LOCUS AF128458 6842 bp mRNA linear HUM 23-DEC-2016
DEFINITION Homo sapiens nuclear receptor coactivator RAP250 mRNA, complete
cds.
ACCESSION AF128458
VERSION AF128458.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6842)
AUTHORS Caira,F., Antonson,P., Pelto-Huikko,M., Treuter,E. and
Gustafsson,J.A.
TITLE Cloning and characterization of RAP250, a novel nuclear receptor
coactivator
JOURNAL J. Biol. Chem. 275 (8), 5308-5317 (2000)
PUBMED 10681503
REFERENCE 2 (bases 1 to 6842)
AUTHORS Caira,F., Antonson,P., Pelto-Huikko,M., Gustafsson,J.-A. and
Treuter,E.
TITLE Direct Submission
JOURNAL Submitted (15-FEB-1999) Center for Biotechnology, Karolinska
Institutet, Novum, Huddinge 14157, Sweden
REFERENCE 3 (bases 1 to 6842)
AUTHORS Caira,F., Antonson,P., Pelto-Huikko,M., Gustafsson,J.-A. and
Treuter,E.
TITLE Direct Submission
JOURNAL Submitted (23-DEC-2016) Center for Biotechnology, Karolinska
Institutet, Novum, Huddinge 14157, Sweden
REMARK Sequence update by database staff to remove vector contamination
COMMENT On Dec 23, 2016 this sequence version replaced AF128458.1.
FEATURES Location/Qualifiers
source 1..6842
/db_xref="H-InvDB:HIT000070587"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/tissue_type="testis"
CDS 167..6358
/note="nuclear receptor-interacting protein PIP23"
/codon_start=1
/product="nuclear receptor coactivator RAP250"
/protein_id="AAF37003.1"
/translation="MVLDDLPNLEDIYTSLCSSTMEDSEMDFDSGLEDDDTKSDSILE
DSTIFVAFKGNIDDKDFKWKLDAILKNVPNLLHMESSKLKVQKVEPWNSVRVTFNIPR
EAAERLRILAQSNNQQLRDLGILSVQIEGEGAINLALAQNRSQDVRMNGPMGAGNSVR
MEAGFPMASGPGIIRMNNPATVMIPPGGNVSSSMMAPGPNPELQPRTPRPASQSDAMD
PLLSGLHIQQQSHPSGSLAPPHHPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQ
QQQQQQQQQLQARPPQQHQQQQPQGIRPQFTAPTQVPVPPGWNQLPSGALQPPPAQGS
LGTMTANQGWKKAPLPGPMQQQLQARPSLATVQTPSHPPPPYPFGSQQASQAHTNFPQ
MSNPGQFTAPQMKSLQGGPSRVPTPLQQPHLTNKSPASSPSSFQQGSPASSPTVNQTQ
QQMGPRPPQNNPLPQGFQQPVSSPGRNPMVQQGNVPPNFMVMQQQPPNQGPQSLHPGL
GGMPKRLPPGFSAGQANPNFMQGQVPSTTATTPGNSGAPQLQANQNVQHAGGQGAGPP
QNQMQVSHGPPNMMQPSLMGIHGNMNNQQAGTSGVPQVNLSNMQGQPQQGPPSQLMGM
HQQIVPSQGQMVQQQGTLNPQNPMILSRAQLMPQGQMMVNPPSQNLGPSPQRMTPPKQ
MLSQQGPQMMAPHNQMMGPQGQVLLQQNPMIEQIMTNQMQGNKQQFNTQNQSNVMPGP
AQIMRGPTPNMQGNMVQFTGQMSGQMLPQQGPVNNSPSQVMGIQGQVLRPPGPSPHMA
QQHGDPATTANNDVSLSQMMPDVSIQQTNMVPPHVQAMQGNSASGNHFSGHGMSFNAP
FSGAPNGNQMSCGQNPGFPVNKDVTLTSPLLVNLLQSDISAGHFGVNNKQNNTNANKP
KKKKPPRKKKNSQQDLNTPDTRPAGLEEADQPPLPGEQGISLDNSGPKLPEFSNRPPG
YPSQPVEQRPLQQMPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPPPSQPQSQQQQQQQ
QQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNPDSQRMPMQQSGSVPVMVSLQGPASV
PPSPDKQRMPMPVNTPLGSNSRKMVYQESPQNPSSSPLAEMASLPEASGSEAPSVPGG
PNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATPQQPPVNSLPSSHGHHFPNVAAPT
QTSRPKTPNRASPRPYYPQTPNNRPPSTEPSEISLSPERLNASIAGLFPPQINIPLPP
RPNLNRGFDQQGLNPTTLKAIGQAPSNLTMNPSNFATPQTHKLDSVVVNSGKQSNSGA
TKRASPSNSRRSSPGSSRKTTPSPGRQNSKAPKLTLASQTNAALLQNVELPRNVLVSP
TPLANPPVPGSFPNNSGLNPQNSTVSVAAVGGVVEDNKESLNVPQDSDCQNSQSRKEQ
VNIELKAVPAQEVKMVVPEDQSKKDGQPSDPNKLPSVEENKNLVSPAMREAPTSLSQL
LDNSGAPNVTIKPPGLTDLEVTPPVVSGEDLKKASVIPTLQDLSSSKEPSNSLNLPHS
NELCSSLVHPELSEVSSNVAPSIPPVMSRPVSSSSISTPLPPNQITVFVTSNPITTSA
NTSAALPTHLQSALMSTVVTMPNAGSKVMVSEGQSAAQSNARPQFITPVFINSSSIIQ
VMKGSQPSTIPAAPLTTNSGLMPPSVAVVGPLHIPQNIKFSSAPVPPNALSSSPAPNI
QTGRPLVLSSRATPVQLPSPPCTSSPVVPSHPPVQQVKELNPDEASPQVNTSADQNTL
PSSQSTTMVSPLLTNSPGSSGNRRSPVSSSKGKGKVDKIGQILLTKACKKVTGSLEKG
EEQYGADGETEGQGLDTTAPGLMGTEQLSTELDSKTPTPPAPTLLKMTSSPVGPGTAS
AGPSLPGGALPTSVRSIVTTLVPSELISAVPTTKSNHGGIASESLAGGLVEEKVGSHP
ELLPSIAPSQNLVSKETSTTALQASVARPELEVNAAIVSGQSSEPKEIVEKSKIPGRR
NSRTEEPTVASESVENGHRKRSSRPASASSSTKDITSAVQSKRRKSK"
BASE COUNT 1932 a 1928 c 1494 g 1488 t
ORIGIN
1 cagaattttg atttggctgc tgggctgcta ccttgaaatc caagccctaa aaatgccagc
61 ttctttggac ttagaagatg acctggataa atgataaaaa ttaagaaaga gattttgaag
121 ttttcttatt gtcctcttgg catatgcttc tggaataata ttcaccatgg ttttggatga
181 ccttccaaac ttagaagaca tctatacttc cttgtgttca tcaacaatgg aagactcaga
241 gatggatttt gactctggac tagaagatga tgacacaaaa agtgatagta ttttggagga
301 ttccacaatt tttgtggcct tcaaaggaaa tatagatgat aaagacttca aatggaaatt
361 agatgcaata ttgaaaaacg tgcccaattt gttacacatg gagtccagca agctaaaagt
421 acagaaggtg gagccctgga acagcgtgcg tgtgacattc aacatccccc gggaagcagc
481 ggagcggcta cggatccttg ctcagagcaa caaccagcag cttcgggatt tagggattct
541 ctccgttcag attgaagggg aaggtgctat taacctggct ttggctcaga accgaagcca
601 agatgtgaga atgaatggac ccatgggagc tggaaattca gttaggatgg aggcgggatt
661 tcctatggca agtggtccag gaataataag gatgaacaac cctgccactg ttatgatacc
721 cccgggtgga aatgtgtcat cttccatgat ggcaccaggc cccaatccag agctgcagcc
781 caggactcct cgccctgctt ctcagtcaga tgcaatggat ccactcctct ctgggctcca
841 tatacagcag caaagtcatc cctcaggatc tttagctccc ccacatcacc caatgcagcc
901 tgtctctgtg aacagacaaa tgaacccagc taattttccc cagctgcagc agcagcagca
961 acaacaacaa cagcagcagc agcagcagca gcagcaacaa cagcaacagc agcaacaaca
1021 gttgcaggca agacccccac agcaacatca gcagcaacag ccacagggaa ttcgacccca
1081 gtttactgcc ccaactcagg tgcctgttcc tccaggctgg aaccagctgc cttctggagc
1141 ccttcaacct cctccagccc agggttctct gggcacaatg actgcaaacc aagggtggaa
1201 gaaggctccc ttgcccggcc caatgcaaca gcaactccag gcaagaccat ccttagccac
1261 ggtacagacg ccttcccacc ctccccctcc atatcccttt ggcagccagc aagcctcaca
1321 agcccacaca aactttcctc agatgagcaa cccaggccag ttcacagctc ctcagatgaa
1381 gagtttgcag ggagggccct ctagggtccc aactcccttg cagcagcccc acctcaccaa
1441 caagtctcct gcctcctcac cctcctcctt ccagcaggga tcccctgcat cctccccaac
1501 ggttaaccaa actcagcagc agatgggacc aaggccacct caaaataacc cacttcccca
1561 gggatttcag cagcctgtca gctctccggg tcggaatcct atggttcaac agggaaatgt
1621 gccacctaac ttcatggtga tgcagcagca accaccaaac caggggccac agagtttaca
1681 tccaggccta ggaggaatgc ctaaacgcct cccacctggc ttctcagcag gacaggccaa
1741 tccgaacttt atgcaaggtc aggtgccttc gaccacagca accacccctg ggaattcagg
1801 agcccctcag ctgcaagcaa atcaaaatgt ccagcatgca ggtggtcaag gagctggtcc
1861 tcctcaaaac cagatgcagg tgtcccacgg gccgccaaat atgatgcagc ccagcctcat
1921 gggaattcat ggcaacatga acaatcagca ggctggtact tctggggttc ctcaagtgaa
1981 cctcagcaac atgcaaggcc agccccagca gggcccacca tctcagctga tgggcatgca
2041 ccagcaaatc gtgccctccc agggccagat ggtccagcaa caaggaacct tgaaccctca
2101 gaaccctatg atcctttcaa gggcccagct tatgccacag ggccagatga tggtgaaccc
2161 cccgagccaa aatcttgggc cctcgcccca aaggatgacc ccacccaagc agatgctttc
2221 ccagcagggc ccacaaatga tggcgccaca taaccagatg atggggcctc aggggcaggt
2281 tttgctccaa cagaacccaa tgatagagca gattatgacc aatcaaatgc aggggaataa
2341 gcagcagttt aacactcaga accagtccaa tgtcatgccg ggaccagccc agataatgag
2401 gggaccaact ccgaacatgc aaggaaatat ggtgcagttt acgggacaga tgtcaggaca
2461 gatgctgccc cagcaagggc ctgtgaacaa cagtccatct caggttatgg gcattcaggg
2521 acaggtcctg cggccaccag ggcccagccc acacatggcc cagcagcatg gtgatcctgc
2581 tactacagca aataacgatg tcagtttatc tcagatgatg cctgatgtta gcattcaaca
2641 aaccaacatg gtcccccctc atgtgcaggc catgcaggga aacagtgcct cgggaaacca
2701 cttctcaggc catgggatgt ctttcaatgc acctttcagt ggagctccca atggaaatca
2761 gatgtcctgt ggtcaaaatc caggcttccc agtcaataag gatgtcacgc taacgagccc
2821 attgttggtc aacttattgc agagtgacat atctgcaggc cattttgggg taaacaataa
2881 gcaaaataat accaacgcaa ataaaccgaa gaagaagaaa ccccctcgga agaagaaaaa
2941 tagtcagcaa gatctaaaca ccccagatac tcgcccagct ggtctggaag aggctgatca
3001 gccaccgttg cctggagaac aaggaattag cttggataac tcaggcccta aactgccaga
3061 attttcaaac cggccaccag gttatccttc tcaaccagtt gaacagaggc cacttcagca
3121 gatgcctcct caactcatgc agcatgtggc acccccacca cagccaccac agcagcagcc
3181 acagccacaa ctgcctcagc agcagcagcc accacctccc agtcagccac agtctcagca
3241 gcagcagcag cagcagcaac aaatgatgat gatgctcatg atgcagcagg atcccaaatc
3301 agttaggctt ccagtctctc aaaatgtcca tcctccaagg ggccccctga accccgactc
3361 ccagagaatg cccatgcaac agagtggcag tgtgcctgtc atggtcagtc tgcaaggacc
3421 tgcctccgtg ccaccatcac ctgataaaca aagaatgcca atgcctgtga atactccctt
3481 gggaagcaat tcaaggaaaa tggtctatca ggagagcccg cagaatcctt ccagctcgcc
3541 actggcggag atggcctcac tccctgaagc aagtggcagt gaagcaccat ctgtcccagg
3601 aggcccaaac aacatgcctt cacatgtagt acttccccag aatcagttaa tgatgacagg
3661 gccaaaacct ggaccatcgc ccctttcagc aactcaaggt gcaactcccc agcaaccccc
3721 tgtaaattcc ctgcccagct ctcacggcca ccacttccca aatgtggctg cgccaaccca
3781 gacatctagg cccaaaacac caaacagagc cagccccaga ccctattatc ctcagacacc
3841 caacaaccgc cctcccagca cagaaccttc agaaatcagt ctgtcaccag aaagactcaa
3901 tgcctccata gcaggactct tccctccaca gattaatatt cctttacctc ctaggccaaa
3961 tttaaacagg ggctttgatc aacaaggcct aaatccaaca actttgaagg ccatcgggca
4021 agcaccttca aatcttacca tgaatccttc caattttgct accccacaaa ctcacaaatt
4081 agattctgtg gtagtgaatt ctggaaagca gtctaattct ggagcaacaa aacgggcaag
4141 tccaagcaac agtcgcaggt ctagtcctgg gtccagtagg aaaaccactc caagccctgg
4201 gaggcaaaat tcaaaagccc ctaaacttac tctggcctct cagacaaatg cagccctatt
4261 gcagaatgtg gagttgccga gaaatgtatt ggtcagtccc actcctctgg ccaatccccc
4321 tgtacctggg agctttccta acaacagtgg gctgaatcct cagaattcta ctgtgtctgt
4381 ggctgcagtt gggggtgttg ttgaggataa caaggagagc ttgaatgtgc ctcaggacag
4441 tgattgccag aattcccaga gtaggaagga acaggtaaac attgaactaa aagcagtccc
4501 tgcccaagaa gttaaaatgg ttgtccctga agatcagtcc aaaaaggatg ggcagccttc
4561 ggatcctaac aaacttccca gtgtcgaaga gaacaaaaat ttggtgtctc ctgctatgag
4621 ggaagcacca acatcgttaa gtcaacttct tgacaactct ggagctccca atgtgacaat
4681 taaaccccct gggcttacag atctggaagt aacacctcca gtagtttctg gggaggacct
4741 caaaaaagca tctgtcattc ccacactgca ggatctgtct tcttctaaag aaccttctaa
4801 ttccctaaac ttacctcaca gtaatgagct gtgttcatcc cttgtgcatc ccgaattgag
4861 tgaggtcagt tctaacgttg caccaagcat ccctccagta atgtcaagac ctgttagctc
4921 ttcctccatt tccactccct tgcccccaaa tcaaataact gtatttgtca cttccaatcc
4981 catcacaact tcagctaaca catcagcagc tttgccaact cacttgcagt ctgcattgat
5041 gtcaacagtt gtcacaatgc ccaatgcggg tagcaaggtt atggtttctg agggacagtc
5101 agctgctcag tctaatgccc ggcctcagtt cattacacct gtctttatca attcatcctc
5161 aataattcag gttatgaaag gatcacagcc aagcacaatt cctgcagccc cactgacaac
5221 caactctggc ctgatgcctc cctctgttgc agttgttggc cctttacaca tacctcagaa
5281 cataaaattt tcttctgctc ctgtaccgcc taatgccctc tccagtagtc ctgctccaaa
5341 catccagaca ggtcgacctt tggtccttag ctcacgagcc acccctgttc agcttccttc
5401 ccctccttgt acgtcttctc cagttgtccc ttctcatccc cctgtgcagc aagtgaaaga
5461 attgaatcca gatgaggcta gccctcaggt gaacacctca gcagatcaga acactcttcc
5521 ctcttcacag tcaaccacaa tggtttctcc ccttttgacc aatagtccag ggtcctctgg
5581 caaccggcga agcccagtct cgtctagtaa gggcaaagga aaagtggaca aaattggcca
5641 aattttgttg accaaggcat gtaagaaagt tacaggctct cttgagaaag gggaagaaca
5701 atatggtgca gatggagaga ctgaaggcca agggctagac accacagctc cggggctcat
5761 gggaacagag cagttatcca cagagctgga cagtaaaacc ccaacgcccc cagcacccac
5821 tctgctaaaa atgacctcta gccctgtggg cccgggcact gcctcagcag gacccagctt
5881 acctggcggt gctctcccca ccagtgtacg ctcgatagta accactctgg taccctccga
5941 gctcatctcc gccgtaccga ccacaaaaag caatcatggt ggcatagcat ctgagtcact
6001 tgcgggtggc ctagtggagg agaaggtggg atcccatcca gaacttctac ccagcatagc
6061 cccgtcgcag aatttagtct caaaggaaac ttcaaccaca gcactgcagg cctctgttgc
6121 cagaccagag ctggaggtaa atgctgccat agtctctgga caaagcagtg agcccaaaga
6181 gatagttgaa aagtccaaaa tcccaggccg aagaaactcc cgaactgaag agccaactgt
6241 ggcctctgaa agtgtggaaa atggacatcg taaacgatct tctcgacctg cttcagcctc
6301 cagctctact aaagacataa ccagtgcggt gcaatccaag cgaagaaaat ccaagtaaac
6361 aagcaggact gcgacttgat acttggaaat gtgtgtgact tttacaaaga gcaattttga
6421 gctgtgactt ttttaaatca atttctgtac agttagtaat tttaataatg tggccctttt
6481 cctagtccct gcaacctgtt tcataaagtg caatggggaa agcaggactg ttgagccctt
6541 ttggtgttgc gagttgaagt tcaaggtttc taaaatgttg tcttgtattg aaaggagcta
6601 atgccattat aaatgttact agttttcaca tttcctaagc agcctagagt acagggtgag
6661 catttttaga tctcctaatg tattgtgccg tggaagtact gtgtgtgaat agcagtagtg
6721 ggggcaaaag caatcttctc atttggaaat gttgtaaata attttattat atagtgtttt
6781 ggatgtattt gttgtagaaa tggaccagtg aataaagaga atctaaggat ttgtacaatg
6841 tg
//