LOCUS AF039699 2162 bp mRNA linear HUM 05-MAY-1999
DEFINITION Homo sapiens antigen NY-CO-37 (NY-CO-38) mRNA, complete cds.
ACCESSION AF039699
VERSION AF039699.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2162)
AUTHORS Scanlan,M.J., Chen,Y.T., Williamson,B., Gure,A.O., Stockert,E.,
Gordan,J.D., Tureci,O., Sahin,U., Pfreundschuh,M. and Old,L.J.
TITLE Characterization of human colon cancer antigens recognized by
autologous antibodies
JOURNAL Int. J. Cancer 76 (5), 652-658 (1998)
PUBMED 9610721
REFERENCE 2 (bases 1 to 2162)
AUTHORS Scanlan,M.J.
TITLE Direct Submission
JOURNAL Submitted (23-DEC-1997) Ludwig Institute for Cancer Research, New
York Branch at Memorial Sloan-Kettering Cancer Center, 1275 York
Avenue, New York, NY 10021, USA
FEATURES Location/Qualifiers
source 1..2162
/db_xref="H-InvDB:HIT000063502"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/tissue_type="colon cancer metastasis to lung"
gene 1..2162
/gene="NY-CO-38"
CDS 97..1308
/gene="NY-CO-38"
/note="PDZ domain protein; NY-CO-38 antigen splice
variant"
/codon_start=1
/product="antigen NY-CO-37"
/protein_id="AAC18048.1"
/translation="MDRKVAREFRHKVDFLIENDAEKDYLYDVLRMYHQTMDVAVLVG
DLKLVINEPSRLPLFDAIRPLIPLKHQVEYDQLTPRRSRKLKEVRLDRLHPEGLGLSV
RGGLEFGCGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRTKKTV
SIKVRHIGLIPVKSSPDEPLTWQYVDQFVSESGGVRGSLGSPGNRENKEKKVFISLVG
SRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVN
VLKNSRSLTISIVAAAGRELFMTDRERLAEARQRELQRQELLMQKRLAMESNKILQEQ
QEMERQRRKEIAQKAAEENERYRKEMEQIVEEEEKFKKQWEEDWGSKEQLLLPKTITA
EVHPVPLRKPK"
BASE COUNT 528 a 573 c 622 g 439 t
ORIGIN
1 cctggcccgg tcgcggtcgc ggctctttcc agctcctggc agccgggcac ccgaaggaac
61 gggtcgtgca acgacgcagc tggacctggc ccagccatgg accgaaaagt ggcccgagaa
121 ttccggcata aggtggattt tctgattgaa aatgatgcag agaaggacta tctctatgat
181 gtgctgcgaa tgtaccacca gaccatggac gtggccgtgc tcgtgggaga cctgaagctg
241 gtcatcaatg aacccagccg tctgcctctg tttgatgcca ttcggccgct gatcccactg
301 aagcaccagg tggaatatga tcagctgacc ccccggcgct ccaggaagct gaaggaggtg
361 cgtctggacc gtctgcaccc cgaaggcctc ggcctgagtg tgcgtggtgg cctggagttt
421 ggctgtgggc tcttcatctc ccacctcatc aaaggcggtc aggcagacag cgtcgggctc
481 caggtagggg acgagatcgt ccggatcaat ggatattcca tctcctcctg tacccatgag
541 gaggtcatca acctcattcg aaccaagaaa actgtgtcca tcaaagtgag acacatcggc
601 ctgatccccg tgaaaagctc tcctgatgag cccctcactt ggcagtatgt ggatcagttt
661 gtgtcggaat ctgggggcgt gcgaggcagc ctgggctccc ctggaaatcg ggaaaacaag
721 gagaagaagg tcttcatcag cctggtaggc tcccgaggcc ttggctgcag catttccagc
781 ggccccatcc agaagcctgg catctttatc agccatgtga aacctggctc cctgtctgct
841 gaggtgggat tggagatagg ggaccagatt gtcgaagtca atggcgtcga cttctctaac
901 ctggatcaca aggaggctgt aaatgtgctg aaaaatagcc gcagcctgac catctccatt
961 gtagctgcag ctggccggga gctgttcatg acagaccggg agcggctggc agaggcgcgg
1021 cagcgtgagc tgcagcggca ggagcttctc atgcagaagc ggctggcgat ggagtccaac
1081 aagatcctcc aggagcagca ggagatggag cggcaaagga gaaaagaaat tgcccagaag
1141 gcagcagagg aaaatgagag ataccggaag gagatggaac agattgtaga ggaggaagag
1201 aagtttaaga agcaatggga agaagactgg ggctcaaagg aacagctact cttgcctaaa
1261 accatcactg ctgaggtaca cccagtaccc cttcgcaagc caaagtgatt tccggaaata
1321 tgaggaaggc tttgacccct actctatgtt caccccagag cagatcatgg ggaaggatgt
1381 ccggctccta cgcatcaaga aggagggatc cttagacctg gccctggaag gcggtgtgga
1441 ctcccccatt gggaaggtgg tcgtttctgc tgtgtatgag cggggagctg ctgagcggca
1501 tggtggcatt gtgaaagggg acgagatcat ggcaatcaac ggcaagattg tgacagacta
1561 caccctggct gaggctgacg ctgccctgca gaaggcctgg aatcagggcg gggactggat
1621 cgaccttgtg gttgccgtct gccccccaaa ggagtatgac gatgagctga ccttcttgct
1681 gaagtccaaa aggggaaacc aaattcacgc gttaggaaac agtgagctcc ggccccacct
1741 cgtgaacaca aagcctcgga ccagccttga gagaggccac atgacacaca ccagatggca
1801 tccttgggac ctgaatctat cacccaggaa tctcaaactc cctttggccc tgaaccaggg
1861 ccagataagg aacagctcgg gccacttttt tgaaggccaa tgtggaggaa agggagcagc
1921 cagccgtttg ggagaagatc tcaaggatcc agactctcat tcctttcctc tggcccagtg
1981 aatttggtct ctcccagctt tgggggactc cttccttgaa ccctaataag accccactgg
2041 agtctctctc tctccatccc tctcctctgc cctctgctct aattgctgcc aggattgtca
2101 ctccaaacct tactctgagc tcattaataa aataaacaga tttattttcc agcttaaaaa
2161 aa
//