LOCUS AF080561 2766 bp mRNA linear HUM 27-DEC-2005 DEFINITION Homo sapiens SYT interacting protein SIP mRNA, complete cds. ACCESSION AF080561 VERSION AF080561.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2766) AUTHORS Perani,M., Antonson,P., Hamoudi,R., Ingram,C.J., Cooper,C.S., Garrett,M.D. and Goodwin,G.H. TITLE The proto-oncoprotein SYT interacts with SYT-interacting protein/co-activator activator (SIP/CoAA), a human nuclear receptor co-activator with similarity to EWS and TLS/FUS family of proteins JOURNAL J. Biol. Chem. 280 (52), 42863-42876 (2005) PUBMED 16227627 REFERENCE 2 (bases 1 to 2766) AUTHORS Antonson,P. and Goodwin,G. TITLE SIP, a novel protein interacting with SYT JOURNAL Unpublished REFERENCE 3 (bases 1 to 2766) AUTHORS Antonson,P. and Goodwin,G. TITLE Direct Submission JOURNAL Submitted (27-JUL-1998) Molecular Carcinogenesis, Institute of Cancer Research, 15 Cotswold Road, Sutton, Surrey SM2 5NG, UK FEATURES Location/Qualifiers source 1..2766 /db_xref="H-InvDB:HIT000066452" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /cell_line="SS254" /tissue_type="synovial sarcoma" CDS 81..2090 /codon_start=1 /product="SYT interacting protein SIP" /protein_id="AAC64058.1" /translation="MKIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRE NAGALRAIEALHGHELRPGRALVVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERR GRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGKRINVELSTKGQKKGPGLAVQ SGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDGQARQPTPPFFGRDRSPLR RSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGVGYRTQPMTAQAASYRAQ PSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGGQAAAASSLNSYGAQ GSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQAASYGAQSAASS LAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATAAAYASQPAAYA AQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATGSYGAAAAYGAQP SATLAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGNAYDGAGQPSAAYLSMSQGAV ANANSTPPPYERTRLSPPRASYDDPYKKAVAMSKRYGSDRRLAELSDYRRLSESQLSF RRSPTKSSLDYRRLPDAHSDYARYSGSYNDYLRAAQMHSGYQRRM" misc_feature 84..299 /note="encodes RNA binding domain RRM1" misc_feature 318..489 /note="encodes RNA binding domain RRM2" misc_feature 753..1649 /note="encodes repeating amino acids" regulatory 2734..2739 /regulatory_class="polyA_signal_sequence" BASE COUNT 505 a 884 c 748 g 629 t ORIGIN 1 gactgccggt cgttcggacg tcttgcctgt cgcgtggagg agaggtccgg gctctccagg 61 aaggtggctg cggcgacaaa atgaagatat tcgtgggcaa cgtcgacggg gcggatacga 121 ctccggagga gctggcagcc ctctttgcgc cctacggcac ggtcatgagc tgcgccgtca 181 tgaaacagtt cgccttcgtg cacatgcgcg agaacgcggg cgcgctgcgc gccatcgaag 241 ccctgcacgg ccacgagctg cggccggggc gcgcgctcgt ggtggaaatg tcgcgcccaa 301 ggcctcttaa tacttggaag attttcgtgg gcaatgtgtc ggctgcatgc acgagccagg 361 aactgcgcag cctcttcgag cgccgcggac gcgtcatcga gtgtgacgtg gtgaaagact 421 acgcgtttgt tcacatggag aaggaagcag atgccaaagc cgcaatcgcg cagctcaacg 481 gcaaagaagt gaagggcaag cgcatcaacg tggaactctc caccaagggt cagaagaagg 541 ggcctggcct ggctgtccag tctggggaca agaccaagaa accaggggct ggggatacgg 601 ccttccctgg aactggtggc ttctctgcca ccttcgacta ccagcaggct tttggcaaca 661 gcactggtgg ctttgatggg caagcccgtc agcccacacc acccttcttt ggtcgcgacc 721 gcagccctct gcgccgttca cctccccgag cctcttatgt ggctcctctg acggcccagc 781 cagctaccta ccgggcccag ccgtccgtgt cactgggagc tgcctacagg gcccagcctt 841 ctgcctcttt gggtgttggc tatcggactc agcccatgac agcccaggca gcctcttacc 901 gcgctcagcc ctctgtctcc cttggggcac catacagggg ccagctggct agtcctagct 961 cccagtctgc tgcagcttct tcactcggcc catatggtgg agcccagccc tcagcctcgg 1021 ccctttcctc ctatgggggt caggcagctg cagcttcttc gctcaactcc tatggggctc 1081 agggttcctc ccttgcctcc tatggtaacc agccatcctc ttacggcgcc caggctgcct 1141 cttcctatgg ggttcgtgca gctgcttctt cctacaacac ccagggagca gcttcctcct 1201 taggctccta cggggctcag gcagcctcct atggggccca gtctgcagcc tcctcactag 1261 cttatggagc ccaggcagct tcatataatg cccagccctc ggcctcttac aatgcccagt 1321 ctgccccata tgctgcacag caggctgctt cctactcttc ccaacctgct gcctatgtgg 1381 cacagccagc cacagctgct gcctatgcca gccagccagc agcctacgcc gcacaagcca 1441 ctaccccaat ggctggctcc tatggggccc agccggttgt gcagacccag ctgaatagtt 1501 acggggccca agcatcaatg ggcctttcag gctcctatgg ggctcagtcg gctgctgcgg 1561 ccactggctc ctatggtgcc gcagcagcct acggggccca accttctgcc actctggcag 1621 ctccttaccg cactcagtca tcagcctcat tggctgcttc ctatgctgcc cagcagcatc 1681 cccaggctgc tgcctcctac cgcggccagc caggcaatgc ctacgatggg gcaggtcagc 1741 cgtctgcagc ctacctgtcc atgtcccagg gggccgttgc caacgccaac agcaccccgc 1801 cgccctatga gcgtacccgc ctctccccac cccgggccag ctacgacgat ccctacaaaa 1861 aggctgtcgc catgtcgaaa aggtatggtt ccgaccggcg tttagccgag ctctctgatt 1921 accgccgttt atcagagtcg cagctttcgt tccgccgctc gccgacaaag tcctcgctgg 1981 attaccgtcg cctgcccgat gcccattccg attacgcacg ctattcgggc tcctataatg 2041 attacctgcg ggcggctcag atgcactctg gctaccagcg ccgcatgtag ggccatcctg 2101 ggatggggca ccacagggag ggagggagaa aagaggtggg tagggttaca gatccaggtt 2161 ataactactc tggcccatac ctttcctggt tgtggttttt catgccctct accatgtggg 2221 ccttccccag gagatgatcc tgttaagtgt tcggcagtaa cctactttgt tccttcgcct 2281 cagcagcaaa tcttgctact ggctctagat ctgcggtttc ccctctaccc tgcctcctgt 2341 ctccccagaa tgggaatttc ttttatgttt ttattttttt cctggctccc ttttattttt 2401 gtgcgcgata tttaaggtcg tctggatggg gaagcaacct gcagctgagg tcgccggcgc 2461 ctttttcttt ttagatggga aggaggccag gaaagggtca gcttaaccat ttcctatgtg 2521 ccaagctgtg ccagcagtcc agggtaccct gactgtccct ctgtagactg ttgagactga 2581 gttcctgttg ggacagtcag ttggtatgta tccaagtccc tgctgaccac taatgttcta 2641 gctgatggtg agcggcacag tcccacttcc ccatctcccc aagtaggtgg tgttagaaaa 2701 ccttaatttt ttttcccttt tgtatggact acaaataaaa cttggggcaa tttgcagttt 2761 ggaaaa //