LOCUS AF039691 2885 bp mRNA linear HUM 05-MAY-1999
DEFINITION Homo sapiens antigen NY-CO-9 (NY-CO-9) mRNA, partial cds.
ACCESSION AF039691
VERSION AF039691.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2885)
AUTHORS Scanlan,M.J., Chen,Y.T., Williamson,B., Gure,A.O., Stockert,E.,
Gordan,J.D., Tureci,O., Sahin,U., Pfreundschuh,M. and Old,L.J.
TITLE Characterization of human colon cancer antigens recognized by
autologous antibodies
JOURNAL Int. J. Cancer 76 (5), 652-658 (1998)
PUBMED 9610721
REFERENCE 2 (bases 1 to 2885)
AUTHORS Scanlan,M.J.
TITLE Direct Submission
JOURNAL Submitted (23-DEC-1997) Ludwig Institute for Cancer Research, New
York Branch at Memorial Sloan-Kettering Cancer Center, 1275 York
Avenue, New York, NY 10021, USA
FEATURES Location/Qualifiers
source 1..2885
/db_xref="H-InvDB:HIT000063494"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/tissue_type="colorectal carcinoma"
gene <1..2885
/gene="NY-CO-9"
CDS <1..2695
/gene="NY-CO-9"
/note="putative Type II integral membrane protein"
/codon_start=2
/product="antigen NY-CO-9"
/protein_id="AAC18040.1"
/translation="EFLLSKSKEPTPGGLNHSLPQHPKCWGAHHASLDQSSPPQSGPP
GTPPSYKLPLPGPYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVI
STFKKRAVEITGAGPGASSVCNSAPGSGPSSPNSSHSTIAENGFTGSVPNIPTEMLPQ
HRALPLDSSPNQFSLYTSPSLPNISLGLQATVTVTNSHLTASPKLSTQQEAERQALQS
LRQGGTLTGKFMSTSSIPGCLLGVALEGDGSPHGHASLLQHVLLLEQARQQSTLIAVP
LHGQSPLVTGERVATSMRTVGKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLE
KQKQQQLQLGKILTKTGELPRQPTTHPEETEEELTEQQEVLLGEGALTMPREGSTESE
STQEDLEEEDEEEDGEEEEDCIQVKDEEGESGAEEGPDLEEPGAGYKKLFSDAQPLQP
LQVYQAPLSLATVPHQALGRTQSSPAAPGGMKNPPDQPVKHLFTTSVVYDTFMLKHQC
MCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGT
SPLNRQKLDSKKLLGPISQKMYAVLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLLELA
FKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWD
IHHGNGTQQAFYNDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGV
DPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHL
TRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVKLQPLDEAVLQQKPNINAV
ATLEKVIEIQSKHWSCVQKFAAGLGRSLRGAQAGETEEAEM"
BASE COUNT 626 a 901 c 838 g 520 t
ORIGIN
1 ggaattcctc ttgtcgaagt caaaggagcc cacaccaggc ggcctcaacc attccctccc
61 acagcacccc aaatgctggg gagcccacca tgcttctttg gaccagagtt cccctcccca
121 gagcggcccc cctgggacgc ctccctccta caaactgcct ttgcctgggc cctacgacag
181 tcgagacgac ttccccctcc gcaaaacagc ctctgaaccc aacttgaaag tgcgttcaag
241 gctaaaacag aaggtggctg agcggagaag cagtcccctc ctgcgtcgca aggatgggac
301 tgttattagc acctttaaga agagagctgt tgagatcaca ggtgccgggc ctggggcgtc
361 gtccgtgtgt aacagcgcac ccggctccgg ccccagctct cccaacagct cccacagcac
421 catcgctgag aatggcttta ctggctcagt ccccaacatc cccactgaga tgctccctca
481 gcaccgagcc ctccctctgg acagctcccc caaccagttc agcctctaca cgtctccttc
541 tctgcccaac atctccctag ggctgcaggc cacggtcact gtcaccaact cacacctcac
601 tgcctccccg aagctgtcga cacagcagga ggccgagagg caggccctcc agtccctgcg
661 gcagggtggc acgctgaccg gcaagttcat gagcacatcc tctattcctg gctgcctgct
721 gggcgtggca ctggagggcg acgggagccc ccacgggcat gcctccctgc tgcagcatgt
781 gctgttgctg gagcaggccc ggcagcagag caccctcatt gctgtgccac tccacgggca
841 gtccccacta gtgacgggtg aacgtgtggc caccagcatg cggacggtag gcaagctccc
901 gcggcatcgg cccctgagcc gcactcagtc ctcaccgctg ccgcagagtc cccaggccct
961 gcagcagctg gtcatgcaac aacagcacca gcagttcctg gagaagcaga agcagcagca
1021 gctacagctg ggcaagatcc tcaccaagac aggggagctg cccaggcagc ccaccaccca
1081 ccctgaggag acagaggagg agctgacgga gcagcaggag gtcttgctgg gggagggagc
1141 cctgaccatg ccccgggagg gctccacaga gagtgagagc acacaggaag acctggagga
1201 ggaggacgag gaagaggatg gggaggagga ggaggattgc atccaggtta aggacgagga
1261 gggcgagagt ggtgctgagg aggggcccga cttggaggag cctggtgctg gatacaaaaa
1321 actgttctca gatgcccaac cgctgcaacc tttgcaggtg taccaagcgc ccctcagcct
1381 ggccactgtg ccccaccaag ccctgggccg tacccaatcc tcccctgctg cccctggggg
1441 catgaagaac cccccagacc aacccgtcaa gcacctcttc accacaagtg tggtctacga
1501 cacgttcatg ctaaagcacc agtgcatgtg cgggaacaca cacgtgcacc ctgagcatgc
1561 tggccggatc cagagcatct ggtcccggct gcaggagaca ggcctgctta gcaagtgcga
1621 gcggatccga ggtcgcaaag ccacgctaga tgagatccag acagtgcact ctgaatacca
1681 caccctgctc tatgggacca gtcccctcaa ccggcagaag ctagacagca agaagttgct
1741 cggtcccatc agccagaaga tgtatgctgt gctgccttgt gggggcatcg gggtggacag
1801 tgacaccgtg tggaatgaga tgcactcctc cagtgctgtg cgcatggcag tgggctgcct
1861 gctggagctg gccttcaagg tggctgcagg agagctcaag aatggatttg ccatcatccg
1921 gcccccagga caccacgccg aggaatccac agccatggga ttctgcttct tcaactctgt
1981 agccatcacc gcaaaactcc tacagcagaa gttgaacgtg ggcaaggtcc tcatcgtgga
2041 ctgggacatt caccatggca atggcaccca gcaggcgttc tacaatgacc cctctgtgct
2101 ctacatctct ctgcatcgct atgacaacgg gaacttcttt ccaggctctg gggctcctga
2161 agaggttggt ggaggaccag gcgtggggta caatgtgaac gtggcatgga caggaggtgt
2221 ggaccccccc attggagacg tggagtacct tacagccttc aggacagtgg tgatgcccat
2281 tgcccacgag ttctcacctg atgtggtcct agtctccgcc gggtttgatg ctgttgaagg
2341 acatctgtct cctctgggtg gctactctgt caccgccaga tgttttggcc acttgaccag
2401 gcagctgatg accctggcag ggggccgggt ggtgctggcc ctggagggag gccatgactt
2461 gaccgccatc tgtgatgcct ctgaagcttg tgtctcggct ctgctcagtg taaagctgca
2521 gcccttggat gaggcagtct tgcagcaaaa gcccaacatc aacgcagtgg ccacgctaga
2581 gaaagtcatc gagatccaga gcaaacactg gagctgtgtg cagaagttcg ccgctggtct
2641 gggccggtcc ctgcgagggg cccaagcagg tgagaccgaa gaagccgaaa tgtgaacgcc
2701 atggccttgc tgttggtggg ggccgaacag gcccaagctg cggcagcccg ggaacacagc
2761 cccaggccgg cagaggagcc catggagcag gagcctgccc tgtgacgccc cggcccccat
2821 ccctttgggc ttcaccattg tgattttgtt tattttttct attaaaaaca aaaagttaaa
2881 aattt
//