LOCUS AF039747 3966 bp mRNA linear HUM 17-JUL-1999
DEFINITION Homo sapiens cadherin-10 (CDH10) mRNA, complete cds.
ACCESSION AF039747
VERSION AF039747.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3966)
AUTHORS Kools,P., Vanhalst,K., Van den Eynde,E. and van Roy,F.
TITLE The human cadherin-10 gene: complete coding sequence, predominant
expression in the brain, and mapping on chromosome 5p13-14
JOURNAL FEBS Lett. 452 (3), 328-334 (1999)
PUBMED 10386616
REFERENCE 2 (bases 1 to 3966)
AUTHORS Kools,P. and Van Roy,F.
TITLE Direct Submission
JOURNAL Submitted (23-DEC-1997) Dept. of Molecular Biology, Molecular Cell
Biology Unit, University of Ghent, Flanders Interuniversity
Institute for Biotechnology (VIB), Ledeganckstraat 35, Ghent
B-9000, Belgium
FEATURES Location/Qualifiers
source 1..3966
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="5"
/map="5p14"
gene 1..3966
/gene="CDH10"
CDS 1038..3404
/gene="CDH10"
/note="transmembrane cell adhesion molecule"
/codon_start=1
/product="cadherin-10"
/protein_id="AAD44017.1"
/translation="MTIHQFLLLFLFWVCLPHFCSPEIMFRRTPVPQRRILSSRVPRS
DGKILHRQKRGWMWNQFFLLEEYTGSDYQYVGKLHSDQDKGDGSLKYILSGDGAGTLF
IIDEKTGDIHATRRIDREEKAFYTLRAQAINRRTLRPVEPESEFVIKIHDINDNEPTF
PEEIYTASVPEMSVVGTSVVQVTATDADDPSYGNSARVIYSILQGQPYFSVEPETGII
RTALPNMNRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTDVNDNPPRFPQNTIHL
RVLESSPVGTAIGSVKATDADTGKNAEVEYRIIDGDGTDMFDIVTEKDTQEGIITVKK
PLDYESRRLYTLKVEAENTHVDPRFYYLGPFKDTTIVKISIEDVDEPPVFSRSSYLFE
VHEDIEVGTIIGTVMARDPDSISSPIRFSLDRHTDLDRIFNIHSGNGSLYTSKPLDRE
LSQWHNLTVIAAEINNPKETTRVAVFVRILDANDNAPQFAVFYDTFVCENARPGQLIQ
TISAVDKDDPLGGQKFFFSLAAVNPNFTVQDNEDNTARILTRKNGFNRHEISTYLLPV
VISDNDYPIQSSTGTLTIRVCACDSQGNMQSCSAEALLLPAGLSTGALIAILLCIIIL
LVIVVLFAALKRQRKKEPLILSKEDIRDNIVSYNDEGGGEEDTQAFDIGTLRNPAAIE
EKKLRRDIIPETLFIPRRTPTAPDNTDVRDFINERLKEHDLDPTAPPYDSLATYAYEG
NDSIAESLSSLESGTTEGDQNYDYLREWGPRFNKLAEMYGGGESDKDS"
regulatory 3946..3951
/regulatory_class="polyA_signal_sequence"
/gene="CDH10"
polyA_site 3966
/gene="CDH10"
BASE COUNT 1330 a 757 c 805 g 1074 t
ORIGIN
1 atgcatagag ctgttctaat taatggagag acaattcaca gttcatttat tcattgactc
61 aacaaatatt tatggaacaa caaatatgtg ttgttttagg cattccgaga tcaggaagta
121 aaaaatataa aaatctctgt tatcatggaa tttacagtct aatgatcaaa gggaggcaat
181 aaataaataa atttatttat ttaaaaactg tattcaaaga gtgataagtg ataagaagaa
241 agatgttagg gaagtgggag gagatataaa tgtactacaa gactggtcag gaaagaccac
301 acaaaaattg agtaaacaca caaaaggttt gaagaagtaa tcaaaagaga atacagagga
361 agtgcattcc atccagtggg aaggggaaga acaaaggatc tgaggcagga atgcaatgta
421 atgactaatt actatttgtg aggctctggt ccacatggat gaggaaaaat catgcctgtt
481 ttgttgaaac tccaaatctg gttggggaag aagttactaa tcaaataacc acccaaataa
541 atacataatc atatataatg ataaattgat aaattctgta aagggaaaat acaggtcact
601 atgaggaggt acaatgcaaa gttctgagtg attctgaaga gtcaaaaata tcttccctga
661 atagttgata cctatattga gatctgaagg ctgcatagaa tttaaccaga taaaagagaa
721 aagaaagcac tccaacatca taaccagcat gtgttagtta aaagtgatgc tgagaaagag
781 cttgagttag attgaagtag aatcagtgat agaaaataac agccgaaaac aaacaaaaag
841 gggacatagt gacaatttct cctgggttat tttggctgga accaacttcc attatccaga
901 agctgataaa aaagctttgg gaaacatgaa caaaacattg atgaaatgtt ggaaaccagt
961 tgaaacacag taaaaccaac tgggtaaaat aggaccactt ctcttcatct acactgggat
1021 ttgtcaagaa gtgaactatg acaatacatc aatttttgct actgtttcta ttctgggtat
1081 gcctgccaca tttctgctct ccagaaataa tgttcagaag gacgcctgtg ccacagcgaa
1141 gaattttaag ttcacgtgta ccaaggagtg atggcaaaat tctccatcgt caaaaacgtg
1201 gttggatgtg gaatcaattt ttcttacttg aagaatatac aggatctgat tatcagtacg
1261 taggcaagct acattcagac caagataaag gagatggatc actcaaatat atcttatctg
1321 gagatggagc tggtactctt tttattattg atgaaaaaac aggtgatatt catgccacaa
1381 ggcgaattga tagggaggaa aaggcctttt atactctacg cgcacaagct attaacagaa
1441 gaactctgag gccagtagag ccagagtcag agtttgtgat caaaattcat gatatcaatg
1501 acaatgagcc aacgttccca gaagaaatct atacagctag tgttcccgaa atgtctgttg
1561 taggtacttc tgtggtgcaa gtcacagcta cagatgccga tgacccttca tatgggaaca
1621 gcgccagagt catttacagc atacttcaag ggcagcccta tttctctgtg gagcctgaaa
1681 caggtatcat caggactgct ttaccgaaca tgaacagaga aaacagagag caataccaag
1741 tggtcatcca ggccaaagac atgggcggcc agatgggagg cttatcgggg acaaccactg
1801 tgaacatcac gctgacagat gtcaatgaca acccaccacg tttcccccag aacactattc
1861 atcttcgagt tcttgaatcc tccccagttg gcacagccat tggaagtgtc aaagcaactg
1921 atgctgacac tgggaaaaat gctgaagtag aataccgaat tattgatggt gacggtactg
1981 atatgtttga catcgtgact gagaaggaca cacaggaagg catcatcact gtgaaaaagc
2041 cactcgacta tgagagccga agactttata ctctgaaagt cgaagcagaa aacacccatg
2101 tagatccccg tttttattac ctaggaccat ttaaagatac taccatagtg aaaatctcta
2161 tagaagatgt ggatgaacct cctgttttta gtaggtcctc ctatctgttt gaagttcatg
2221 aagatattga agtgggcaca atcattggta ctgtaatggc aagggaccca gattctattt
2281 ccagccccat tagattttcc ttggatcgcc atactgacct tgacagaatc tttaacattc
2341 attcaggaaa tggatctctt tatacatcaa aacctcttga ccgtgaacta tctcagtggc
2401 ataatcttac tgttattgct gctgaaatca acaatcccaa agagacaaca cgcgtggctg
2461 tttttgtgag aattttggat gctaatgaca atgccccaca gtttgctgtg ttctatgaca
2521 cttttgtatg tgaaaatgcc agaccagggc agctaataca gactataagt gcagtagaca
2581 aagatgaccc tttaggtgga cagaaatttt ttttcagttt agctgctgtc aatccaaact
2641 tcacagtaca ggataatgaa gataatactg ccagaatctt aaccagaaaa aatggattca
2701 atagacatga aatcagtacc tatctcttgc ctgtggtgat atcagacaat gattacccaa
2761 ttcagagcag cacaggcaca ctgaccattc gagtgtgtgc ttgtgacagc caaggcaaca
2821 tgcaatcctg cagtgctgaa gccctgctcc tccctgccgg cctcagcact ggggccttga
2881 tcgccatcct cctctgcatc atcattctac tggttatagt agtactgttt gcagctctga
2941 aaagacagcg aaaaaaagag cctctgatct tgtcaaaaga agatatcaga gacaacattg
3001 tgagctataa cgatgagggt ggtggagagg aggacaccca ggcctttgat atcggcaccc
3061 tgaggaatcc tgcagccatt gaggaaaaaa agctccggcg agatattatt ccagaaacgt
3121 tatttattcc tcggaggact cctacagctc cagataacac ggacgtccgg gatttcatta
3181 atgaaaggct aaaagagcat gatcttgacc ccaccgcacc cccctacgac tcacttgcaa
3241 cctatgccta tgaaggaaat gattccattg ctgaatctct gagttcatta gaatcaggta
3301 ctactgaagg agaccaaaac tacgattacc tccgagaatg gggccctcgg tttaataagc
3361 tagcagaaat gtatggtggt ggggaaagtg acaaagactc ttaacgtagg atatatgttc
3421 tgttcaaaca agagaaagta actctaccca tgctgtctcc acttcacaat atttgatatt
3481 caggagcatt ttcctgccag tcagcacaat tttttttctc atttacttct taatttgttc
3541 attaattaca ttaattcttt cctgtaggat gtctcatgga atatatatga cattttattt
3601 aatcacttcc aagagccaaa gctatggaaa tacagtgttg tccatcttag taaataaaag
3661 ataatttcag aaacatgaac aggatagttc tcccttaagc aacctcacaa acaagccgct
3721 tctgttaggt acatgtcctg cccttgcaaa tgaagctttt aaaaaggtga agaaaaattt
3781 tacagtatat cctgttctgt acattaaatt aaaaaaacaa aaatgtacat gtgatgttag
3841 taggtgtgat atgcaacctg gtatacagac atttgtgcaa tttcatttca tcaaattcta
3901 tctgctaatg ttttatattt atatttttgt atttattttt aaaaaaataa accagttttt
3961 acaact
//