LOCUS AF035961 1958 bp mRNA linear HUM 19-FEB-1998
DEFINITION Homo sapiens transglutaminase X mRNA, alternatively spliced short
form, complete cds.
ACCESSION AF035961
VERSION AF035961.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1958)
AUTHORS Aeschlimann,D., Koeller,M.K., Allen-Hoffmann,B.L. and Mosher,D.F.
TITLE Isolation of a cDNA encoding a novel member of the transglutaminase
gene family from human keratinocytes. Detection and identification
of transglutaminase gene products based on reverse
transcription-polymerase chain reaction with degenerate primers
JOURNAL J. Biol. Chem. 273 (6), 3452-3460 (1998)
PUBMED 9452468
REFERENCE 2 (bases 1 to 1958)
AUTHORS Aeschlimann,D. and Koeller,M.K.
TITLE Direct Submission
JOURNAL Submitted (26-NOV-1997) Orthopedic Surgery, University of
Wisconsin, F4/312 Clinical Science Center, 600 Highland Ave,
Madison, WI 53792, USA
FEATURES Location/Qualifiers
source 1..1958
/db_xref="H-InvDB:HIT000063321"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/cell_type="primary keratinocytes"
/tissue_type="foreskin"
CDS 9..1925
/EC_number="2.3.2.13"
/note="alternatively spliced, short form; lacking sequence
encoded by exon III"
/codon_start=1
/product="transglutaminase X"
/protein_id="AAC02979.1"
/translation="MAQGLEVALTDLQSSRNNVRHHTEEITVDHLLVRRGQAFNLTLY
FRNRSFQPGLDNIIFVVETEDAVYLDSEPQRQEYVMNDYGFIYQGSKNWIRPCPWNYG
QFEDKIIDICLKLLDKSLHFQTDPATDCALRGSPVYVSRVVCAMINSNDDNGVLNGNW
SENYTDGANPAEWTGSVAILKQWNATGCQPVRYGQCWVFAAVMCTVMRCLGIPTRVIT
NFDSGHDTDGNLIIDEYYDNTGRILGNKKKDTIWNFHVWNECWMARKDLPPAYGGWQV
LDATPQEMSNGVYCCGPASVRAIKEGEVDLNYDTPFVFSMVNADCMSWLVQGGKEQKL
HQDTSSVGNFISTKSIQSDERDDITENYKYEEGSLQERQVFLKALQKLKARSFHGSQR
GAELQPSRPTSLSQDSPRSLHTPSLRPSDVVQVSLKFKLLDPPNMGQDICFVLLALNM
SSQFKDLKVNLSAQSLLHDGSPLSPFWQDTAFITLSPKEAKTYPCKISYSQYSQYLST
DKLIRISALGEEKSSPEKILVNKIITLSYPSITINVLGAAVVNQPLSIQVIFSNPLSE
QVEDCVLTVEGSGLFKKQQKVFLGVLKPQHQASIILETVPFKSGQRQIQANMRSNKFK
DIKGYRNVYVDFAL"
BASE COUNT 520 a 522 c 509 g 407 t
ORIGIN
1 cagctaccat ggcccaaggg ctagaagtgg ccctcacaga cctccagagc tccagaaata
61 atgtgcggca ccacacggag gagatcactg tggaccacct gcttgttcgc cggggccagg
121 ccttcaacct caccctgtac ttcaggaacc ggagcttcca gccaggcctg gacaacatca
181 tcttcgtggt tgaaactgag gatgctgtct acttggacag tgaaccccag aggcaggagt
241 atgtcatgaa tgattatggc ttcatctacc aaggcagcaa gaactggatc cgcccatgtc
301 cctggaacta tggacagttt gaagacaaaa tcatagacat ctgcctgaag ctgctagaca
361 agagcctgca cttccagact gacccagcca cagactgtgc tctgcgggga agccccgtct
421 acgtcagcag agtggtgtgt gccatgatca acagcaatga tgataatggg gtgctcaatg
481 gaaactggag tgagaattac acagacggcg ccaaccctgc ggagtggacg ggcagcgtgg
541 ccatcctgaa gcagtggaac gccacaggct gccagcccgt gcgctacggg caatgctggg
601 tctttgctgc cgtcatgtgc acagtgatga ggtgtctggg gatccctacc cgtgtgatca
661 ccaacttcga ctctggccac gatacagatg gaaacctgat catagatgag tattatgaca
721 acacaggcag gattttgggg aataagaaga aggatactat ctggaacttc catgtctgga
781 atgagtgctg gatggcccgg aaggatctgc cccctgcata tggaggctgg caggtgctgg
841 acgccacacc tcaggagatg agcaacggcg tctactgctg tggccctgcc tctgtcagag
901 ccatcaaaga aggagaagtg gacctgaact atgacacgcc ctttgtgttt tcgatggtga
961 atgctgactg catgtcctgg ctcgtccagg gagggaagga gcagaagctt caccaggaca
1021 cgagttctgt tggcaatttt atcagcacaa agagcatcca gagtgacgag cgggatgaca
1081 tcacagagaa ctacaagtat gaagaaggat ccctccagga gaggcaggtg tttctgaagg
1141 ctctgcagaa gctgaaggct agaagcttcc atggctccca aagaggagca gagttgcaac
1201 cttccaggcc cacatcactg agccaggaca gccctcggag cctgcataca ccttcccttc
1261 gacccagtga tgtggtgcaa gtctccctga aattcaagct gctcgacccg cccaacatgg
1321 gccaggatat atgctttgtc ctgctggccc tcaacatgtc ctcccagttc aaggacctca
1381 aagtgaacct gagtgcccag tctctgctgc acgatggcag ccccctgtcc ccattctggc
1441 aggacacagc gttcatcaca ctctctccta aagaagcaaa gacctacccc tgcaaaatct
1501 cctattccca gtacagccag tacctgtcaa cagacaagct gatccgcatc agtgccctgg
1561 gtgaagagaa aagcagtcct gagaaaatcc tggtgaacaa gatcatcacc ttatcttatc
1621 caagcatcac gattaatgtt ctaggagcag ccgttgtgaa ccagccactc tccatacagg
1681 tgatattttc aaaccccctc tcggagcagg ttgaggactg tgtgctgact gtggaaggaa
1741 gtggcctctt caagaaacag cagaaagtct tccttggagt cctcaaaccc caacaccaag
1801 caagcatcat tctggagacc gtccccttca agagtggaca aaggcagatc caagctaata
1861 tgagaagcaa caagtttaag gacattaagg gttacaggaa tgtttatgta gactttgcat
1921 tataaattct ggaacaacgc gccagacgtg tgagtttc
//