tgaccgccac tgacgcagat gagggctact acgctcaagt ggtatatttt 841 ctagagaaaa gccctggaga aacctcagag gtatttgagc ttaagtcaac atctggagaa 901 ctgacaatca taaaagatct agattatgag gatgctacat tccatgaaat tgatattgaa 961 gctcaggatg gtccgggcct tctaaccaga gcgaaggtta tcgtcacggt tctggatgtg 1021 aatgacaatg ccccagaatt ttacatgaca tctgctacta gctcagtttc tgaagactct 1081 cttccaggaa ccataattgg gctttttaat gtacatgata gagactctgg gcagaacgca 1141 ttcaccacct gttcactccc cgaggatctt ccttttaagt tagaaaagtc agtagacaat 1201 tactaccgac tggttacaac cagagccctt gacagggaac agttttcctt ttacaacatc 1261 actctaaccg ctaaagatgg agggaacccc tccctgtcca cggatgctca cattttgctc 1321 caggtggcag acatcaacga caacgcaccc gccttctccc gcacatccta ctccacctac 1381 attcccgaaa acaaccccag aggagcctct gtcttctcag tgacggccca tgaccccgac 1441 agcaacgaca atgctcatgt aacttactct ttcgcggagg acactgttca gggggcaccc 1501 ttatcctctt acatctctat caactccgac actggagtac tctatgcact gcgctccttt 1561 gattatgagc agttgcgaga cttgcaagtg tgggtgatag cgcgggacag cgggaaccct 1621 ccactcagta gcaatgtatc attaagcctg ttcgtgctgg accagaacga caacgcgccc 1681 gagatcctgt accctgcctt ccccacagac ggttccactg gcgtggagct ggcgccccgc 1741 tccgcagagc ccggctacct ggtgaccaag gtggtggcgg tggacagaga ctcgggccag 1801 aacgcctggc tgtcttacca cctgctcaag gccagcgagc cgggactctt ctcggtgggt 1861 ctgcacacgg gcgaggtgcg cacggcgcga gccctgctgg acagagacgc gctcaagcag 1921 agcctcgtgg tggccatcca ggaccacggc cagccccctc tctccgccac tgtcacgctc 1981 accgtggccg tggccgacag gatccccgac atcctggccg acctgggcag cctcgagccc 2041 tccgccatac ccaacgattc ggacctcact ctgtacctgg tggtggcggt ggccgcggtc 2101 tcctgcgtct tcctggcctt cgtcatcgtg ttgctggcgc acaggctgcg gcgctggcac 2161 aagtcacgcc tgctgcaggc ttcaggaggc agcttgacag gcatgcagag ctcgcacttt 2221 gtgggcgtgg acggggttcg ggctttcctg cagacctatt cccacgaggt ctccctcact 2281 gcggactcgc ggaagagcca cctgattttc ccccagccca actatgcgga cacgctcatc 2341 agccaggaga gctgtgagaa aaaggatttt ttatcagcgc ctcaatctct actcgaagaa 2401 gaaagagaag aaacgttttc tcagcaagcc ccgcccaaca cggactggcg tttctctcag 2461 gcccagagac ccggcaccag cggctcccaa aatggcgatg acaccggcac ctggcccaac 2521 aaccagtttg acacagagat gctgcaagcc atgatcttgg cgtccgccag tgaagctgct 2581 gatgggagct ccaccctggg agggggtgcc ggcaccatgg gattgagcgc ccgctacgga 2641 ccccagttca ccctgcagca cgtgcccgac taccgccaga atgtctacat cccaggcagc 2701 aatgccacac tgaccaacgc agctggcaag cgggatggca aggccccagc aggtggcaat 2761 ggcaacaaga agaagtcggg caagaaggag aagaagtaac atggaggcca ggccaagagc 2821 cacagggcgg cctctcccca accagcccag cttctcctta cctgcaccca ggcctcagag 2881 tttcagggct aacccccaga atactggtag gggccaaggc catgctcccc ttgggaaaca 2941 gaaacaagtg cccagtcagc acctacccct tcccccccag ggggttgaat atgcaaaagc 3001 agttccgctg ggaaccccca tccaatcaac tgctgtaccc atgggggtag tggggttact 3061 gtagacacca agaaccattt gccacacccc gtttagttac agctgaactc ctccatcttc 3121 caaatcaatc aggcccatcc atcccatgcc tccctcctcc ccaccccact ccaacagttc 3181 ctctttcccg agtaaggtgg ttggggtgtt gaagtaccaa gtaacctaca agcctcctag 3241 ttctgaaaag ttggaagggc atcatgacct cttggcctct cctttgattc tcaatcttcc 3301 cccaaagcat ggtttggtgc cagccccttc acctccttcc agagcccaag atcaatgctc 3361 aagttttgga ggacatgatc accatcccca tggtactgat gcttgctgga tttagggagg 3421 gcattttgct accaagcctc ttcccaacgc cctggggacc agtcttctgt tttgtttttc 3481 attgtttgac gtttccactg catgccttga cttcccccac ctcctcctca aacaagagac 3541 tccactgcat gttccaagac agtatggggt ggtaagataa ggaagggaag tgtgtggatg 3601 tggatggtgg gggcatggac aaagcttgac acatcaagtt atcaaggcct tggaggaggc 3661 tctgtatgtc ctcaggggac tgacaacatc ctccagattc cagccataaa ccaataacta 3721 ggctggaccc ttcccactac ataatagggc tcagcccagg cagccagctt tgggctgagc 3781 taacaggacc aatggattaa actggcattt cagtccaagg aagctcgaag caggtttagg 3841 accaggtccc cttgagaggt cagaggggcc tctgtgggtg ctgggtactc cagaggtgcc 3901 actggtggaa gggtcagcgg agccccagca ggaagggtgg gccagccagg ccattcttag 3961 tccctgggtt ggggaggcag ggagctaggg cagggaccaa atgaacagaa agtctcagcc 4021 caggatgggg cttcttcaac agggcccctg ccctcctgaa gcctcagtcc ttcaccttgc 4081 caggtgccgt ttctcttccg tgaaggccac tgcccaggtc cccagtgcgc cccctagtgg 4141 ccatagcctg gttaaagttc cccagtgcct ccttgtgcat agaccttctt ctcccacccc 4201 cttctgcccc tgggtccccg gccatccagc ggggctgcca gagaacccca gacctgccct 4261 tacagtagtg tagcgccccc tccctctttc ggctggtgta gaatagccag tagtgtagtg 4321 cggtgtgctt ttacgtgatg gcgggtgggc agcgggcggc gggctccgcg cagccgtctg 4381 tccttgatct gcccgcggcg gcccgtgttg tgttttgtgc tgtgtccacg cgctaaggcg 4441 accccctccc ccgtactgac ttctcctata agcgcttctc ttcgcatagt cacgtagctc 4501 ccaccccacc ctcttcctgt gtctcacgca agttttatac tctaatattt atatggcttt 4561 ttttcttcga caaaaaaata ataaaacgtt tcttctgaaa agctg //