LOCUS AF135802 4965 bp mRNA linear HUM 09-APR-1999 DEFINITION Homo sapiens thyroid hormone receptor-associated protein complex component TRAP170 mRNA, complete cds. ACCESSION AF135802 VERSION AF135802.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4965) AUTHORS Gu,W., Malik,S., Ito,M., Yuan,C.X., Fondell,J.D., Zhang,X., Martinez,E., Qin,J. and Roeder,R.G. TITLE A novel human SRB/MED-containing cofactor complex, SMCC, involved in transcription regulation JOURNAL Mol. Cell 3 (1), 97-108 (1999) PUBMED 10024883 REFERENCE 2 (bases 1 to 4965) AUTHORS Ito,M., Yuan,C.X., Malik,S., Gu,W., Fondell,J.D., Yamamura,S., Fu,Z.Y., Zhang,X., Qin,J. and Roeder,R.G. TITLE Identity between TRAP and SMCC complexes indicates novel pathways for the function of nuclear receptors and diverse mammalian activators JOURNAL Mol. Cell 3 (3), 361-370 (1999) PUBMED 10198638 REFERENCE 3 (bases 1 to 4965) AUTHORS Ito,M., Fondell,J.D. and Roeder,R.G. TITLE Direct Submission JOURNAL Submitted (18-MAR-1999) Laboratory of Biochemistry and Molecular Biology, The Rockefeller University, 1230 York Avenue, New York, NY 10021-6399, USA FEATURES Location/Qualifiers source 1..4965 /db_xref="H-InvDB:HIT000071063" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /cell_line="HeLa" CDS 74..4438 /note="yeast RGR1 homolog" /codon_start=1 /product="thyroid hormone receptor-associated protein complex component TRAP170" /protein_id="AAD24360.1" /translation="MAPVQLENHQLVPPGGGGGGSGGPPSAPAPPPPGAAVAAAAAAA ASPGYRLSTLIEFLLHRAYSELMVLTDLLPRKSDVERKIEIVQFASRTRQLFVRLLAL VKWANNAGKVEKCAMISSFLDQQAILFVDTADRLASLARDALVHARLPSFAIPYAIDV LTTGSYPRLPTCIRDKIIPPDPITKIEKQATLHQLNQILRHRLVTTDLPPQLANLTVA NGRVKFRVEGEFEATLTVMGDDPDVPWRLLKLEILVEDKETGDGRALVHSMQISFIHQ LVQSRLFADEKPLQDMYNCLHSFCLSLQLEVLLTQTLMLIRERWGDLVQVERYHAGKC LSLSVWNQQVLGRKTGTASVHKVTIKIDENDVSKPLQIFHDPPLPASDSKLVERAMKI DHLSIEKLLIDSVHARAHQKLQELKAILRGFNANENSSIETALPALVVPILEPCGNSE CLHIFVDLHSGMFQLMLYGLDQATLDDMEKSVNDDMKRIIPWIQQLKFWLGQQRCKQS IKHLPTISSETLQLSNYSTHPIGNLSKNKLFIKLTRLPQYYIVVEMLEVPNKPTQLSY KYYFMSVNAADREDSPAMALLLQQFKENIQDLVFRTKTGKQTRTNAKRKLSDDPCPVE SKKTKRAGEMCAFNKVLAHFVAMCDTNMPFVGLRLELSNLEIPHQGVQVEGDGFSHAI RLLKIPPCKGITEETQKALDRSLLDCTFRLQGRNNRTWVAELVFANCPLNGTSTREQG PSRHVYLTYENLLSEPVGGRKVVEMFLNDWNSIARLYECVLEFARSLPDIPAHLNIFS EVRVYNYRKLILCYGTTKGSSISIQWNSIHQKFHISLGTVGPNSGCSNCHNTILHQLQ EMFNKTPNVVQLLQVLFDTQAPLNAINKLPTVPMLGLTQRTNTAYQCFSILPQSSTHI RLAFRNMYCIDIYCRSRGVVAIRDGAYSLFDNSKLVEGFYPAPGLKTFLNMFVDSNQD ARRRSVNEDDNPPSPIGGDMMDSLISQLQPPPQQQPFPKQPGTSGAYPLTSPPTSYHS TVNQSPSMMHTQSPGNLHAASSPSGALRAPSPASFVPTPPPSSHGISIGPGASFASPH GTLDPSSPYTMVSPSGRAGNWPGSPQVSGPSPAARMPGMSPANPSLHSPVPDASHSPR AGTSSQTMPTNMPPPRKLPQRSWAASIPTILTHSALNILLLPSPTPGLVPGLAGSYLC SPLERFLGSVIMRRHLQRIIQQETLQLINSNEPGVIMFKTDALKCRVALSPKTNQTLQ LKVTPENAGQWKPDELQVLEKFFETRVAGPPFKANTLIAFTKLLGAPTHILRDCVHIM KLELFPDQATQLKWNVQFCLTIPPSAPPIAPPGTPAVVLKSKMLFFLQLTQKTSVPPQ EPVSIIVPIIYDMASGTTQQADIPRQQNSSVAAPMMVSNILKRFAEMNPPRQGECTIF AAVRDLMANLTLPPGGRP" regulatory 4945..4950 /regulatory_class="polyA_signal_sequence" polyA_site 4965 BASE COUNT 1378 a 1194 c 1042 g 1351 t ORIGIN 1 gcggtgaccg agcgcccggg aggctcgagg accgcatcgt gtgccgttgc gccaagcccg 61 gtcctgcgcc gccatggccc cagtgcagct ggagaaccac cagctggtcc cgcccggagg 121 cggcggcggg ggcagcggcg gacccccgtc agccccagcc cctcctcccc cgggagccgc 181 cgtggcggcg gccgctgcag ctgcggctag cccgggctac cggctgagca ccctcattga 241 atttctgctg caccgggcct actcggagct tatggtgttg acggacctac tgccaaggaa 301 atctgatgtg gaaaggaaaa tagaaatagt gcagtttgct agccggacac gccaactctt 361 cgttcgatta ttagctttag tgaaatgggc taataatgct ggcaaagtgg aaaaatgtgc 421 gatgatttca agctttttag atcagcaagc catcctgttt gtggacactg ctgatcgcct 481 ggcctcgtta gctagagatg ctctggtcca tgcacgcctg cctagttttg ccatcccata 541 tgccattgat gtactaacta ctggatctta cccacggctg ccaacctgca ttagggataa 601 aattattcct ccagacccaa ttaccaaaat tgaaaaacaa gccacactcc atcagctgaa 661 tcagattctt agacatcggc ttgtaaccac agatcttcct cctcagttag caaatcttac 721 agttgcaaat ggccgggtga agtttcgtgt tgaaggagaa tttgaagcca ccttgactgt 781 gatgggagat gaccctgatg ttccatggcg tcttctcaag ctagaaattc tagttgagga 841 taaggaaaca ggagatgggc gagctttggt tcatagcatg caaatcagct tcatccatca 901 actggtgcag tctaggctct ttgctgatga gaaacctctt caggatatgt acaactgcct 961 acattctttc tgtttatcac ttcagttaga agtgttactt acccaaactc taatgttaat 1021 ccgagaacgg tggggagacc ttgtgcaggt ggaaaggtat catgctggaa agtgcctctc 1081 cctttcagtt tggaatcaac aggttcttgg gagaaaaact ggaacagcat ctgttcacaa 1141 agttacaatt aaaattgatg agaatgatgt ctccaagcct ttacagattt ttcacgatcc 1201 tcctttgcca gcttctgatt ccaaattagt agaaagagcc atgaagatcg accacttatc 1261 aatagaaaaa ctcctgattg acagtgtcca tgcaagagct catcagaagc tccaagaact 1321 gaaggccatt cttagaggct tcaatgccaa tgaaaactct tccatagaga ctgcactccc 1381 agctcttgtt gttcccatct tggagccctg tggtaattca gagtgtctgc acatttttgt 1441 agatttacat tctggaatgt ttcaattgat gctttatgga cttgaccagg ccactctgga 1501 tgacatggag aagtctgtga atgatgatat gaaacgaatc ataccctgga ttcagcaact 1561 taagttttgg cttggacaac agcgttgcaa gcagtctata aaacatctgc ctacgataag 1621 cagtgaaaca ttgcagcttt ccaattactc aactcatcct attggaaacc tttctaagaa 1681 taaactgttc attaaactta cccgccttcc acaatactac attgttgtgg agatgttgga 1741 ggttcccaat aaacccacac aactgtcgta caagtactac tttatgtctg tgaatgctgc 1801 agatcgtgaa gacagccctg caatggcatt gctgctgcag cagttcaagg aaaacattca 1861 ggacttggtt tttcgtacaa aaaccgggaa acagaccaga accaatgcca agcgcaagtt 1921 gtctgatgat ccatgtccag tagaatccaa gaaaacaaaa cgagcaggag aaatgtgtgc 1981 cttcaataaa gttttagccc acttcgtcgc tatgtgtgat acaaatatgc catttgtagg 2041 acttcggttg gagttgtcca atctggagat tccacatcaa ggagtgcaag tggaaggtga 2101 tggcttcagc catgcaattc gcttattaaa aattcctccc tgtaagggta taactgagga 2161 aacccaaaag gctctggacc gctctcttct tgattgcact ttccgattac aaggtagaaa 2221 taaccgcact tgggtagcag agttagtgtt tgcaaattgt ccacttaatg gcacttctac 2281 tagggagcaa ggaccatccc ggcacgttta cctgacatat gaaaatctgt tgtctgagcc 2341 tgttggtggt agaaaggtgg ttgaaatgtt tcttaatgac tggaatagca ttgcacgatt 2401 atatgagtgt gtgttggaat ttgcacgttc tctaccagac atacctgctc atctaaatat 2461 tttctcagaa gttcgtgttt ataattaccg aaaacttatc ttgtgttatg gaaccaccaa 2521 gggaagctca attagtatcc aatggaattc gatccatcaa aaattccaca tttctttggg 2581 aactgttggc ccaaactcag gttgcagtaa ctgtcacaat accattctcc atcagcttca 2641 agaaatgttc aacaaaacac caaatgtggt tcagttatta caggtactgt ttgatactca 2701 ggctccatta aatgccatca acaaactccc cactgtgccg atgttgggct tgacccagag 2761 aaccaatact gcctaccagt gcttctccat tctgccacag tcgtccaccc acatcagact 2821 ggccttcagg aacatgtatt gcattgatat atactgccgg agtcgaggtg ttgtggcaat 2881 acgggatggt gcctatagtc tttttgataa cagcaaacta gttgaaggtt tctatcctgc 2941 accaggacta aagacgttcc tgaatatgtt tgttgacagc aatcaggatg ctcgaagaag 3001 gtctgtaaat gaggacgata atcccccttc tcctatagga ggagatatga tggattcttt 3061 aatatcgcag ctccagccac caccccagca acagccattt ccaaagcagc caggaacatc 3121 aggtgcttat cctcttactt caccccctac atcttatcat agcacagtca atcagtctcc 3181 ctcaatgatg cacacacagt ctccaggaaa tctgcatgct gccagctccc ccagtggggc 3241 tttgagagcc ccatcaccag cgtcatttgt tccaactcct cccccatcct cgcatggaat 3301 ctcaatagga ccaggggcca gttttgctag tccacatgga actcttgacc ctagttcccc 3361 atacactatg gtgtcaccaa gtggacgagc agggaactgg ccaggatctc ctcaagtgtc 3421 tggcccctca ccagcagcac gcatgcctgg aatgtcacca gccaacccct cactacattc 3481 tccggttcca gatgcttctc attcccctcg agctggaaca agttctcaaa caatgccaac 3541 aaacatgcct ccacctcgta aactacctca gcgctcttgg gcggcatcca tacctaccat 3601 cctcactcac agtgccttga acattttact gctgccctct ccaactccag gccttgtgcc 3661 cggcctggca ggtagttacc tttgttctcc acttgagaga ttccttggat cagtcatcat 3721 gagacgacat cttcaaagaa ttattcaaca agaaacgctg cagctgataa attctaatga 3781 acccggagtg atcatgttta agactgatgc actgaaatgc agagtagctc ttagtcccaa 3841 aaccaaccaa acgcttcagc taaaagtgac acctgaaaat gcaggacagt ggaaacctga 3901 tgaacttcaa gttttggaga aattctttga aacaagagtt gcaggaccac catttaaagc 3961 taatacgtta atagccttca ccaagctatt aggagctcct acacacatcc tcagggattg 4021 tgtgcacatt atgaagctgg agctgttccc tgaccaagca acacagctaa aatggaatgt 4081 tcagttttgc ctgacgatcc ctcccagcgc gccgccgatt gcacctcctg ggacgcctgc 4141 tgtggtgctg aaatccaaaa tgctattttt tcttcaacta actcagaaaa catcggtccc 4201 tccccaagaa cctgttagta ttatagttcc aatcatttat gacatggctt caggtacaac 4261 ccagcaggca gacattccca gacagcagaa ctcttctgtt gctgctccca tgatggtcag 4321 caacattctg aagaggtttg cagagatgaa tccaccacga caaggtgaat gcacaatatt 4381 tgcagctgtt cgtgatttaa tggctaatct tacactgccc cctggtgggc gtccatagac 4441 actattgttt ttaaaccagg aaggctgaca gatgagacaa caaaaaaatc tgaattcagc 4501 cttcagttta aaaaaggaaa aggacttttt ttttaaactt taagagctaa atattctaaa 4561 ctggcaaaaa ttttcagggt gcacttcttt catcaaaatg atcatccatc ttttgtataa 4621 tgaacttgta tagtgtgttt aaatgggaca catttcaaag gaaataaatc agtgtccgtt 4681 tgccagtaat aaatttaata ttctgtttta tactataaag ttatgaaaat gccaaacttg 4741 tttatttaat tgttttctta tgttttgggt gtaatagtcc ttttttggtt tttgttttgt 4801 tttttaaggc aggtctgtca tttttgaata ctgtaaaact gtgataaact ttatattgaa 4861 gctgtatttt aatatgaccg ctttgaatcc ttacatgaaa tgttctggga gttgttataa 4921 acacacccca aggaagcaat atttaataaa actaggtcaa aaacg //