LOCUS AF044579 2726 bp mRNA linear HUM 28-NOV-2001
DEFINITION Homo sapiens translocation related non-coding gene (TNRG10) mRNA,
complete sequence.
ACCESSION AF044579
VERSION AF044579.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2726)
AUTHORS Roberts,T. and Cowell,J.C.
TITLE TRNG10 (Translocation Related Neuroblastoma Gene on chromosome 10)
JOURNAL Hum. Mol. Genet. (1998) In press
REFERENCE 2 (bases 1 to 2726)
AUTHORS Roberts,T., Chernova,O. and Cowell,J.K.
TITLE NB4S, a member of the TBC1 domain family of genes, is truncated as
a result of a constitutional t(1;10)(p22;q21) chromosome
translocation in a patient with stage 4S neuroblastoma
JOURNAL Hum. Mol. Genet. 7 (7), 1169-1178 (1998)
PUBMED 9618176
REFERENCE 3 (bases 1 to 2726)
AUTHORS Roberts,T. and Cowell,J.C.
TITLE Direct Submission
JOURNAL Submitted (24-JAN-1998) Neurosciences NC3-150, Cleveland Clinic
Foundation, 9500 Euclid Avenue, Cleveland, OH 44195, USA
FEATURES Location/Qualifiers
source 1..2726
/db_xref="H-InvDB:HIT000063958"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="10"
/map="10q21"
/cell_line="Jurkat cell line RPMI 1640"
/note="polyA region was obtained using 3'RACE; found on
the 10q21 side of translocation breakpoint
t(1;10)(p22;q21); forms a fusion with the human EVI-5 gene
in such a way as to cause a truncation of EVI-5"
gene 1..2726
/gene="TRNG10"
/note="translocation related non-coding gene; transcript
found in cancer cells; not believed to be translated"
repeat_region 326..547
/gene="TRNG10"
/rpt_family="Alu"
/rpt_type=dispersed
repeat_region 2599..2709
/gene="TRNG10"
/rpt_family="Alu"
/rpt_type=dispersed
BASE COUNT 827 a 510 c 426 g 963 t
ORIGIN
1 ccccctctct cttactttta acctgattat ttcatatcag ttatatggga cttcagaaaa
61 ctttccttgt tcctcaagtc taaattagcc ctctctggtc acttttatgc catagatttt
121 caatatttat aattacatat gtgcatatgt atatgtgtgt atttgatatc gtttaagtgt
181 tgactccaag caattctaaa taacgcaagc accagaactg tgcctgtctg ctcaaaagtg
241 cagtcatccc ttagtatctg gggggattgg ttctagaaac cctgcaggta gcaaacactg
301 caaatgccta acttctttat ataagatagt gtagtatttg catataacct atgcatatcc
361 tccctatgct ttaaatcatc tctacattac ttataatacc tgatatagct gtaaatgtta
421 tgtagatagt tgctgtacag tattgttttt tatttgtatt atgttttagt gtcacattgt
481 tgtattttat tgtgtttttt ttcccaaata tttttgatct gcagttggtt gaatccgcag
541 atgtggagcc tgcatatatg aagggctgac cgtatactct ctgctccttc cagagtatct
601 ggcatgtgat gagctcgcca ccaaacattt agtgattcga taaggctctg gttgatttac
661 agtttctact ttcctgacac tctgttgctg gtttgaataa aaatttcttc ttgaaatgtc
721 atcataaatt gatttttatt ggaagattta cagaagaaaa ctaattttat atgttctgct
781 cctatgaaaa atttaatatt ttagtgtgat atctttgcca ttaattacta ttttgagggt
841 ttgcagtatt cttgatcatg tgttgtctgt gcaattcatt tttagagcaa agaagagtgt
901 gaagtttaaa aattaataaa ccaggtttta ttttagtctt tgtcttgatg gcattaggag
961 taaggagatg tggagtacct tgtatgacga ctaataccat ggaaagatct ggccaactaa
1021 caaatcattt atatcacgtt tctggataac tgtttataaa catacaatat attggactga
1081 taaaagctga taagtatatg attcaatgac taatacatgt ccaagtgaaa aatttttaca
1141 aatggacaat accctattac cagtgagcta tctgccctta gaaactcaga tttattagaa
1201 tcccaattac ctgtcagaat accaaacttg tccaatatga attcttcaat gccaaattac
1261 tttgctcaac tatattttca tataaagccc tcttaaaatc tttcttttcc atgaagttgt
1321 gttttttggt tttaattcca tagctcttag cctacctacc aattctctcc caagtacaca
1381 agcaggagca ccatctcaaa ggagtttttt tctttatata tttacttgtt tacttaaaaa
1441 ttcatttgtt ttgttttatt tgtttatgaa atatgtatat atatataggt cttgctacat
1501 attagacact gctccaagct ttttaaaagc tttactcatt gcttttgtca gttcatttca
1561 tccaaaagta aaatattgtt taccatacaa agttgtcatt tcaacaaatt ataatgtttt
1621 ctaccaaaat gatatgtcat gacatttagc aatttagccc tgcagtagat tttatttact
1681 ttgactcacc attagtctag aattaggatt ccatttttct ctttctaaaa atgcacaatt
1741 attaatgttt tcttattgaa aaaaataaca tcccattcat ttttattaac aaataccagt
1801 ataagtaagc ctatagaaga aaaattagcc atatcactac cctgtttagt ttttctctgt
1861 ctgtcttctg atcatatgta tatatctgaa aatggataat atttaagtga agcaaaaata
1921 atattcaaaa tgtacttcaa ttgaatccag attttatttg tatttcattt ctcaatattt
1981 tctcctctac aaaaacagag tgaagttgta agaatactag acccaagttt caaaatctca
2041 tgttaagtga gattttgcat gtcctccgta aaatttctgg agcactttat aaaagtttat
2101 tttcgtggaa atcaaaaaac caggtcatga tattcttttc taagtcccta aacctgtcta
2161 acaatgcaaa ggttgtctgt ccttcttaca tgtagactca tttgtctaag tgggccttaa
2221 catgtatgat ttccatcaag gctgcttggc aaaggctttc tgttagtgtg taaggggaat
2281 atgatgacca atataacaac ctcagtattt cctctacctc tcttcaactc ctcaacgtga
2341 acccaatgtt tttgtggaac acaaagcctc tgaatgcctg ggaagtcacc agtgtgatcc
2401 cagccaccac ccattaatct tcttaactag catgtccctc atcattacct cccttcccaa
2461 agccctttgc atgtgcctgt tccctggcaa gaaagcctca actaaatggc caagagctaa
2521 tgagaattcc ccccaaaatg gaaaattgaa tataaatgag aaagttttaa aaggtgccaa
2581 gatcaggccc ggtgcagtgt gtcacgcctg taatcccagc cctttgagag gccgaggtgg
2641 gcggataaca aggtcaggag atcgagacca tcctggctaa cacggtgaaa cctgtctcta
2701 ctaaaaatac caaaaaaaaa aaaaaa
//