LOCUS AF055636 2254 bp mRNA linear HUM 01-JAN-1999 DEFINITION Homo sapiens leucine-rich glioma-inactivated protein precursor (LGI1) mRNA, complete cds. ACCESSION AF055636 VERSION AF055636.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2254) AUTHORS Chernova,O.B., Somerville,R.P. and Cowell,J.K. TITLE A novel gene, LGI1, from 10q24 is rearranged and downregulated in malignant brain tumors JOURNAL Oncogene 17 (22), 2873-2881 (1998) PUBMED 9879993 REFERENCE 2 (bases 1 to 2254) AUTHORS Chernova,O.B. and Cowell,J.K. TITLE Direct Submission JOURNAL Submitted (24-MAR-1998) Neurosciences, Cleveland Clinic Foundation, 9500 Euclid Ave, Cleveland, OH 44195, USA FEATURES Location/Qualifiers source 1..2254 /db_xref="H-InvDB:HIT000064667" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="10" /map="10q24" /tissue_type="brain" /dev_stage="fetus" gene 1..2254 /gene="LGI1" CDS 225..1898 /gene="LGI1" /codon_start=1 /product="leucine-rich glioma-inactivated protein precursor" /protein_id="AAC99316.1" /translation="MESERSKRMGNACIPLKRIAYFLCLLSALLLTEGKKPAKPKCPA VCTCTKDNALCENARSIPRTVPPDVISLSFVRSGFTEISEGSFLFTPSLQLLLFTSNS FDVISDDAFIGLPHLEYLFIENNNIKSISRHTFRGLKSLIHLSLANNNLQTLPKDIFK GLDSLTNVDLRGNSFNCDCKLKWLVEWLGHTNATVEDIYCEGPPEYKKRKINSLSSKD FDCIITEFAKSQDLPYQSLSIDTFSYLNDEYVVIAQPFTGKCIFLEWDHVEKTFRNYD NITGTSTVVCKPIVIETQLYVIVAQLFGGSHIYKRDSFANKFIKIQDIEILKIRKPND IETFKIENNWYFVVADSSKAGFTTIYKWNGNGFYSHQSLHAWYRDTDVEYLEIVRTPQ TLRTPHLILSSSSQRPVIYQWNKATQLFTNQTDIPNMEDVYAVKHFSVKGDVYICLTR FIGDSKVMKWGGSSFQDIQRMPSRGSMVFQPLQINNYQYAILGSDYSFTQVYNWDAEK AKFVKFQELNVQAPRSFTHVSINKRNFLFASSFKGNTQIYKHVIVDLSA" sig_peptide 225..326 /gene="LGI1" mat_peptide 327..1895 /gene="LGI1" /product="leucine-rich glioma-inactivated protein" misc_feature 498..569 /gene="LGI1" /note="predicted to encode Leucine-rich repeat 1; LPR1" misc_feature 570..641 /gene="LGI1" /note="predicted to encode Leucine-rich repeat 2; LPR2" misc_feature 642..713 /gene="LGI1" /note="predicted to encode Leucine-rich repeat 3; LPR3" misc_feature 714..749 /gene="LGI1" /note="predicted to encode half of Leucine-rich repeat 4; LPR4" misc_feature 846..1151 /gene="LGI1" /note="predicted to encode putative transmembrane region" BASE COUNT 689 a 476 c 431 g 658 t ORIGIN 1 gatccctccc atctcacagt acctcacagg tctcttcccc cgagcagtgc attgctggag 61 cgaggagaag ctcacgaatc agctgcaggt ctctgttttg aaaaagcaga gatacagagg 121 cagaggaaag gggtggactc ctatgtgacc tgttcttaga gcaagacaat caccatctga 181 attccagaag ccctgttcat ggttggggat attttctcga ctgcatggaa tcagaaagaa 241 gcaaaaggat gggaaatgcc tgcattcccc tgaaaagaat tgcttatttc ctatgtctct 301 tatctgcgct tttgctgact gaggggaaga aaccagcgaa gccaaaatgc cctgccgtgt 361 gtacttgtac caaagataat gctttatgtg agaatgccag atccattcca cgcaccgttc 421 ctcctgatgt tatctcatta tcctttgtga gatctggttt tactgaaatc tcagaaggga 481 gttttttatt cacgccatcg ctgcagctct tgttattcac atcgaactcc tttgatgtga 541 tcagtgatga tgcttttatt ggtcttccac atctagagta tttattcata gaaaacaaca 601 acatcaagtc aatttcaaga catactttcc ggggactaaa gtcattaatt cacttgagcc 661 ttgcaaacaa caatctccag acactcccaa aagatatttt caaaggcctg gattctttaa 721 caaatgtgga cctgaggggt aattcattta attgtgactg taaactgaaa tggctagtgg 781 aatggcttgg ccacaccaat gcaactgttg aagacatcta ctgcgaaggc cccccagaat 841 acaagaagcg caaaatcaat agtctctcct cgaaggattt cgattgcatc attacagaat 901 ttgcaaagtc tcaagacctg ccttatcaat cattgtccat agacactttt tcttatttga 961 atgatgagta tgtagtcatc gctcagcctt ttactggaaa atgcattttc cttgaatggg 1021 accatgtgga aaagaccttc cggaattatg acaacattac aggcacatcc actgtagtat 1081 gcaagcctat agtcattgaa actcagctct atgttattgt ggcccagctg tttggtggct 1141 ctcacatcta taagcgagac agttttgcaa ataaattcat aaaaatccag gatattgaaa 1201 ttctcaaaat ccgaaaaccc aatgacattg aaacattcaa gattgaaaac aactggtact 1261 ttgttgttgc tgacagttca aaagctggtt ttactaccat ttacaaatgg aacggaaacg 1321 gattctactc ccatcaatcc ttacacgcgt ggtacaggga cactgatgtg gaatatctag 1381 aaatagtcag aacacctcag acactcagaa cgcctcattt aattctgtct agtagttccc 1441 agcgtcctgt aatttatcag tggaacaaag caacacaatt attcactaac caaactgaca 1501 ttcctaacat ggaggatgtg tacgcagtga agcacttctc agtgaaaggg gacgtgtaca 1561 tttgcttgac aagattcatt ggtgattcca aagtcatgaa atggggaggc tcctcgttcc 1621 aggatattca gaggatgcca tcgcgaggat ccatggtgtt ccagcctctt caaataaata 1681 attaccaata tgcaattctt ggaagtgatt actcctttac tcaagtgtat aactgggatg 1741 cagagaaagc caaatttgtg aaatttcagg aattaaatgt tcaggcacca agatcattca 1801 cacatgtgtc cattaataag cgtaattttc tttttgcttc cagttttaag ggaaatacac 1861 agatttacaa acatgtcata gttgacttaa gcgcatgaga caccaaattc tgtggctgcc 1921 atcagaaatt ttctacagta catgacccgg atgaactcaa tgcatgatga ctcttcttat 1981 cacacttgca aatgaatgcc tttcaaacat tgagactgct agaaccaagc actaccagta 2041 tctccatcct taactgtcca gtccagtgat gtgggaagtt accttttata agacaaaatt 2101 taattgtgta actgttcttt gcagtgaaga tgtgtaaata agcgtttaat ggtatctgtt 2161 actccaaaaa gaaatattaa tatgtacttt tccatttatt tattcatgtg tacagaaaca 2221 actgccaaat aaaatgttta cattttcttt cata //