LOCUS AF039700 2236 bp mRNA linear HUM 05-MAY-1999
DEFINITION Homo sapiens antigen NY-CO-38 (NY-CO-38) mRNA, complete cds.
ACCESSION AF039700
VERSION AF039700.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2236)
AUTHORS Scanlan,M.J., Chen,Y.T., Williamson,B., Gure,A.O., Stockert,E.,
Gordan,J.D., Tureci,O., Sahin,U., Pfreundschuh,M. and Old,L.J.
TITLE Characterization of human colon cancer antigens recognized by
autologous antibodies
JOURNAL Int. J. Cancer 76 (5), 652-658 (1998)
PUBMED 9610721
REFERENCE 2 (bases 1 to 2236)
AUTHORS Scanlan,M.J.
TITLE Direct Submission
JOURNAL Submitted (23-DEC-1997) Ludwig Institute for Cancer Research, New
York Branch at Memorial Sloan-Kettering Cancer Center, 1275 York
Avenue, New York, NY 10021, USA
FEATURES Location/Qualifiers
source 1..2236
/db_xref="H-InvDB:HIT000063503"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
gene 1..2236
/gene="NY-CO-38"
CDS 97..2055
/gene="NY-CO-38"
/note="PDZ domain protein"
/codon_start=1
/product="antigen NY-CO-38"
/protein_id="AAC18049.1"
/translation="MDRKVAREFRHKVDFLIENDAEKDYLYDVLRMYHQTMDVAVLVG
DLKLVINEPSRLPLFDAIRPLIPLKHQVEYDQLTPRRSRKLKEVRLDRLHPEGLGLSV
RGGLEFGCGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRTKKTV
SIKVRHIGLIPVKSSPDEPLTWQYVDQFVSESGGVRGSLGSPGNRENKEKKVFISLVG
SRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVN
VLKNSRSLTISIVAAAGRELFMTDRERLAEARQRELQRQELLMQKRLAMESNKILQEQ
QEMERQRRKEIAQKAAEENERYRKEMEQIVEEEEKFKKQWEEDWGSKEQLLLPKTITA
EVHPVPLRKPKYDQGVEPELEPADDLDGGTEEQGEQDFRKYEEGFDPYSMFTPEQIMG
KDVRLLRIKKEGSLDLALEGGVDSPIGKVVVSAVYERGAAERHGGIVKGDEIMAINGK
IVTDYTLAEADAALQKAWNQGGDWIDLVVAVCPPKEYDDELTFLLKSKRGNQIHALGN
SELRPHLVNTKPRTSLERGHMTHTRWHPWDLNLSPRNLKLPLALNQGQIRNSSGHFFE
GQCGGKGAASRLGEDLKDPDSHSFPLAQ"
BASE COUNT 548 a 588 c 653 g 447 t
ORIGIN
1 cctggcccgg tcgcggtcgc ggctctttcc agctcctggc agccgggcac ccgaaggaac
61 gggtcgtgca acgacgcagc tggacctggc ccagccatgg accgaaaagt ggcccgagaa
121 ttccggcata aggtggattt tctgattgaa aatgatgcag agaaggacta tctctatgat
181 gtgctgcgaa tgtaccacca gaccatggac gtggccgtgc tcgtgggaga cctgaagctg
241 gtcatcaatg aacccagccg tctgcctctg tttgatgcca ttcggccgct gatcccactg
301 aagcaccagg tggaatatga tcagctgacc ccccggcgct ccaggaagct gaaggaggtg
361 cgtctggacc gtctgcaccc cgaaggcctc ggcctgagtg tgcgtggtgg cctggagttt
421 ggctgtgggc tcttcatctc ccacctcatc aaaggcggtc aggcagacag cgtcgggctc
481 caggtagggg acgagatcgt ccggatcaat ggatattcca tctcctcctg tacccatgag
541 gaggtcatca acctcattcg aaccaagaaa actgtgtcca tcaaagtgag acacatcggc
601 ctgatccccg tgaaaagctc tcctgatgag cccctcactt ggcagtatgt ggatcagttt
661 gtgtcggaat ctgggggcgt gcgaggcagc ctgggctccc ctggaaatcg ggaaaacaag
721 gagaagaagg tcttcatcag cctggtaggc tcccgaggcc ttggctgcag catttccagc
781 ggccccatcc agaagcctgg catctttatc agccatgtga aacctggctc cctgtctgct
841 gaggtgggat tggagatagg ggaccagatt gtcgaagtca atggcgtcga cttctctaac
901 ctggatcaca aggaggctgt aaatgtgctg aaaaatagcc gcagcctgac catctccatt
961 gtagctgcag ctggccggga gctgttcatg acagaccggg agcggctggc agaggcgcgg
1021 cagcgtgagc tgcagcggca ggagcttctc atgcagaagc ggctggcgat ggagtccaac
1081 aagatcctcc aggagcagca ggagatggag cggcaaagga gaaaagaaat tgcccagaag
1141 gcagcagagg aaaatgagag ataccggaag gagatggaac agattgtaga ggaggaagag
1201 aagtttaaga agcaatggga agaagactgg ggctcaaagg aacagctact cttgcctaaa
1261 accatcactg ctgaggtaca cccagtaccc cttcgcaagc caaagtatga tcagggagtg
1321 gaacctgagc tcgagcccgc agatgacctg gatggaggca cggaggagca gggagagcag
1381 gatttccgga aatatgagga aggctttgac ccctactcta tgttcacccc agagcagatc
1441 atggggaagg atgtccggct cctacgcatc aagaaggagg gatccttaga cctggccctg
1501 gaaggcggtg tggactcccc cattgggaag gtggtcgttt ctgctgtgta tgagcgggga
1561 gctgctgagc ggcatggtgg cattgtgaaa ggggacgaga tcatggcaat caacggcaag
1621 attgtgacag actacaccct ggctgaggct gacgctgccc tgcagaaggc ctggaatcag
1681 ggcggggact ggatcgacct tgtggttgcc gtctgccccc caaaggagta tgacgatgag
1741 ctgaccttct tgctgaagtc caaaagggga aaccaaattc acgcgttagg aaacagtgag
1801 ctccggcccc acctcgtgaa cacaaagcct cggaccagcc ttgagagagg ccacatgaca
1861 cacaccagat ggcatccttg ggacctgaat ctatcaccca ggaatctcaa actccctttg
1921 gccctgaacc agggccagat aaggaacagc tcgggccact tttttgaagg ccaatgtgga
1981 ggaaagggag cagccagccg tttgggagaa gatctcaagg atccagactc tcattccttt
2041 cctctggccc agtgaatttg gtctctccca gctttggggg actccttcct tgaaccctaa
2101 taagacccca ctggagtctc tctctctcca tccctctcct ctgccctctg ctctaattgc
2161 tgccaggatt gtcactccaa accttactct gagctcatta ataaaataaa cagatttatt
2221 ttccagctta aaaaaa
//