LOCUS AF031815 2521 bp mRNA linear HUM 22-MAY-2001 DEFINITION Homo sapiens calcium-activated potassium channel (KCNN3) mRNA, complete cds. ACCESSION AF031815 VERSION AF031815.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2521) AUTHORS Chandy,K.G., Fantino,E., Wittekindt,O., Kalman,K., Tong,L.-L., Ho,T.-H., Gutman,G.A., Crocq,M.-A., Ganguli,R., Nimgaonkar,V., Morris-Rosendahl,D.J. and Gargus,J.J. TITLE Isolation of a novel potassium channel gene hSKCa3 containing a polymorphic CAG repeat: a candidate for schizophrenia and bipolar disorder? JOURNAL Mol. Psych. 3, 32-37 (1998) REFERENCE 2 (bases 1 to 2521) AUTHORS Chandy,K.G., Fantino,E., Wittekindt,O., Kalman,K., Tong,L.-L., Ho,T.-H., Gutman,G.A., Crocq,M.-A., Ganguli,R., Nimgaonkar,V., Morris-Rosendahl,D.J. and Gargus,J. TITLE Direct Submission JOURNAL Submitted (29-OCT-1997) Physiology and Biophysics, University of California at Irvine, Irvine, CA 92697, USA REFERENCE 3 (bases 1 to 2521) AUTHORS Chandy,K.G., Fantino,E., Wittekindt,O., Kalman,K., Tong,L.-L., Ho,T.-H., Gutman,G.A., Crocq,M.-A., Ganguli,R., Nimgaonkar,V., Morris-Rosendahl,D.J. and Gargus,J. TITLE Direct Submission JOURNAL Submitted (13-JUL-1998) Physiology and Biophysics, University of California at Irvine, Irvine, CA 92697, USA REMARK Sequence update by submitter COMMENT On Jul 14, 1998 this sequence version replaced gi:2832248. FEATURES Location/Qualifiers source 1..2521 /db_xref="H-InvDB:HIT000063075" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" gene 1..2521 /gene="KCNN3" CDS 287..2482 /gene="KCNN3" /note="hKCa3/KCNN3; polymorphic poly-Gln repeats in N-terminal region" /codon_start=1 /product="calcium-activated potassium channel" /protein_id="AAC26099.1" /translation="MDTSGHFHDSGVGDLDEDPKCPCPSSGDEQQQQQQQQQQQQPPP PAPPAAPQQPLGPSLQPQPPQLQQQQQQQQQQQQQQPPHPLSQLAQLQSQPVHPGLLH SSPTAFRAPPSSNSTAILHPSSRQGSQLNLNDHLLGHSPSSTATSGPGGGSRHRQASP LVHRRDSNPFTEIAMSSCKYSGGVMKPLSRLSASRRNLIEAETEGQPLQLFSPSNPPE IVISSREDNHAHQTLLHHPNATHNHQHAGTAASSTTFPKANKRKNQNIGYKLGHRRAP FEKRKRLSDYALIFGMFGIVVMVIETELSWGLYSKDSMFSLALKCLISLSTIILLGLI IAYHTREAQLFVIDNGADDWRIAMTYERILYISLEMLVCAIHPIPGEYKFFWTARLAF SYTPSRAEADVDIILSIPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKINFNTRFV MKTLMTICPGTVLLVFSISLWIIAAWTVRACERYHDQQDVTSNFLGAMWLISITFLSI GYGDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTK RIKNAAANVLRETWLIYKHTKLLKKIDHAKVRKHQRKFLQAIHQLRSVKMEQRKLSDQ ANTLVDLSKMQNVMYDLITELNDRSEDLEKQIGSLESKLEHLTASFNSLPLLIADTLR QQQQQLLSAIIEARGVSVAVGTTHTPISDSPIGVSSTSFPTPYTSSSSC" repeat_region 374..409 /gene="KCNN3" /rpt_type=tandem /rpt_unit_seq="cag" repeat_region 485..526 /gene="KCNN3" /rpt_type=tandem /rpt_unit_seq="cag" regulatory 2482..2487 /regulatory_class="polyA_signal_sequence" /gene="KCNN3" BASE COUNT 576 a 830 c 624 g 491 t ORIGIN 1 gcctcacacg ctcctagagg accacctcct gagagagttc tttcaccccc tcttctttct 61 ccaagctccc ctcctgctct ccctccctgc ccaatacaat gcattcttga gtggcagcgt 121 ctggactcca ggcagcccca gagaaccgaa gcaagccaaa gagaggactg gagccaagat 181 actggtgggg gagattggat gcctggcttt ctttgaggac atctttggag cgagggtggc 241 tttggggtgg gggcttgtgc tgcagggaat acagccaggc cccaagatgg acacttctgg 301 gcacttccat gactcggggg tgggggactt ggatgaagac cccaagtgcc cctgtccatc 361 ctctggggat gagcagcagc agcagcagca gcagcaacag cagcagcagc caccaccgcc 421 agcgccacca gcagcccccc agcagcccct gggaccctcg ctgcagcctc agcctccgca 481 gcttcagcag cagcagcagc agcagcagca gcagcagcag cagcagccac cgcatcccct 541 gtctcagctc gcccaactcc agagccagcc cgtccaccct ggcctgctgc actcctctcc 601 caccgctttc agagctccac cttcgtccaa ctccaccgcc atcctccacc cttcctccag 661 gcaaggcagc cagctcaatc tcaatgacca cttgcttggc cactctccaa gttccacagc 721 tacaagtggg cctggcggag gcagccggca ccgacaggcc agccccctgg tgcaccggcg 781 ggacagcaac cccttcacgg agatcgccat gagctcctgc aagtatagcg gtggggtcat 841 gaagcccctc agccgcctca gcgcctcccg gaggaacctc atcgaggccg agactgaggg 901 ccaacccctc cagcttttca gccctagcaa ccccccggag atcgtcatct cctcccggga 961 ggacaaccat gcccaccaga ccctgctcca tcaccctaat gccacccaca accaccagca 1021 tgccggcacc gccgccagca gcaccacctt ccccaaagcc aacaagcgga aaaaccagaa 1081 cattggctat aagctgggac acaggagggc cccgtttgaa aagagaaagc gactgagtga 1141 ctatgctctg atttttggga tgtttggaat tgttgttatg gtgatagaga ccgagctctc 1201 ttggggtttg tactcaaagg actccatgtt ttcgttggcc ctgaaatgcc ttatcagtct 1261 gtccaccatc atccttttgg gcttgatcat cgcctaccac acacgtgaag cccagctctt 1321 cgtgatcgac aatggcgcgg atgactggcg gatagccatg acctacgagc gcatcctgta 1381 catcagcctg gagatgctgg tgtgcgccat ccaccccatt cctggcgagt acaagttctt 1441 ctggacggct cgcctggcct tctcctacac accctcccgg gcggaggccg atgtggacat 1501 catcctgtct atccccatgt tcctgcgcct gtacctgatc gcccgagtca tgctgctgca 1561 cagcaagctc ttcaccgatg cctcgtcccg cagcatcggg gccctcaaca agatcaactt 1621 caacacccgc tttgtcatga agacgctcat gaccatctgc cctggcactg tgctgctcgt 1681 gttcagcatc tctctgtgga tcattgctgc ctggaccgtc cgtgcctgtg aaaggtacca 1741 tgaccagcag gacgtaacta gtaactttct gggtgccatg tggctcatct ccatcacatt 1801 cctttccatt ggttatgggg acatggtgcc ccacacatac tgtgggaaag gtgtctgtct 1861 cctcactggc atcatgggtg caggctgcac tgcccttgtg gtggccgtgg tggcccgaaa 1921 gctggaactc accaaagcgg agaagcacgt tcataacttc atgatggaca ctcagctcac 1981 caagcggatc aagaatgctg cagccaatgt ccttcgggaa acatggttaa tctataaaca 2041 cacaaagctg ctaaagaaga ttgaccatgc caaagtgagg aaacaccaga ggaagttcct 2101 ccaagctatc caccagttga ggagcgtcaa gatggaacag aggaagctga gtgaccaagc 2161 caacactctg gtggaccttt ccaagatgca gaatgtcatg tatgacttaa tcacagaact 2221 caatgaccgg agcgaagacc tggagaagca gattggcagc ctggagtcga agctggagca 2281 tctcaccgcc agcttcaact ccctgccgct gctcatcgcc gacaccctgc gccagcagca 2341 gcagcagctc ctgtctgcca tcatcgaggc ccggggtgtc agcgtggcag tgggcaccac 2401 ccacacccca atctccgata gccccattgg ggtcagctcc acctccttcc cgaccccgta 2461 cacaagttca agcagttgct aaataaatct ccccactcca gaagcattaa aaaaaaaaaa 2521 a //