LOCUS AF141346 4055 bp DNA linear HUM 16-OCT-2001
DEFINITION Homo sapiens growth arrest specific transcript 5 gene, exons 1
through 12 and alternatively spliced mRNA sequences.
ACCESSION AF141346
VERSION AF141346.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4055)
AUTHORS Smith,C.M. and Steitz,J.A.
TITLE Classification of gas5 as a multi-small-nucleolar-RNA (snoRNA) host
gene and a member of the 5'-terminal oligopyrimidine gene family
reveals common features of snoRNA host genes
JOURNAL Mol. Cell. Biol. 18 (12), 6897-6909 (1998)
PUBMED 9819378
REFERENCE 2 (bases 1 to 4055)
AUTHORS Smith,C. and Steitz,J.A.
TITLE Direct Submission
JOURNAL Submitted (07-APR-1999) Mol. Biophys. Biochem, Yale University, 295
Congress Ave, New Haven, CT 06536, USA
FEATURES Location/Qualifiers
source 1..4055
/organism="Homo sapiens"
/mol_type="genomic DNA"
/db_xref="taxon:9606"
mRNA join(1..30,947..999,1194..1229,1430..1460,1782..1811,
2093..2130,2438..2514,2703..2756,3280..3309,3476..3499,
3679..3726,3909..4055)
/product="growth arrest specific transcript 5"
/note="alternatively spliced; gas5"
mRNA join(1..30,947..999,1194..1229,1430..1460,1782..1811,
2093..2130,2438..2475,2703..2756,3280..3309,3476..3499,
3679..3726,3909..4055)
/product="growth arrest specific transcript 5"
/note="alternatively spliced; gas5"
exon 1..30
/number=1
ncRNA 245..316
/ncRNA_class="snoRNA"
/note="U74"
exon 947..999
/number=2
ncRNA 1052..1111
/ncRNA_class="snoRNA"
/note="U75"
exon 1194..1229
/number=3
ncRNA 1275..1355
/ncRNA_class="snoRNA"
/note="U76"
exon 1430..1460
/number=4
ncRNA 1617..1677
/ncRNA_class="snoRNA"
/note="U77"
exon 1782..1811
/number=5
ncRNA 1961..2021
/ncRNA_class="snoRNA"
/note="U44"
exon 2093..2130
/number=6
ncRNA 2301..2354
/ncRNA_class="snoRNA"
/note="U78"
exon 2438..2514
/number=7
exon 2438..2475
/note="alternative exon 7"
/number=7
ncRNA 2555..2635
/ncRNA_class="snoRNA"
/note="U79"
exon 2703..2756
/number=8
ncRNA 3081..3151
/ncRNA_class="snoRNA"
/note="U80"
exon 3280..3309
/number=9
exon 3476..3499
/number=10
ncRNA 3549..3613
/ncRNA_class="snoRNA"
/note="U47"
exon 3679..3726
/number=11
ncRNA 3766..3808
/ncRNA_class="snoRNA"
/note="U81"
exon 3909..4055
/number=12
BASE COUNT 1100 a 757 c 929 g 1259 t
ORIGIN
1 cttttcgagg taggagtcga ctcctgtgag gtatgtttta tctttgcgaa tgttgcgggt
61 tttggggcgc tccagccttt gtctgctaag gtcaccctga attgactggg acttctaagc
121 cagtcgcgcg cctttgcagg gcctacaagt tgaggatggt gggggattgc acatatggtg
181 catgcgtgac ctaagctgcg actatgttag agtagaactg cggagaagcc tcggctctcg
241 tgccctgcct ctgatgaagc ctgtgttggt agggacatct gacagtaatg atgaatgcca
301 accgctctga tggtggcaca tgccgagtca cccgagtaag ctattgttaa gggccgtgac
361 ccgagcctcc atcagccgtc cgctctcatg aaaggctgtc ggtggtagtc cacgtgctta
421 agtgcctgca ttccgcagtg tcaccaatat ttccattagt gtttcttttt tcttttttga
481 gacngagcct cgttntgtca cccaggctgg aatgcagtgg ctcgacatcg gttaatggca
541 acctcngcgt cccgagttaa gcagttntgc ctcagcctcc caagtaactg ggactacagg
601 cgcgcgccac catgntaggc ttttatattt ttagtagaga cggggtttca ccatgttggc
661 gagactggtc ttgaactcct gacctcaggt gatccaccag ccgtggtccc ccaacatact
721 gggattacaa gccgtgagcc accgcgcccg gccgccatcg gtggttctta actgcgggtg
781 cagtgcttct ttgtaacatt aagtgtatcc tttacctgtc gctagataat gaatggtatg
841 ttacctgcat cattggttta aaaagacgaa ccgttttttt aaagaacact ctttaaaaaa
901 aagaaccgtg gaacaatgaa ttaaaatctg tacctgatct ctttaggtat ggtgctgggt
961 gcagatgcag tgtggctctg gatagcacct tatggacagg taagaattgg ggaaagtatg
1021 gtgggaagaa tgaaatctaa gaggtggtct cagcctgtga tgctttaaga gtagtggaca
1081 gaagggattt ctgaaattct attctgaggc tttaatgtta acagcattta tatttaacgt
1141 gactgctgtg aggttcattc tcactgtttt gcttgcatct ttttgttttc tagttgtgtc
1201 cccaaggaag gatgagaata nctactgaag taagttgaaa attccctctc aaaaaggttt
1261 aaagccattg gatgtgccac aatgatgaca gtttatttgc tactcttgag tgctagaatg
1321 atgaggatct taaccaccat tatcttaact gaggcaccaa aatggtgagt tggggaacat
1381 agagagtaca cctaattcac atgaatttgt ntcttcccag gtcctaaaga gcaagcctaa
1441 ctcaagccat tggcacacag gtgagacact tctattttgt acttctcact tttaagggat
1501 tagaaaatag ccaaagcaat gatgattatc tatgttagtg cttctctccc ctcttttcaa
1561 atgagaattt tgctctcata ttgatactaa gtttaatact gaagaaaatg tgaaaacaga
1621 tactatgatg gttgcatagt tcagcagatt taatcatgaa gagatgtact atctgtctga
1681 tgtatctggg gtagttgtgg tttgctgtta atggttaagc agtgtaccac caatctacca
1741 ttaaaatatt ttttgctgac aattttgtat taaaattaca ggcattagac agaaagctgg
1801 aagttgaaat ggtaagtgaa actgtatcca agtaagcagg taactgggca aacttcctac
1861 ggcacaaatg gctttttagt tacctcctag tgctgaatgc attaaataaa tggcggattc
1921 ttgtcttgtt atgattaata agaaagtttg taaatgcagc ctggatgatg atagcaaatg
1981 ctgactgaac atgaaggtct taattagctc taactgacta aaggcatttg ttagctttgg
2041 cagggggtga acactcatct gtggctattc taagaccact cttatttctt aggtggagtc
2101 caacttgcct ggaccagctt aatggttctg gtaagtatta atgaaaacag tagatagact
2161 taatgaaaat gctgatggtg atatgcttac tgctgagcta atggcttaag gcttggctga
2221 tgaatactga ctgtattttc cttgagcatg tctggaacag tgtttatgtg ttttccttga
2281 gcatgtttgg aacggggttt gtgtaatgat gttgatcaaa tgtctgacct gaaatgagca
2341 tgtagacaaa ggtacactga agaacctgtg acagacaact ttgaaaagag tttaatgatg
2401 tttagcattt taatggaagt cctcatttgt attccagctc ctggtaacgt ttttatccat
2461 ggatgacttg cttgggtaag gacatgaaga cagttcctgt catacctttt aaaggtacat
2521 gttttattga tgttaacgtt aattgattga gctactgtta gtgatgattt taaaattaaa
2581 gcagatggga atccctctga gaaagaaaat ggagattaat cttaaactga aacagtagtt
2641 gggaaatctt ttagaaatcc acctattact acctattggt aaaggagatt aaatttctac
2701 aggtatggag agtcggcttg actacactgt gtggagcaag ttttaaagaa gcaaaggtat
2761 agcagttcca agtatttttt ttttttttta gacaagantc tagctcttgc ccagaatgga
2821 gtgcagcggc actatcagtt cgctgcaacc tctgcctccc aggttcaagg aattctcctg
2881 cctcagcctc ttgagtagct gggattacag gcatgtgaca ccatgcctgg ctaattttgt
2941 acagctatgt tgtccaggct ggtctcgaac tcttgacctc aagtgacact gcccgcactg
3001 acctcccaaa gtgctgggat tacaggcgtg agccaccatg ccccgcctca agtctggttt
3061 ttaagtgttg taaagccgat acaatgatga taacatagtt cagcagacta acgctgatga
3121 gcaatattaa gtctttcgct cctatctgat gtatctggcg gtaacattct agtttatgcc
3181 ccgaaaaggg gaatatagcc attctataat gtttggagat tttggattac tcctaattgt
3241 atgcaagttg tcttactgtg tattgtccct taatttcagg actcagaatt catgattgaa
3301 gaaatgcagg ttagtttaaa ctttgaagga aattttaagg tggcaaaagg ttttggtggc
3361 atatacacct taatctgtag atgggagtga ttagctgttt aaaagttaaa atgtgactga
3421 gaaggaaatt gagtagggca aattttaaat gggtattatt tttcatnttc aaacaggcag
3481 acctgttatc ctaaactagg tgagtcagct tttggnacat gtgatgattt tcagtgtaac
3541 caatgatgta atgattctgc caaatgaaat ataatgatat cactgtaaaa ccgttccatt
3601 ttgattctga ggttactcta ctaacaagca tcacacattt gtattttgcc ctgattaata
3661 tgttggcttc gctttcaggg tttttaatga ccacaacaag caagcatgca gcttactgct
3721 tgaaaggtga ggattggaaa tgttgggact attataattg cagaatacat gatgatctca
3781 atccaacttg aactctctca ctgattactt gatgacaata aaatatctga tattctgcat
3841 tcccatgtag cattttaatt gaagtctgta aatgtggcta aaagtcttgt cttatttttt
3901 gagacagggt cttgcctcac ccaagctaga gtgcagtggc ctttgaagct tactacagcc
3961 tcaaacttct gggctcaagt gatcctcagc ctcccagtgg tctttgtaga ctgcctgatg
4021 gagtctcatg gcacaagaag attaaaacag tgtct
//