LOCUS AF100772 8297 bp mRNA linear HUM 30-NOV-1999
DEFINITION Homo sapiens tenascin-M1 (TNM1) mRNA, complete cds.
ACCESSION AF100772
VERSION AF100772.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 8297)
AUTHORS Brandau,O., Schuster,V., Weiss,M., Hellebrand,H., Fink,F.M.,
Kreczy,A., Friedrich,W., Strahm,B., Niemeyer,C., Belohradsky,B.H.
and Meindl,A.
TITLE Epstein-Barr virus-negative boys with non-Hodgkin lymphoma are
mutated in the SH2D1A gene, as are patients with X-linked
lymphoproliferative disease (XLP)
JOURNAL Hum. Mol. Genet. 8 (13), 2407-2413 (1999)
PUBMED 10556288
REFERENCE 2 (bases 1 to 8297)
AUTHORS Brandau,O., Oohashi,T., Faessler,R. and Meindl,A.
TITLE Direct Submission
JOURNAL Submitted (22-OCT-1998) Medizinische Genetik, LMU-Muenchen,
Goethestr. 29, Muenchen 80336, Germany
FEATURES Location/Qualifiers
source 1..8297
/db_xref="H-InvDB:HIT000068626"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="X"
/map="Xq24-q25"
gene 1..8297
/gene="TNM1"
CDS 65..8242
/gene="TNM1"
/function="putative receptor molecule"
/codon_start=1
/product="tenascin-M1"
/protein_id="AAF04723.1"
/translation="MEQTDCKPYQPLPKVKHEMDLAYTSSSDESEDGRKPRQSYNSRE
TLHEYNQELRMNYNSQSRKRKEVEKSTQEMEFCETSHTLCSGYQTDMHSVSRHGYQLE
MGSDVDTETEGAASPDHALRMWIRGMKSEHSSCLSSRANSALSLTDTDHERKSDGENG
FKFSPVCCDMEAQAGSTQDVQSSPHNQFTFRPLPPPPPPPHACTCARKPPPAADSLQR
RSMTTRSQPSPAAPAPPTSTQDSVHLHNSWVLNSNIPLETRHSLFKHGSGSSAIFSAA
SQNYPLTSNTVYSPPPRPLPRSTFSRPAFTFNKPYRCCNWKCTALSATAITVTLALLL
AYVIAVHLFGLTWQLQPVEGELYANGVSKGNRGTESMDTTYSPIGGKVSDKSEKKVFQ
KGRAIDTGEVDIGAQVMQTIPPGLFWRFQITIHHPIYLKFNISLAKDSLLGIYGRRNI
PPTHTQFDFVKLMDGKQLVKQDSKGSDDTQHSPRNLILTSLQETGFIEYMDQGPWYLA
FYNDGKKMEQVFVLTTAIEIMDDCSTNCNGNGECISGHCHCFPGFLGPDCARDSCPVL
CGGNGEYEKGHCVCRHGWKGPECDVPEEQCIDPTCFGHGTCIMGVCICVPGYKGEICE
EEDCLDPMCSNHGICVKGECHCSTGWGGVNCETPLPVCQEQCSGHGTFLLDAGVCSCD
PKWTGSDCSTELCTMECGSHGVCSRGICQCEEGWVGPTCEERSCHSHCTEHGQCKDGK
CECSPGWEGDHCTIAHYLDAVRDGCPGLCFGNGRCTLDQNGWHCVCQVGWSGTGCNVV
MEMLCGDNLDNDGDGLTDCVDPDCCQQSNCYISPLCQGSPDPLDLIQQSQTLFSQHTS
RLFYDRIKFLIGKDSTHVIPPEVSFDSRRACVIRGQVVAIDGTPLVGVNVSFLHHSDY
GFTISRQDGSFDLVAIGGISVILIFDRSPFLPEKRTLWLPWNQFIVVEKVTMQRVVSD
PPSCDISNFISPNPIVLPSPLTSFGGSCPERGTIVPELQVVQEEIPIPSSFVRLSYLS
SRTPGYKTLLRILLTHSTIPVGMIKVHLTVAVEGRLTQKWFPAAINLVYTFAWNKTDI
YGQKVWGLAEALVSVGYEYETCPDFILWEQRTVVLQGFEMDASNLGDWSLNKHHILNP
QSGIIHKGNGENMFISQQPPVISTIMGNGHQRSVACTNCNGPAHNNKLFAPVALASGP
DGSVYVGDFNFVRRIFPSGNSVSILELSTSPAHKYYLAMDPVSESLYLSDTNTRKVYK
LKSLVETKDLSKNFEVVAGTGDQCLPFDQSHCGDGGRASEASLNSPRGITVDRHGFIY
FVDGTMIRKIDENAVITTVIGSNGLTSTQPLSCDSGMDITQVRLEWPTDLAVNPMDNS
LYVLDNNIVLQISENRRVRIIAGRPIHCQVPGIDHFLVSKVAIHSTLESARAISVSHS
GLLFIAETDERKVNRIQQVTTNGEIYIIAGAPTDCDCKIDPNCDCFSGDGGYAKDAKM
KAPSSLAVSPDGTLYVADLGNVRIRTISRNQAHLNDMNIYEIASPADQELYQFTVNGT
HLHTLNLITRDYVYNFTYNSEGDLGAITSSNGNSVHIRRDAGGMPLWLVVPGGQVYWL
TISSNGVLKRVSAQGYNPALMTYPGNTGLLATKSNENGWTTVYEYDPEGHLTNATFPT
GEVSSFHSDLEKLTKVELDTSNRENVLMSTNLTATSTIYILKQENTQSTYRVNPDGSL
RVTFASGMEIGLSSEPHILAGAVNPTLGKCNISLPGEHNANLIEWRQRKEQNKGNVSA
FERRLRAHNRNLLSIDFDHITRTGKIYDDHRKFTLRILYDQTGRPILWSPVSRYNEVN
ITYSPSGLVTFIQRGTWNEKMEYDQSGKIISRTWADGKIWSYTYLEKSVMLLLHSQRR
YIFEYDQSDCLLSVTMPSMVRHSLQTMLSVGYYRNIYTPPDSSTSFIQDYSRDGRLLQ
TLHLGTGRRVLYKYTKQARLSEVLYDTTQVTLTYEESSGVIKTIHLMHDGFICTIRYR
QTGPLIGRQIFRFSEEGLVNARFDYSYNNFRVTSMQAVINETPLPIDLYRYVDVSGRT
EQFGKFSVINYDLNQVITTTVMKHTKIFSANGQVIEVQYEILKAIAYWMTIQYDNVGR
HGNMCIRVGVDANITRYFYEYDADGQLQTVSVNDKTQWRYSYDLNGDINLLSHGKSAR
LTPLRYDLRDRITRLGEIQYKMDEDGFLRQRGNDIFEYNSNGLLQKAYNKASGWTVQY
YYDGLGRRVASKSSLGQHLQFFVDATANPIRVTHLYNHTSSEITSLYYDLQGHLIAME
LSSGEEYYVACDNTGTPLAVFSSRGQVIKEILYTPYGDIYHDTYPDFQVIIGFHGGLY
DFLTKLVHLGQRDYDVVAGRWTTAYHHIWKQLNLLPKPFNLYSFENNYPVGKIQDVAK
YTTDIRSWLELFGFQLHNVLPGFPKPELENLELTYELLRLQTKTQEWDPGKTILGIQC
ELQKQLRNFISLDQLPMTPRYNDGRCLEGGKQPRFAAVPSVFGKGIKFAIKDGIVTAD
IIGVANEDSRRLAAILNNAHYLENLHFTIEGRDTHYFIKLGSLEEDLVLIGNTGGRRI
LENGVNVTVSQMTSLLNGRTRRFADIQLQHGALCFNIRYGTTVEEEKNHVLEIARQRA
VAQAWTKEQRRLQEGEEGIRAWTEGEKQQLLSTGRVQGYDGYFVLSVEQYLELSDSAN
NIHFMRQSEIGRR"
BASE COUNT 2335 a 1907 c 1981 g 2074 t
ORIGIN
1 gactgcttgc attaaaggac ttcctcatcc tttttttcat gaaactgagc ttgcttaatc
61 agagatggag caaactgact gcaaacccta ccagcctcta ccaaaagtca agcatgaaat
121 ggatctagct tacaccagtt cttctgatga gagtgaagat ggaagaaaac caagacagtc
181 atacaactcc agggagaccc tgcacgagta taaccaggag ctgaggatga attacaatag
241 ccagagtaga aagaggaaag aagtagaaaa atctactcaa gagatggaat tctgtgaaac
301 ctctcacact ctgtgctctg gctaccaaac agacatgcac agcgtttctc ggcatggcta
361 ccagctagag atgggatctg atgtggacac agagacagaa ggtgctgcct cacctgacca
421 tgcactaaga atgtggataa ggggaatgaa atcagagcat agttcctgtt tgtccagccg
481 ggccaactct gcattatcct tgactgacac tgaccatgaa aggaagtctg atggggaaaa
541 tggtttcaaa ttctctcctg tttgttgtga catggaggct caagctgggt ctactcaaga
601 tgtgcagagc agcccacaca accagttcac cttcagaccc ctcccaccgc cacctccgcc
661 tcctcatgcc tgcacctgtg ccaggaagcc accccctgca gcggactctc ttcagaggag
721 atcaatgact acccgcagcc agcccagccc agctgctcca gctcccccaa ccagcacgca
781 ggattcagtc catctgcata acagctgggt cctgaacagc aacataccat tggagaccag
841 gcattccctg ttcaaacatg gatctggttc ctctgcgatc ttcagtgcag ccagtcagaa
901 ctaccctctg acatccaata ccgtgtactc gccccctccc aggcctcttc ctcgaagcac
961 cttttcccga cctgccttta cctttaacaa accttacagg tgctgcaact ggaagtgcac
1021 agcattgagc gccactgcaa tcacagtgac tttggccttg ttactagcct atgtgattgc
1081 agtgcatttg ttcggcctga cttggcagtt gcaaccagtt gaaggagagc tgtatgcaaa
1141 tggagttagc aaagggaaca gggggaccga gtccatggac actacttact ctccaattgg
1201 aggaaaagtt tctgataaat cagagaaaaa agtgtttcag aagggacggg cgatagacac
1261 tggagaagtt gacattggtg cacaggtcat gcagaccatt ccacctggtt tattctggcg
1321 tttccagatt actatccacc atccaatata tctgaagttc aatatttctt tagccaagga
1381 ctctctgctg ggaatttatg gcagaagaaa cattccacct acacatactc agtttgattt
1441 tgtaaaacta atggatggca aacagctggt caagcaggac tccaagggct ctgatgatac
1501 acagcactcc cctcggaacc tgatcttaac ttcgcttcag gagacaggtt tcatagagta
1561 tatggatcaa ggaccttggt atctggcgtt ttacaatgat ggaaaaaaga tggagcaagt
1621 attcgtgtta actacagcaa ttgaaataat ggatgactgt tcaaccaatt gcaatggaaa
1681 tggagagtgt atctctggcc attgtcattg tttcccagga ttccttggac ctgactgtgc
1741 tagagattcc tgccctgtgc tgtgtggtgg gaatggagaa tacgagaaag gacactgtgt
1801 ctgccggcat ggctggaagg ggccagagtg tgacgttccg gaagaacaat gcattgatcc
1861 aacatgcttt ggccacggca cctgcatcat gggagtctgc atctgtgtgc caggatacaa
1921 aggagaaata tgcgaggaag aggactgcct agacccaatg tgttccaacc atggcatctg
1981 tgtaaaagga gaatgtcact gttctactgg ctggggagga gttaactgtg aaacaccact
2041 tcctgtatgt caagagcagt gctcaggaca cggaactttt cttctggacg ctggagtatg
2101 cagctgtgat cccaagtgga caggatctga ctgctcaaca gagctgtgta ccatggagtg
2161 tggtagccat ggagtctgct caagaggaat ttgccagtgt gaagaaggct gggtaggacc
2221 aacatgtgag gaacgctcct gtcattctca ttgtactgag catggccaat gcaaagatgg
2281 aaaatgtgag tgtagccctg gatgggaggg cgaccactgc acaattgctc actacttaga
2341 tgctgtccga gatggctgcc cagggctctg ctttggaaat ggacgatgta ccctggatca
2401 aaatggttgg cactgtgtgt gtcaggtggg ttggagtggg acaggctgca atgttgtcat
2461 ggaaatgctt tgtggagata acttggacaa tgatggagat ggtttaaccg actgtgtgga
2521 tcctgactgt tgtcaacaaa gcaactgtta tataagtcct ctctgccagg gctcaccaga
2581 tcctcttgac ctcattcagc aaagccaaac tctcttctct cagcacactt caagactttt
2641 ttatgatcga atcaaattcc tcattggcaa ggacagtact catgtcattc ctcctgaggt
2701 gtcatttgac agcaggcgtg cctgtgtgat tcgaggccaa gtggtggcca tagatggaac
2761 tcctctagtg ggagtgaatg tcagtttctt gcaccacagt gattatgggt ttaccatcag
2821 ccggcaagat ggaagctttg acctcgtggc catcggtggc atctctgtca tcttaatctt
2881 cgaccgatcc cctttcctgc ctgagaagag aacactctgg ttgccttgga atcagtttat
2941 tgtggtagag aaagtcacca tgcagagagt tgtatcagac ccgccatcct gcgatatctc
3001 caactttatc agcccaaacc ctattgtgct tccttcaccg ctcacatcat ttggagggtc
3061 ctgtccagag aggggaacta ttgttcctga gctgcaggtt gtacaggagg aaattcccat
3121 tccctccagc tttgtgaggc tgagttacct gagcagccgc acccctgggt ataaaaccct
3181 gctacggatc cttctgacac attcaacgat tcccgtaggc atgataaaag tacacctcac
3241 agtagctgtg gaagggcgac tcacacagaa gtggtttccc gccgcaatta atcttgtcta
3301 cacatttgct tggaacaaga ccgatatcta tggacagaag gtttggggcc tggcagaggc
3361 tttggtatct gtgggatatg aatatgaaac gtgccctgac tttattctct gggagcaaag
3421 gacagtcgtt ttacaaggtt ttgagatgga tgcttctaac ctaggagact ggtctttgaa
3481 taagcatcac attttgaatc ctcaaagtgg aatcatacat aaagggaatg gagaaaatat
3541 gttcatttcc cagcagcccc cagtcatatc aaccataatg ggtaatggac accaaaggag
3601 tgtagcctgc accaactgca atggcccagc ccacaacaac aaactctttg ctcctgtcgc
3661 cttagcttct ggccctgatg gcagtgtgta tgttggcgac ttcaattttg taaggagaat
3721 atttccctcg ggaaactccg ttagtatttt ggaattaagc acaagtcctg ctcacaaata
3781 ctatctggct atggaccctg tgtctgaatc actctatcta tcagacacca atactcgcaa
3841 agtctacaag ttgaaatctc ttgtggagac gaaagatctg tccaagaatt ttgaagtggt
3901 ggcaggaact ggtgatcagt gccttccctt tgaccagagt cattgtggag atggtgggag
3961 agcatcggaa gcttcactga atagccctcg aggcatcaca gttgataggc atggatttat
4021 ttactttgtg gatgggacta tgattcgcaa aattgatgag aatgctgtga tcacaactgt
4081 aatcggctca aatggtctga cttccacaca accactgagc tgtgactcag gaatggacat
4141 cactcaggtg cgattagagt ggccaacaga ccttgcagta aatcctatgg acaattcatt
4201 gtatgtcttg gataacaaca ttgtgctgca aatttctgag aacaggcgtg ttcggatcat
4261 cgcaggacgc cccattcact gccaggtgcc aggcatcgat catttcctgg tcagcaaggt
4321 agcaattcac tccactctag agtcagcgag ggccatcagt gtctcccaca gcgggctgct
4381 cttcatagct gaaacagacg agaggaaagt aaaccgcatt cagcaagtaa ccaccaatgg
4441 ggagatctac atcatcgctg gtgcccccac tgactgtgac tgcaaaattg atccaaactg
4501 tgactgtttt tcaggtgatg gtggctatgc caaagatgca aagatgaaag ccccttcctc
4561 cttagcagtg tcgcctgatg gaaccctcta tgtggcagac ctcggaaatg ttcgaattcg
4621 taccatcagc aggaaccaag cccacctgaa tgacatgaac atttatgaga ttgcttcacc
4681 cgctgatcag gaactgtacc agttcactgt aaatggaacc cacctacaca ccctgaactt
4741 gataacaagg gactatgttt ataacttcac ctacaattct gaaggtgact tgggcgcgat
4801 taccagcagc aatggcaatt cagtgcacat tcgccgtgat gcaggcggaa tgccgctatg
4861 gcttgtggtg cctggcggac aagtatactg gctgactata agcagcaatg gagtcctgaa
4921 aagagtgtca gcccaaggct ataatccggc cttaatgacc tatccaggaa acacagggct
4981 tctggctacc aaaagtaacg aaaatggatg gacaaccgtt tatgagtatg accccgaggg
5041 acacctgacc aatgcaacgt ttcccactgg agaggtcagc agcttccaca gtgacctgga
5101 gaagctgaca aaagtggagc tagatacttc caaccgtgaa aatgtcctca tgtcaaccaa
5161 cttgacggca actagtacca tatatatttt aaaacaagaa aatactcaaa gtacctatcg
5221 ggtgaatcca gatggttccc tgcgtgtcac ttttgccagc gggatggaga tcggcctcag
5281 ctcagagccc cacatcctgg caggggcagt caaccctacc ctgggcaaat gcaacatctc
5341 attgcccgga gagcacaatg caaacctcat cgagtggcgg cagaggaagg agcaaaacaa
5401 aggcaatgtt tcggcttttg aaaggaggct gagggcccac aacagaaacc tactctccat
5461 agattttgat catataaccc gcacaggaaa gatctatgat gaccatcgaa aattcaccct
5521 tcgaattctt tatgaccaga ctgggcgacc cattctgtgg tctcctgtaa gcagatataa
5581 tgaagtgaac atcacatatt caccttcggg attggtgacg tttattcaaa gaggaacgtg
5641 gaatgaaaaa atggaatatg accagagtgg gaaaattatt tcaagaactt gggctgatgg
5701 gaaaatttgg agctatacct acttagaaaa atctgtgatg cttctcctac acagccagcg
5761 gcgttacatc tttgagtatg accaatcaga ttgcctgctg tcagttacca tgcctagcat
5821 ggtgcgccac agcttacaaa ccatgctttc agtgggctac taccgtaata tctacacccc
5881 accggacagt agcacttctt ttatccaaga ctatagtcga gatggccgat tgctacagac
5941 cctgcatctg gggacagggc gcagagtctt atacaagtac accaagcaag caaggctttc
6001 tgaggttctc tatgatacca ctcaggtcac attaacatat gaagagtctt ctggagtgat
6061 taagacaata cacctgatgc atgacggatt catctgcaca atcagataca ggcaaacagg
6121 acctcttatt ggacgccaga ttttcagatt cagtgaagaa ggccttgtga atgcacggtt
6181 cgactacagc tacaacaatt tccgagtcac aagcatgcaa gctgtaatca atgaaacccc
6241 tttgcctata gatctttacc gatatgttga tgtctctggc agaacagagc agtttggaaa
6301 attcagtgta attaattacg atttaaatca ggtcataact actacagtga tgaaacacac
6361 caaaatcttc agtgccaatg gacaagtcat tgaagtccaa tatgaaatcc taaaggcaat
6421 tgcctactgg atgaccattc aatatgataa tgtgggccga catggtaata tgtgcataag
6481 ggtaggagta gatgccaata taacaaggta cttctatgaa tacgatgctg atgggcaact
6541 tcagactgtt tctgtaaatg acaaaaccca gtggcgttat agttacgatc tgaatggaga
6601 catcaacctc ttaagccatg ggaagagtgc tcgtcttact cctctccgat atgacctccg
6661 agaccgcatc accagattag gagaaattca gtataaaatg gatgaagatg gctttctgag
6721 gcagagggga aatgatattt ttgaatataa ttctaatggc ctgctgcaga aagcctacaa
6781 taaggcttct ggctggactg tgcagtatta ctatgatggg cttgggcgac gtgtcgcgag
6841 taagtccagc ctagggcagc accttcagtt ctttgtcgac gcgaccgcga accccataag
6901 agttactcat ttgtacaacc acacaagctc ggagattaca tctctgtatt atgatctcca
6961 aggtcacctt attgccatgg agttaagcag tggtgaagaa tattatgtag cctgtgataa
7021 tacaggtacc ccactagctg tgttcagcag ccgaggtcag gtcataaagg agatactata
7081 cacaccttat ggcgatatct atcatgacac ttaccctgac tttcaggtca taattggttt
7141 tcatggagga ctctatgatt tccttactaa attagtgcac ctggggcaaa gggattatga
7201 tgttgttgct ggcagatgga caacggccta tcatcacata tggaaacagt tgaacctcct
7261 tcctaaacca ttcaacctct actcctttga aaataactac ccagttggca aaattcaaga
7321 tgttgcaaag tataccacag acatcagaag ttggttggag ctatttggtt tccaattaca
7381 caatgtacta cctggatttc ccaaacctga attagaaaat ttagaattaa cttacgagct
7441 tctacggctt cagacaaaaa ctcaagagtg ggatcctgga aagactatcc tgggcattca
7501 gtgtgaactc cagaaacagc tcaggaattt catttccttg gaccaactac ctatgactcc
7561 ccgatacaat gatggacggt gccttgaagg agggaagcaa ccaaggtttg ctgctgtccc
7621 ttctgttttt gggaaaggta taaaatttgc catcaaggat ggcatagtaa cagctgatat
7681 tataggagta gccaatgaag atagcaggcg gcttgctgcc attctcaata atgcccatta
7741 cctggaaaac ctacatttta ccatagaggg gagggacact cactacttca ttaagcttgg
7801 gtctctggag gaagacctgg tgctcatcgg taacactggg gggaggcgga ttctggagaa
7861 tggtgtcaat gtcactgtgt cccagatgac ttctctgttg aatgggagga ctagacggtt
7921 tgcagatatt cagctccagc atggagccct gtgcttcaac atccggtatg ggacaactgt
7981 cgaagaggaa aagaatcacg tgttggagat tgccagacag cgcgcagtgg cccaggcctg
8041 gactaaggaa caaagaaggc tgcaagaggg ggaagagggg attagggcat ggacagaagg
8101 ggaaaagcag cagcttttga gcactgggcg ggtacaaggt tacgatgggt attttgtttt
8161 gtctgttgag cagtatttag aactttctga cagtgccaat aatattcact ttatgagaca
8221 gagcgaaata ggcaggaggt aacaaaaata tctctgcctt tgcgtcacca aagactgcct
8281 gtttttaaaa cataaaa
//