LOCUS AF039945 6505 bp mRNA linear HUM 26-JUL-2016
DEFINITION Homo sapiens synaptojanin 2B mRNA, partial cds.
ACCESSION AF039945
VERSION AF039945.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6505)
AUTHORS Nemoto,Y., Wenk,M.R., Watanabe,M., Daniell,L., Murakami,T.,
Ringstad,N., Yamada,H., Takei,K. and De Camilli,P.
TITLE Identification and characterization of a synaptojanin 2 splice
isoform predominantly expressed in nerve terminals
JOURNAL J. Biol. Chem. 276 (44), 41133-41142 (2001)
PUBMED 11498538
REFERENCE 2 (bases 1 to 6505)
AUTHORS Nemoto,Y. and De Camilli,P.
TITLE Characterization of an alternative spliced form of synaptojanin 2
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 6505)
AUTHORS Nemoto,Y. and De Camilli,P.
TITLE Direct Submission
JOURNAL Submitted (24-DEC-1997) Howard Hughes Medical Institute and
Department of Cell Biology, Yale University Scool of Medicine,
Boyer Center for Molecular Medicine, 295 Congress Avenue, New
Haven, CT 06510, USA
FEATURES Location/Qualifiers
source 1..6505
/db_xref="H-InvDB:HIT000063514"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/tissue_type="brain"
CDS <1..4333
/note="inositol polyphosphate 5'-phosphatase; similar to
KIAA0348 sequence in GenBank Accession Number AB002346"
/codon_start=2
/product="synaptojanin 2B"
/protein_id="AAD02178.1"
/translation="YGKLTDAYGCLGELRLKSGGTSLSFLVLVTGCTSVGRIPDAEIY
KITATDFYPLQEEAKEEERLIALKKILSSGVFYFSWPNDGSRFDLTVRTQKQGDDSSE
WGNSFFWNQLLHVPLRQHQVSCCDWLLKIICGVVTIRTVYASHKQAKACLVSRVSCER
TGTRFHTRGVNDDGHVSNFVETEQMIYMDDGVSSFVQIRGSVPLFWEQPGLQVGSHHL
RLHRGLEANAPAFDRHMVLLKEQYGQQVVVNLLGSRGGEEVLNRAFKKLLWASCHAGD
TPMINFDFHQFAKGGKLEKLETLLRPQLKLHWEDFDVFTKGENVSPRFQKGTLRMNCL
DCLDRTNTVQSFIALEVLHLQLKTLGLSSKPIVDRFVESFKAMWSLNGHSLSKVFTGS
RALEGKAKVGKLKDGARSMSRTIQSNFFDGVKQEAIKLLLVGDVYGEEVADKGGMLLD
STALLVTPRILKAMTERQSEFTNFKRIRIAMGTWNVNGGKQFRSNVLRTAELTDWLLD
SPQLSGATDSQDDSSPADIFAVGFEEMVELSAGNIVNASTTNKKMWGEQLQKAISRSH
RYILLTSAQLVGVCLYIFVRPYHVPFIRDVAIDTVKTGMGGKAGNKGAVGIRFQFHST
SFCFICSHLTAGQSQVKERNEDYKEITQKLCFPMGRNVFSHDYVFWCGDFNYRIDLTY
EEVFYFVKRQDWKKLLEFDQLQLQKSSGKIFKDFHEGAINFGPTYKYDVGSAAYDTSD
KCRTPAWTDRVLWWRKKHPFDKTAGELNLLDSDLDVDTKVRHTWSPGALQYYGRAELQ
ASDHRPVLAIVEVEVQEVDVGARERVFQEVSSFQGPLDATVVVNLQSPTLEEKNEFPE
DLRTELMQTLGSYGTIVLVRINQGQMLVTFADSHSALSVLDVDGMKVKGRAVKIRPKT
KDWLKGLREEIIRKRDSMAPVSPTANSCLLEENFDFTSLDYESEGDILEDDEDYLVDE
FNQPGVSDSELGGDDLSDVPGPTALAPPSKSPALTKKKQHPTYKDDADLVELKRELEA
VGEFRHRSPSRSLSVPNRPRPPQPPQRPPPPTGLMVKKSASDASISSGTHGQYSILQT
ARLLPGAPQQPPKARTGISKPYNVKQIKTTNAQEAEAAIRCLLEARGGASEEALSAVA
PRDLEASSEPEPTPGAAKPETPQAPPLLPRRPPPRVPAIKKPTLRRTGKPLSPEEQFE
QQTVHFTIGPPETSVEAPPVVTAPRVPPVPKPRTFQPGKAAERPSHRKPASDEAPPGA
GASVPPPLEAPPLVPKVPPRRKKSAPAAFHLQVLQSNSQLLQGLTYNSSDSPSGHPPA
AGTVFPQGDFLSTSSATSPDSDGTKAMKPEAAPLLGDYQDPFWNLLHHPKLLNNTWLS
KSSDPLDSGTRSPKRDPIDPVSAGASAAKAELPPDHEHKTLGHWVTISDQEKRTALQV
FDPLAKT"
BASE COUNT 1724 a 1612 c 1634 g 1535 t
ORIGIN
1 gtatggcaag ctcacggacg cgtacggctg cctgggggag ctgaggctga aatctggtgg
61 cacgtctctg agcttcctgg tgttggtgac aggctgcaca tctgtgggca gaattccaga
121 tgctgaaatc tacaaaatca ctgccactga cttttaccct cttcaggaag aggccaagga
181 ggaggaacgc ctcatagctt tgaagaaaat cctcagctcg ggggtgttct atttctcatg
241 gccaaacgat gggtctcgct ttgacctgac tgtccgcacg cagaagcagg gggatgacag
301 ctctgaatgg gggaactcct tcttctggaa ccagctgttg cacgtgccct tgaggcagca
361 ccaggtgagc tgctgtgact ggctgctgaa gatcatctgc ggggtggtca ccatccgcac
421 cgtgtatgcc tcccacaagc aggccaaggc ctgcctcgtc tctcgcgtta gctgtgagcg
481 cacaggcact cgcttccaca cccgtggcgt gaacgacgac ggccatgtgt ccaacttcgt
541 ggagacagag cagatgattt acatggacga tggagtgtca tcttttgtcc agatcagagg
601 ctccgttccg ctgttctggg aacagccagg gcttcaggtt ggctcccatc atctgagact
661 ccacagaggc ctggaagcca atgcccctgc tttcgacagg cacatggtgc ttctgaagga
721 gcagtacggg cagcaggtgg tcgtgaacct tctgggaagc agaggcggag aggaggtgct
781 caacagagcc ttcaagaagc tgctctgggc ttcttgccac gcgggcgaca cgcctatgat
841 caattttgac ttccatcagt ttgccaaagg tgggaagcta gagaaattgg agaccctctt
901 gaggccacag ttaaagctgc actgggaaga cttcgatgtg ttcacaaagg gggagaacgt
961 cagtccacgt tttcagaaag gcactttgcg gatgaactgt cttgactgcc tggaccgaac
1021 caacactgtg cagagcttca tcgcgctcga ggtcctgcat ctgcagctca agaccctggg
1081 gctgagttca aaacccatcg ttgaccgctt tgtggagtcc ttcaaagcca tgtggtctct
1141 gaatggccac agcctgagca aggtgttcac aggcagcaga gccctggaag ggaaggccaa
1201 ggtggggaag ctgaaggatg gagcccggtc catgtctcga accatccagt ccaacttctt
1261 cgacggggtg aagcaggagg ccatcaagct gctgctggtt ggggacgtct acggcgagga
1321 ggtggcagac aaagggggca tgctgctgga cagcacggcg ctcctggtga ctcccaggat
1381 cctgaaagct atgactgagc gtcagtccga attcacaaat ttcaagcgga tccggattgc
1441 tatggggacc tggaacgtga acggaggaaa gcagttccgg agcaacgtgc tcaggacggc
1501 ggagctgaca gactggctgc tcgactcgcc ccagctctcg ggagctaccg actcccagga
1561 tgacagcagc ccagctgaca tatttgctgt ggggtttgaa gagatggtgg aattgagcgc
1621 agggaatatt gtcaatgcca gtactaccaa caagaagatg tggggtgaac agcttcagaa
1681 agccatctca cgctctcata gatacattct gttgacttcg gcacagctgg tgggcgtctg
1741 tctttatatc tttgtacgtc cataccatgt cccgttcatc agggacgtag ccatcgacac
1801 agtgaagacg ggcatggggg gcaaggcggg gaacaagggc gccgtcggca tccgcttcca
1861 gttccacagc accagcttct gcttcatatg tagtcacctg acggccgggc agtcccaggt
1921 gaaggagcgg aatgaagact acaaggagat cacccagaaa ctctgcttcc caatggggag
1981 aaatgttttt tctcatgatt atgtattttg gtgtggcgat ttcaactacc gcattgatct
2041 tacttatgaa gaagtcttct attttgttaa acgccaagac tggaagaaac ttctggaatt
2101 tgatcaacta cagctacaga aatcaagtgg aaaaattttt aaggactttc acgaaggagc
2161 cattaacttt ggacccacct acaagtatga cgttggctca gccgcctacg atacaagcga
2221 caaatgccgc acccccgcct ggacagacag ggtgctgtgg tggaggaaga aacatccctt
2281 tgataaaaca gctggagaac tcaaccttct agacagtgat ctagatgttg acaccaaagt
2341 cagacacacc tggtctcctg gtgccctgca gtattatggt cgtgcggagc tacaagcgtc
2401 tgatcacaga cctgtgctgg cgatcgtgga ggtggaagtt caggaagtcg atgtgggtgc
2461 tcgggagagg gttttccagg aagtgtcctc cttccagggc cccctggatg ccactgttgt
2521 agtaaacctt caatcaccga ccttagaaga gaaaaacgag tttccagagg acctgcgtac
2581 tgagctcatg cagaccttgg ggagttatgg gacaattgtt cttgtcagga tcaaccaagg
2641 gcagatgctg gtaacttttg cagacagtca ctcggctctc agtgtcctgg acgtggacgg
2701 tatgaaggtg aaaggcagag cagtgaagat tagaccgaag accaaggact ggctgaaagg
2761 tttgcgagag gagatcattc ggaaacgaga cagcatggcc cccgtgtctc ccactgccaa
2821 ctcctgtttg ctggaggaaa actttgactt cacaagtttg gactatgagt cagaagggga
2881 tattcttgaa gacgatgaag actacttggt ggatgaattc aatcagcctg gagtctcgga
2941 cagtgaactc gggggagacg acctctctga tgtccccggc cccacagcac tggctcctcc
3001 cagcaagtca cctgctctca ccaaaaagaa gcagcatcca acgtacaaag atgacgcgga
3061 cctggtggag ctcaagcggg agctggaagc cgtcggggag ttccgccacc gttctccgag
3121 caggtctctg tcggtcccca accggcctcg gccacctcaa cccccgcaga gacccccccc
3181 tccaaccggt ttaatggtga aaaagtcggc ttcagatgcg tccatctcct ccggcaccca
3241 tggacagtat tcaattttgc agacggcaag acttctacca ggagcacctc agcaacctcc
3301 caaggctcgg actggaataa gtaaacctta taatgtcaag cagatcaaaa ccaccaatgc
3361 ccaggaggca gaagcagcaa tccggtgtct cctggaagcc agaggaggtg cctccgaaga
3421 agccctaagt gccgtggccc caagggacct tgaagcatcc tctgaaccag agcccacacc
3481 gggggcagcc aaaccagaga ccccacaggc gcccccactc cttccccgtc ggcccccacc
3541 cagagttcct gccatcaaga agccaacctt gagaaggaca ggaaagcccc tgtcaccgga
3601 agaacagttt gagcaacaga ctgtccattt tacaatcggg cccccggaga caagcgttga
3661 ggcccctcct gtcgtgacag cccctcgagt ccctcctgtt cccaaaccaa gaacatttca
3721 gcctgggaaa gctgcagaga ggccaagcca caggaagcca gcatcagacg aagcccctcc
3781 tggggcagga gcctctgtgc caccacctct ggaggcgccg cctcttgtgc ccaaggtacc
3841 cccgaggagg aagaagtcag cccccgcagc cttccacctg caggtcctgc agagcaacag
3901 ccagcttctc cagggcctca cttacaatag cagtgacagc ccctctgggc acccacctgc
3961 cgcgggcacc gtcttcccac aaggggactt tctcagcact tcatctgcta caagccccga
4021 cagcgatggc accaaagcga tgaagccaga ggcagcccca cttcttggtg attatcagga
4081 ccccttctgg aaccttcttc accaccctaa actgttgaat aacacttggc tttctaagag
4141 ctcagaccct ttggactcag gaaccaggag ccccaaaaga gatcccatag acccagtgtc
4201 agctggcgct tcagctgcca aggcagagct gccaccagat catgaacaca aaaccttagg
4261 tcactgggtg acaatcagtg accaagaaaa gaggacagca ctgcaggtgt ttgacccact
4321 ggcaaaaaca tgactgagca gctttgaagg ctgcagtcct atagaatgca taccttcctc
4381 cctctagaca tccctccacc agaagagaca tctatttaaa ggcacactgg ccaaaacgtt
4441 tgtgcatctg tcactctcgt gtagtttaca aaaatcgtgt ctcttattca gtaagatggt
4501 tactcagcca ccaaaatata tttcactcaa ggcttgtaca tctgaagttt gctcttcaag
4561 gaatgggaac cttcctgtta aattcggtgt atggatttta agaaaggaat ctagccaatg
4621 aggtccaaga agttctcacc cattgaattt ttaaatggct gttcagttca tgttgtacgt
4681 gatggagatt tgtcttttgt tttatttgca ttttacagat ttggtataac attttgggga
4741 gccacctgaa ggttgatgta taaagtaagg attagagaaa gaggtcgttg tgaccattaa
4801 tagctgtcct ggcccactta aacaaggtta caaaaaatca gagtcggaag cagccaaata
4861 ggtcaaccta atgactagac tgtacattcc catgagcctt catgtttaag tgtgtacatg
4921 tgcgttaacc ttgatgatgc gtgaatcccg agggagccgg tggcatacac cgttagctta
4981 accttagctt aaactagctg aaggctcctg tgccatgtct tagacattgc atgccctatc
5041 aattactata atcctgagcc atggtgtgct actgaaacca atttttatcc accatctagt
5101 ccttattaaa tgaaacctca cggatccttt gttccgctta tattccatgc ataccacata
5161 aaagcacaca gtgcgaaaac tcttgctgat acgcgatatt gattctcatt gttagaatat
5221 ggagagtgtt tcagcctcgt ctgtccggct ggagcttcgg gatggaaagt gctatgtgtc
5281 cctgcatata agaatcacca ggccagtgtt tctgggtttg cttgtctata tgtttgtcta
5341 tattttttgc ctatacattt ttcccacgtt tccaacagca cttctcacct attcaataac
5401 tgaaaaagac attaccatag tgctttacat ttttaaagta atgttacaag gtctggaatc
5461 catttggagc agataccgtg ttttcgctat ttaataagaa gttcagtagt gaaatcttac
5521 tgtaccgcct gttgtatctg ggagcctcgt acagaggctc gcacagcagt gatcaagtgt
5581 catcccttac gtgactgggg gatgtctgtc ctaaaagctg actgctagga tagtaaggat
5641 catcttgcct gggctatgcc actgtcttgt taccaattag acatctggaa tttcataatt
5701 agttttcatt gtcactgtca agatatattg cagattactt aaatatggcc atcaaaacaa
5761 aagttacaac acgtatctct tttcatctga aaactaatac ctggaaaagg ataaaaaaaa
5821 aaaggaatcc gtgacccaca gagctagaca gataagatgc atagttgacc agtcataaaa
5881 ggcggtgttt aagtgatcag gatgccgttg gtggcattta cgtgctttat atgattttta
5941 cctctgtaac aaacacaaga aataaacaga atggtcctta acagagtttg ggggagagag
6001 caagatgggt tccttggaga agctgatttg ccaagatgca catcgctatt aacagccaga
6061 gtcataaatg aaatgaaatt gaagaattca ttcaaatgct cttttcccta taacctcttt
6121 tctcaccaaa aaggagataa atttgaaaac agataaatgt aacaaccagt caaagaagca
6181 ggggaaaagt aagctcctcc aaagttgctt gcagtgctgg aaatagatct catttttagg
6241 ttttctcttc gttccagata ccaaataaat gggacagaga ataaaatttt tgttaaaata
6301 tgtgctcatc tcctaagtag ctcttcagag tctgaccgta agtaaaaaca cacagaattg
6361 tgttgactgg gggaggtgaa tcacaaaaaa gttacgagga gtttaagagt taaatattat
6421 ttgatcgtgg ctgtcaaatt tagtgaacaa catagattgg atttggagtt ggtagtaagt
6481 atggttctca taccagaatt ctctt
//