LOCUS AF152320 4614 bp mRNA linear HUM 22-JUL-1999
DEFINITION Homo sapiens protocadherin gamma A11 (PCDH-gamma-A11) mRNA,
complete cds.
ACCESSION AF152320
VERSION AF152320.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4614)
AUTHORS Wu,Q. and Maniatis,T.
TITLE A striking organization of a large family of human neural
cadherin-like cell adhesion genes
JOURNAL Cell 97 (6), 779-790 (1999)
PUBMED 10380929
REFERENCE 2 (bases 1 to 4614)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Human protocadherin genes
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4614)
AUTHORS Wu,Q. and Maniatis,T.
TITLE Direct Submission
JOURNAL Submitted (17-MAY-1999) Department of Molecular and Cellular
Biology, Harvard University, 7 Divinity Avenue, Cambridge, MA
02138, USA
FEATURES Location/Qualifiers
source 1..4614
/db_xref="H-InvDB:HIT000071746"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="5"
/map="5q31"
/tissue_type="brain"
gene 1..4614
/gene="PCDH-gamma-A11"
CDS 1..2808
/gene="PCDH-gamma-A11"
/function="cell-cell adhesion"
/note="member of the cadherin superfamily"
/codon_start=1
/product="protocadherin gamma A11"
/protein_id="AAD43714.1"
/translation="MANRLQRGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGS
FVGNISKDLGLEPRELAKRGVRIVSRGKTQLFAVNPRSGSLITAGRIDREELCETVSS
CFLNMELLVEDTLKIYGVEVEIIDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARD
PDVGVNSLQSYQLSPNNYFSLQLRGRTDGAKNPELVLEGSLDREKEAAHLLLLTALDG
GDPIRKGAVPIRVVVLDVNDHIPMFTQSVYRVSVPENISSGTRVLMVNATDPDEGING
EVMYSFRNMESKASEIFQLDSQTGEVQVRGSLDFEKYRFYEMEIQGQDGGGLFTTTTM
LITVVDVNDNAPEITITSSINSILENSPPGTVIALLNVQDQDSGENGQVSCFIPNHLP
FKLEKTYGNYYKLITSRVLDRELVQSYNITLTATDQGSPPLSAETHVWLNVADDNDNP
PVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNALVTYSLTDDTVQGVPLSSYVSI
NSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSNVSLSLFVLDQNDNAPEILYP
ALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFAVGEHT
GEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLADLGSLESL
ANSETSDLSLYLVVAVAAVSCIFLVFVIVLLALRLWRWHKSRLLQASEGGLAGMPTSH
FVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQESCEKSEPLLIAEDS
AIILGKCDPTSNQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMIL
ASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKR
DGKAPAGGNGNKKKSGKKEKK"
BASE COUNT 1047 a 1326 c 1222 g 1019 t
ORIGIN
1 atggcgaatc ggctacagcg cggggaccgc agtcggctgc tgctgctgct gtgcattttc
61 ctggggacgc tgcgggggtt ccgggccagg cagatccgat attcggtgcc agaagagacc
121 gaaaagggct ccttcgtggg caatatctcc aaggacctgg ggctggagcc ccgggagctg
181 gcgaagcgcg gagtccgcat cgtctccaga gggaagacac agcttttcgc tgtgaatccg
241 cgaagcggca gcttgatcac ggcaggcagg atagaccggg aggagctctg tgagacggtg
301 tcctcctgtt ttttaaatat ggaacttctc gtggaagaca ccttgaagat ttacggagtg
361 gaggtggaaa taatagatat taatgataac gcccccagct tccaggagga cgaagtggag
421 ataaaagtca gtgagcacgc aattcctggg gcgcgatttg ctcttcctaa tgctagggat
481 ccagatgtgg gcgtgaactc cctccagagc taccagctca gccctaataa ttacttttcc
541 ttgcaactgc ggggcagaac ggatggggcc aagaatccag agctagtact ggagggaagc
601 ctggaccgag agaaagaggc tgctcacctg ctcctcctca cagctttaga tggaggcgat
661 cccatccgaa agggcgcagt tcccattcgt gtggtggtcc tcgatgtaaa tgatcacatc
721 ccaatgttta cacagtccgt atatcgcgtg agtgttccag aaaacatcag ctccggaact
781 cgggtgctga tggttaatgc aacggatcca gacgagggaa tcaacgggga agtaatgtat
841 tcatttcgga acatggaaag caaggcttct gaaatattcc aattggattc acaaactgga
901 gaagttcaag tacgggggtc tctggatttt gaaaaatata gattctatga gatggaaatt
961 caaggccaag atggtggagg tctctttacc accacgacga tgttgatcac tgttgtggat
1021 gtgaatgata acgctccaga aataactatc acctcttcta ttaattcaat tctggaaaac
1081 tctcctccag gtacagtgat tgctcttcta aatgtgcaag atcaagattc tggagaaaat
1141 ggtcaagtct cctgttttat tcctaaccac ctgcctttta aattagaaaa gacttatgga
1201 aattattaca aattgataac aagcagagtg ctggacaggg agttggtcca gagctacaat
1261 ataacgttga cagccacaga ccagggaagc ccgcctttgt ctgcagaaac tcatgtctgg
1321 ctgaatgtgg cagatgacaa cgataaccct cccgtttttc ctcactcctc ttactctgcc
1381 tacattcccg aaaacaaccc caggggtgcc tccatcttct cagtgaccgc cctcgacccg
1441 gacagcaaac agaatgccct ggtcacttac tctctgacgg atgacactgt ccagggggtg
1501 cctctgtcct cctatgtctc tattaactcc aacactggtg ttctctatgc cctacaatcc
1561 ttcgactatg agcagtttcg agacttagaa ctgagagtga tagcacgtga cagcggggac
1621 ccgcccctca gcagcaacgt gtcgctgagc ctgttcgtgc tggaccagaa cgacaatgcg
1681 cccgagatcc tgtaccctgc cctccccaca gacggctcca ctggcgtgga gctggcgccc
1741 cgctctgcgg aacctggcta cctggtgacc aaggtggttg cggtggacaa agattcaggc
1801 cagaacgcct ggctgtccta tcgcctgctt aaggccagcg agccgggact cttcgcggtg
1861 ggggagcaca cgggcgaggt gcgtacagcg cgggcactgc tggacagaga cgcgctcaag
1921 cagagcctcg tggtggccgt ccaggaccac ggccagcccc ctctctcggc caccgtcacg
1981 ctcaccgtgg ctgtggccga cagcatcccc gaagtcctgg cggacctcgg cagcctcgag
2041 tctctggcta actctgaaac ctcagacctc tcgctgtact tggtggtggc ggtggccgca
2101 gtctcctgca tcttcctggt ctttgtcatc gtgctgctgg cactcaggct gtggcgctgg
2161 cataagtcac gcctgctgca ggcttctgaa ggcgggttgg caggtatgcc cacgtcacat
2221 tttgtaggcg tggacggggt acaggctttc ctgcaaacct attcccacga ggtctctctc
2281 attgcggact cgcagaagag tcacctgatt ttcccccagc ccaactatgg ggacacgctc
2341 atcagccagg agagctgtga gaaaagcgag ccactcttga tagctgaaga ctcagctatc
2401 attttaggca aatgtgaccc gacaagtaat cagcaagccc cgcccaacac ggactggcgt
2461 ttctctcagg cccagagacc cggcaccagc ggctcccaaa atggcgatga caccggcacc
2521 tggcccaaca accagtttga cacagagatg ctgcaagcca tgatcttggc gtccgccagt
2581 gaagctgctg atgggagctc caccctggga gggggtgccg gcaccatggg attgagcgcc
2641 cgctacggac cccagttcac cctgcagcac gtgcccgact accgccagaa tgtctacatc
2701 ccaggcagca atgccacact gaccaacgca gctggcaagc gggatggcaa ggccccagca
2761 ggtggcaatg gcaacaagaa gaagtcgggc aagaaggaga agaagtaaca tggaggccag
2821 gccaagagcc acagggcggc ctctccccaa ccagcccagc ttctccttac ctgcacccag
2881 gcctcagagt ttcagggcta acccccagaa tactggtagg ggccaaggcc atgctcccct
2941 tgggaaacag aaacaagtgc ccagtcagca cctacccctt cccccccagg gggttgaata
3001 tgcaaaagca gttccgctgg gaacccccat ccaatcaact gctgtaccca tgggggtagt
3061 ggggttactg tagacaccaa gaaccatttg ccacaccccg tttagttaca gctgaactcc
3121 tccatcttcc aaatcaatca ggcccatcca tcccatgcct ccctcctccc caccccactc
3181 caacagttcc tctttcccga gtaaggtggt tggggtgttg aagtaccaag taacctacaa
3241 gcctcctagt tctgaaaagt tggaagggca tcatgacctc ttggcctctc ctttgattct
3301 caatcttccc ccaaagcatg gtttggtgcc agccccttca cctccttcca gagcccaaga
3361 tcaatgctca agttttggag gacatgatca ccatccccat ggtactgatg cttgctggat
3421 ttagggaggg cattttgcta ccaagcctct tcccaacgcc ctggggacca gtcttctgtt
3481 ttgtttttca ttgtttgacg tttccactgc atgccttgac ttcccccacc tcctcctcaa
3541 acaagagact ccactgcatg ttccaagaca gtatggggtg gtaagataag gaagggaagt
3601 gtgtggatgt ggatggtggg ggcatggaca aagcttgaca catcaagtta tcaaggcctt
3661 ggaggaggct ctgtatgtcc tcaggggact gacaacatcc tccagattcc agccataaac
3721 caataactag gctggaccct tcccactaca taatagggct cagcccaggc agccagcttt
3781 gggctgagct aacaggacca atggattaaa ctggcatttc agtccaagga agctcgaagc
3841 aggtttagga ccaggtcccc ttgagaggtc agaggggcct ctgtgggtgc tgggtactcc
3901 agaggtgcca ctggtggaag ggtcagcgga gccccagcag gaagggtggg ccagccaggc
3961 cattcttagt ccctgggttg gggaggcagg gagctagggc agggaccaaa tgaacagaaa
4021 gtctcagccc aggatggggc ttcttcaaca gggcccctgc cctcctgaag cctcagtcct
4081 tcaccttgcc aggtgccgtt tctcttccgt gaaggccact gcccaggtcc ccagtgcgcc
4141 ccctagtggc catagcctgg ttaaagttcc ccagtgcctc cttgtgcata gaccttcttc
4201 tcccaccccc ttctgcccct gggtccccgg ccatccagcg gggctgccag agaaccccag
4261 acctgccctt acagtagtgt agcgccccct ccctctttcg gctggtgtag aatagccagt
4321 agtgtagtgc ggtgtgcttt tacgtgatgg cgggtgggca gcgggcggcg ggctccgcgc
4381 agccgtctgt ccttgatctg cccgcggcgg cccgtgttgt gttttgtgct gtgtccacgc
4441 gctaaggcga ccccctcccc cgtactgact tctcctataa gcgcttctct tcgcatagtc
4501 acgtagctcc caccccaccc tcttcctgtg tctcacgcaa gttttatact ctaatattta
4561 tatggctttt tttcttcgac aaaaaaataa taaaacgttt cttctgaaaa gctg
//