LOCUS AF089088 2620 bp mRNA linear HUM 23-JAN-2001 DEFINITION Homo sapiens calpain-like protease CAPN10a mRNA, complete cds. ACCESSION AF089088 VERSION AF089088.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2620) AUTHORS Horikawa,Y., Oda,N., Cox,N.J., Li,X., Orho-Melander,M., Hara,M., Hinokio,Y., Lindner,T.H., Mashima,H., Schwarz,P.E., del Bosque-Plata,L., Horikawa,Y., Oda,Y., Yoshiuchi,I., Colilla,S., Polonsky,K.S., Wei,S., Concannon,P., Iwasaki,N., Schulze,J., Baier,L.J., Bogardus,C., Groop,L., Boerwinkle,E., Hanis,C.L. and Bell,G.I. TITLE Genetic variation in the gene encoding calpain-10 is associated with type 2 diabetes mellitus JOURNAL Nat. Genet. 26 (2), 163-175 (2000) PUBMED 11017071 REFERENCE 2 (bases 1 to 2620) AUTHORS Horikawa,Y. and Bell,G.I. TITLE Direct Submission JOURNAL Submitted (02-SEP-1998) Howard Hughes Medical Institute, The University of Chicago, 5841 S. Maryland Avenue, MC1028, Chicago, IL 60637, USA FEATURES Location/Qualifiers source 1..2620 /db_xref="H-InvDB:HIT000068148" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" CDS 178..2196 /note="type A" /codon_start=1 /product="calpain-like protease CAPN10a" /protein_id="AAG17966.1" /translation="MRAGRGATPARELFRDAAFPAADSSLFCDLSTPLAQFREDITWR RPQEICATPRLFPDDPREGQVKQGLLGDCWFLCACAALQKSRHLLDQVIPPGQPSWAD QEYRGSFTCRIWQFGRWVEVTTDDRLPCLAGRLCFSRCQREDVFWLPLLEKVYAKVHG SYEHLWAGQVADALVDLTGGLAERWNLKGVAGSGGQQDRPGRWEHRTCRQLLHLKDQC LISCCVLSPRAGARELGEFHAFIVSDLRELQGQAGQCILLLRIQNPWGRRCWQGLWRE GGEGWSQVDAAVASELLSQLQEGEFWVEEEEFLREFDELTVGYPVTEAGHLQSLYTER LLCHTRALPGAWVKGQSAGGCRNNSGFPSNPKFWLRVSEPSEVYIAVLQRSRLHAADW AGRARALVGDSHTSWSPASIPGKHYQAVGLHLWKVEKRRVNLPRVLSMPPVAGTACHA YDREVHLRCELSPGYYLAVPSTFLKDAPGEFLLRVFSTGRVSLSAIRAVAKNTTPGAA LPAGEWGTVQLRGSWRVGQTAGGSRNFASYPTNPCFPFSVPEGPGPRCVRITLHQHCR PSDTEFHPIGFHIFQVPEGGRSQDAPPLLLQEPLLSCVPHRYAQEVSRLCLLPAGTYK VVPSTYLPDTEGAFTVTIATRIDRPSIHSQEMLGQFLQEVSVMAVMKT" regulatory 2594..2599 /regulatory_class="polyA_signal_sequence" BASE COUNT 448 a 819 c 899 g 454 t ORIGIN 1 gactagcggg ccggcgtact ggcctggtcc agcacctgcg gggccctcgg gcttggaggg 61 ctgggccggg cggggaacgg gcggggcggg ccggaggcgg cggcggctga ctcgccttct 121 ctccggggct gcgaccccga ggcaaccggc tgcagatggg agcccgcgga gccgaggatg 181 cgggcgggcc ggggcgcgac gccggcgagg gagctgttcc gggacgccgc cttccccgcc 241 gcggactcct cgctcttctg cgacttgtct acgccgctgg cccagttccg cgaggacatc 301 acgtggaggc ggccccagga gatttgtgcc acaccccggc tgtttccaga tgacccacgg 361 gaagggcagg tgaagcaggg gctgctgggg gattgctggt tcctgtgtgc ctgcgccgcg 421 ctgcagaaga gcaggcacct cctggaccag gtcattcctc cgggacagcc gagctgggcc 481 gaccaggagt accggggctc cttcacctgt cgcatttggc agtttggacg ctgggtggag 541 gtgaccacag atgaccgcct gccgtgcctt gcagggagac tctgtttctc ccgctgccag 601 agggaggatg tgttctggct ccccttactg gaaaaggtct acgccaaggt ccatgggtcc 661 tacgagcacc tgtgggccgg gcaggtggcg gatgccctgg tggacctgac cggcggcctg 721 gcagaaagat ggaacctgaa gggcgtagca ggaagcggag gccagcagga caggccaggc 781 cgctgggagc acaggacttg tcggcagctg ctccacctga aggaccagtg tctgatcagc 841 tgctgcgtgc tcagccccag agcaggtgcc cgggagctgg gggagttcca tgccttcatt 901 gtctcggacc tgcgggagct ccagggtcag gcgggccagt gcatcctgct gctgcggatc 961 cagaacccct ggggccggcg gtgctggcag gggctctgga gagagggggg tgaagggtgg 1021 agccaggtag atgcagcggt agcatctgag ctcctgtccc agctccagga aggggagttc 1081 tgggtggagg aggaggagtt cctcagggag tttgacgagc tcaccgttgg ctacccggtc 1141 acggaggccg gccacctgca gagcctctac acagagaggc tgctctgcca tacgcgggcg 1201 ctgcctgggg cctgggtcaa gggccagtca gcaggaggct gccggaacaa cagcggcttt 1261 cccagcaacc ccaaattctg gctgcgggtc tcagaaccga gtgaggtgta cattgccgtc 1321 ctgcagagat ccaggctgca cgcggcggac tgggcaggcc gggcccgggc actggtgggt 1381 gacagtcata cttcgtggag cccagcgagc atcccgggca agcactacca ggctgtgggt 1441 ctgcacctct ggaaggtaga gaagcggcgg gtcaatctgc ctagggtcct gtccatgccc 1501 cccgtggctg gcaccgcgtg ccatgcatac gaccgggagg tccacctgcg ttgtgagctc 1561 tcaccgggct actacctggc tgtccccagc accttcctga aggacgcgcc aggggagttc 1621 ctgctccgag tcttctctac cgggcgagtc tcccttagcg ccatcagggc agtggccaag 1681 aacaccaccc ccggggcagc cctgcctgcg ggggagtggg ggaccgtgca gctacggggt 1741 tcttggagag tcggccagac ggcggggggc agcaggaact ttgcctcata ccccaccaac 1801 ccctgcttcc ccttctcggt ccccgagggc cctggccccc gctgcgtccg catcactctg 1861 catcagcact gccggcccag tgacaccgag ttccacccca tcggcttcca tatcttccag 1921 gtcccagagg gtggaaggag ccaggacgca cccccactgc tgctgcagga gccgctgctg 1981 agctgcgtgc cacatcgcta cgcccaggag gtgagccggc tctgcctcct gcctgcaggc 2041 acctacaagg ttgtgccctc cacctacctg ccggacacag agggggcctt cacagtgacc 2101 atcgcaacca ggattgacag gccatccatt cacagccagg agatgctggg ccagttcctc 2161 caagaggtct ccgtcatggc agtgatgaaa acctaacagg gtggccccct gtgccagctc 2221 aggtgactgg agcccgaggg cctgacaggt tcccagcagc tgggccggcc agccttgcac 2281 tgtgggggct ggtcctgagt cttggcctgc ctcccagccc tgccaggggg ctgcggccta 2341 ggggtccacg ggaagcctcc gtcaggagag acgcagccct gggggccagc tggtgctgca 2401 aggaagggtg ggaagcttgc tggcttctgt tgcgccactg agacggcaga gaccccagga 2461 tcccagagct tcccaggatc cctcccagat cctctgctga ctccatatgg aggcctcaca 2521 cccagagggt agggcagcag atcttcttta taactattta ttgttcgaat cacttttagg 2581 atgtaacttt ataaataaac atgagcgctg atgatttgca //