LOCUS AF121856 1947 bp mRNA linear HUM 21-DEC-2016
DEFINITION Homo sapiens sorting nexin 6 (SNX6) mRNA, complete cds.
ACCESSION AF121856
VERSION AF121856.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1947)
AUTHORS Teasdale,R.D., Loci,D., Houghton,F., Karlsson,L. and Gleeson,P.A.
TITLE A large family of endosome-localized proteins related to sorting
nexin 1
JOURNAL Biochem. J. 358 (Pt 1), 7-16 (2001)
PUBMED 11485546
REFERENCE 2 (bases 1 to 1947)
AUTHORS Teasdale,R.D., Gleeson,P.A. and Karlsson,L.
TITLE Identification of eleven novel human sorting nexin molecules. A
sub-group of the sorting nexin family is associated with the early
endosomes
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 1947)
AUTHORS Teasdale,R.D., Gleeson,P.A. and Karlsson,L.
TITLE Direct Submission
JOURNAL Submitted (22-JAN-1999) The R.W. Johnson Pharmaceutical Research
Institute, 3535 General Atomics Court, San Diego, CA 92121, USA
REFERENCE 4 (bases 1 to 1947)
AUTHORS Teasdale,R.D., Gleeson,P.A. and Karlsson,L.
TITLE Direct Submission
JOURNAL Submitted (21-DEC-2016) The R.W. Johnson Pharmaceutical Research
Institute, 3535 General Atomics Court, San Diego, CA 92121, USA
REMARK Sequence update by database staff to remove vector contamination
COMMENT On Dec 21, 2016 this sequence version replaced AF121856.1.
FEATURES Location/Qualifiers
source 1..1947
/db_xref="H-InvDB:HIT000070333"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
gene 1..1947
/gene="SNX6"
CDS 14..1234
/gene="SNX6"
/codon_start=1
/product="sorting nexin 6"
/protein_id="AAD27829.1"
/translation="MMEGLDDGPDFLSEEDRGLKAINVDLQSDAALQVDISDALSERD
KVKFTVHTKSSLPNFKQNEFSVVRQHEEFIWLHDSFVENEDYAGYIIPPAPPRPDFDA
SREKLQKLGEGEGSMTKEEFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRRD
LNFHVFLEYNQDLSVRGKNKKEKLEDFFKNMVKSADGVIVSGVKDVDDFFEHERTFLL
EYHNRVKDASAKSDRMTRSHKSAADDYNRIGSSLYALGTQDSTDICKFFLKVSELFDK
TRKIEARVSADEDLKLSDLLKYYLRESQAAKDLLYRRSRSLVDYENANKALDKARAKN
KDVLQAETSQQLCCQKFEKISESAKQELIDFKTRRVAAFRKNLVELAELELKHAKGNL
QLLQNCLAVLNGDT"
BASE COUNT 645 a 335 c 381 g 586 t
ORIGIN
1 cctcggagca accatgatgg aaggcctgga cgacggcccg gacttcctct cagaagagga
61 ccgcggactt aaagcaataa atgtagatct tcaaagtgat gctgctctgc aggtggacat
121 ttctgatgct cttagtgagc gggataaagt aaaattcact gttcacacaa agagttcatt
181 gccaaatttt aaacaaaacg agttttcagt tgttcggcaa catgaggaat ttatctggct
241 tcatgattcc tttgttgaaa atgaagacta tgcaggttat atcattccac cagcaccacc
301 aagacctgat tttgatgctt caagggaaaa actacagaag cttggtgaag gagaagggtc
361 aatgacgaag gaagaattca caaagatgaa acaggaactg gaagctgaat atttggcaat
421 attcaagaag acagttgcga tgcatgaagt gttcctgtgt cgtgtggcag cacatcctat
481 tttgagaaga gatttaaatt tccatgtctt cttggaatat aatcaagatt tgagtgtgcg
541 aggaaaaaat aaaaaagaga aacttgaaga cttctttaaa aacatggtta aatcagcaga
601 tggagtaatc gtttcaggag taaaggatgt agatgatttc tttgagcacg aacgaacatt
661 tcttttggaa tatcataacc gagttaagga tgcatctgct aaatctgata gaatgacaag
721 atcccacaaa agtgctgcag atgattacaa tagaattggt tcttcattat atgctttagg
781 aactcaggat tctacagata tatgcaagtt ttttctcaaa gtttcagaac tgttcgataa
841 aacaagaaaa atagaagcac gagtgtctgc tgatgaagac ctcaaacttt ctgatctttt
901 aaaatattac ttaagagaat ctcaagctgc taaggatctc ctgtatcgaa ggtctaggtc
961 actagtggat tatgaaaatg ctaataaagc actggataaa gcaagagcaa aaaataaaga
1021 tgttctacag gccgaaactt cccaacaatt atgttgtcag aaatttgaaa aaatatctga
1081 gtctgcaaaa caagaactta tagattttaa gacaagaaga gttgctgcat tcagaaaaaa
1141 tttagtggaa ctggcagagt tagaactgaa gcatgcaaag ggtaatctac agttgctgca
1201 gaactgcctg gcagtgttaa atggagacac ataagccaca ctccgccttc ctgttaaaaa
1261 gggctgcctt ccttcaaatt ttatttttgt tttcttaatg atgttaagca tttatgctca
1321 ctggaaacaa acaaaaagca gctgaaaaag tgcatcaact cctctttttc tgagaaacat
1381 ggagcagcgc acgcccaggc gatgccagtc tgtgtgccgt gatgccgcac tgtgttcccc
1441 atgacagtgg tccatcatcg tgcactcgtc atactcagaa gtccaaagtt cattcttctt
1501 taaagtagcc tctataactc tgtttatttt ataaatagta ttccttatgg ctgccactct
1561 tatttacctt taaataattt ctgaaattta accttttcag aatgcattgt tgaaacaaga
1621 taaagattgc cttttttgaa ttttttaaat tttgttttta aaagcatata ccaccttagt
1681 tcattcatgt atcctggtaa agcatcttaa tcagacttat ttttaattac tgaatatttc
1741 ttagacgttt tgggacagat tttatgtaat ctttataagt atgatttctg aagaaaagca
1801 aatgcattag tatgtttgcc ttaaacttgt agactaaacc aagtattgta aaataaacag
1861 cgataacagt gatagttttt aactctatgg tcattgtatc actctggaaa atgtggagta
1921 gctgtaataa atctactcct gtattat
//