LOCUS AF026402 3237 bp mRNA linear HUM 06-FEB-2002
DEFINITION Homo sapiens U5 snRNP 100 kD protein mRNA, complete cds.
ACCESSION AF026402
VERSION AF026402.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3237)
AUTHORS Teigelkamp,S., Mundt,C., Achsel,T., Will,C.L. and Luhrmann,R.
TITLE The human U5 snRNP-specific 100-kD protein is an RS
domain-containing, putative RNA helicase with significant homology
to the yeast splicing factor Prp28p
JOURNAL RNA 3 (11), 1313-1326 (1997)
PUBMED 9409622
REFERENCE 2 (bases 1 to 3237)
AUTHORS Teigelkamp,S., Mundt,C., Achsel,T., Will,C.L. and Luehrmann,R.
TITLE Direct Submission
JOURNAL Submitted (23-SEP-1997) AG Luehrmann, IMT, Emil Mannkopff Str. 2,
Marburg 35037, Germany
FEATURES Location/Qualifiers
source 1..3237
/db_xref="H-InvDB:HIT000062820"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/cell_line="HeLa"
CDS 40..2502
/note="DEAD-box, RS domain; PRP28p homolog; putative RNA
helicase"
/codon_start=1
/product="U5 snRNP 100 kD protein"
/protein_id="AAB87902.1"
/translation="MAGELADKKDRDASPSKEERKRSRTPDRERDRDRDRKSSPSKDR
KRHRSRDRRRGGSRSRSRSRSKSAERERRHKERERDKERDRNKKDRDRDKDGHRRDKD
RKRSSLSPGRGKDFKSRKDRDSKKDEEDEHGDKKLKAQPLSLEELLAKKKAEEEAEAK
PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERR
ERMERETNGNEDEEGRQKIREEKDKSKELHAIKERYLGGIKKRRRTRHLNDRKFVFEW
DASEETSIDYNPLYKERHQVQLLGRGFIAGIDFKQQKREQSRFYGDLMEKRRTLEEKE
QEEARLRKLRKKEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRS
WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLL
VWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISR
EDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKI
LEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRP
AVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAK
SLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYD
MAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANH
PDAQHKPGTILTKKRREETIFA"
BASE COUNT 895 a 760 c 934 g 648 t
ORIGIN
1 cgacgttgag gccgcgttgg gcggttcaga ctcagggtga tggcaggaga gctggctgac
61 aaaaaggacc gtgatgcatc accttccaag gaggaaagga agcgatcacg gactcctgac
121 agagagcggg atagagaccg ggaccggaag tcttccccat ctaaagatag aaagcggcat
181 cgttcaaggg atagacgtcg aggaggcagc cgttctcgct ctcgttcccg ttccaaatct
241 gcagaaagag aacgacggca caaagaacga gaacgagata aggagcggga tcggaataag
301 aaggaccgag atcgagacaa ggatgggcac agacgggaca aggaccgtaa acgatccagc
361 ttatctcctg gtcgaggaaa agactttaaa tctcggaagg acagagactc taagaaggat
421 gaagaggatg aacatggtga taagaagctt aaggcccagc cattatccct ggaggagctt
481 ctggccaaga aaaaggctga ggaagaagct gaggctaagc ccaagttcct ctctaaagca
541 gaacgagagg ctgaagctct aaagcgacgg cagcaggagg tggaagagcg gcagaggatg
601 cttgaagaag agaggaagaa aaggaaacag ttccaagact tgggcaggaa gatgttggaa
661 gatcctcagg aacgggaacg tcgggaacgc agggagagga tggaacggga gaccaatgga
721 aatgaggatg aggaagggcg gcagaagatc cgggaagaga aggataagag caaggaactg
781 catgccatta aggagcgtta cctgggtggc atcaaaaagc ggcgccgaac gagacatctc
841 aatgaccgga aatttgtttt tgagtgggat gcatctgagg agacatccat tgactacaac
901 cccctgtaca aagaacggca ccaggtgcag ttgttagggc gaggcttcat tgcaggcatt
961 gacttcaagc agcagaagcg agagcagtca cgtttctatg gagacctaat ggagaagagg
1021 cgaaccctgg aagaaaagga gcaggaggag gcaagactcc gcaaacttcg taagaaggaa
1081 gccaagcagc gctgggatga tcgtcattgg tctcagaaaa agttagatga gatgacggac
1141 agggactggc ggatcttccg tgaggactac agcatcacca ccaaaggtgg caagatcccc
1201 aatcccatcc gatcctggaa agactcttct ctgcccccac acatcttgga ggtcattgat
1261 aagtgtggct acaaggaacc aacacctatc cagcgtcagg caattcccat tgggctacag
1321 aatcgtgaca tcattggtgt ggctgagact ggcagtggca agacagcagc cttcctcatc
1381 cctctgctgg tctggatcac cacacttccc aaaattgaca ggatcgaaga gtcagaccaa
1441 ggcccttatg ccatcatcct ggctcccacc cgtgagttgg ctcaacagat tgaggaagag
1501 accatcaagt ttgggaaacc gctaggtatc cgcactgtgg ctgtcattgg tggcatctcc
1561 agagaagacc agggcttcag gctgcgcatg ggttgtgaga ttgtgattgc tacccctggg
1621 cgtttgattg atgtgctgga gaaccgctac ctggtgctga gccgctgtac ctatgtggtt
1681 ctggatgagg cagataggat gattgacatg ggctttgagc cagatgtcca gaagatcctg
1741 gagcacatgc ctgtcagcaa ccagaagcca gacacggatg aggctgagga ccctgagaag
1801 atgctggcca actttgagtc gggaaaacat aagtaccgcc aaacagtcat gttcacggcc
1861 accatgcccc cagcggtgga gcgtctggcc aggagctatc ttcggcgacc tgctgtggtg
1921 tacattggct ccgcaggcaa gccccatgag cgtgtggaac agaaggtctt cctcatgtca
1981 gagtcagaaa agaggaaaaa gctgctggca atcttggagc aaggctttga cccacccatc
2041 attatttttg tcaaccagaa gaagggctgc gacgtgttgg ccaaatccct ggagaagatg
2101 gggtacaatg cttgcacact gcacggtgga aaaggccagg agcagcgaga gtttgcgttg
2161 tccaacctca aggctggggc caaggatatt ttggtggcta cagatgtggc tggtcgtggt
2221 attgacatcc aagatgtgtc tatggttgtc aactatgata tggccaaaaa tattgaagat
2281 tacatccacc gcattggccg cacgggacga gcaggcaaga gtggggtggc catcaccttc
2341 ctcacaaaag aggactctgc tgtgttctac gagctgaagc aagctatcct ggaaagccca
2401 gtgtcttcct gtccccccga actagccaac cacccagatg cccagcataa gccaggcacc
2461 atcctcacca agaagcgccg ggaagagacc atctttgcct gacacagcac tcttcctgtg
2521 ggctgagggc atctccaaag ctggcctgat gcctgttttt cagaaccctc acatccctct
2581 ttccaggtcc tcactcttgg gatatggggg cttaggaaaa caatccaact ccctagccca
2641 gaccctcagg tcaggaggcc tgcgtgtggg gctgcaaaag gagaggacga cgctgtcgga
2701 ggcagggaga gcaaattacc acagcttctt ggcccagttc tgcccttctt tgctttggga
2761 ttgcactggg ccatcagctc atgccaggct atgggggcag ccagttggca ttgctcccca
2821 gactgaacag aaacctggcc gccggatggg acctcctttg gcacagactt gactgtgtaa
2881 ctgcataaac tgcagtagca tcattgccct agatgcccca ggagacctgg caccatgagg
2941 attacagaca gtggaatctt actgtcatct ggacagctgt tttcctgttt ggatggtaaa
3001 ggaagttgag agtctttaga cctgtgcaca gccccgcacc aaggggtgct gtatgctcta
3061 ggcatcccct cccccagggg attttttaag tagatggggg gacacggtga actggctgtg
3121 tccatctttg tcactgagtg aaatctctgt tttctatttt ctgagaagat aagtttgtat
3181 gttctgagaa taaatacatg aatattaaga ctgttaaaaa aaaaaaaaaa aaaaaaa
//