LOCUS AF023449 6110 bp mRNA linear HUM 25-JUL-2016 DEFINITION Homo sapiens CHD2-42 Down syndrome cell adhesion molecule (DSCAM) mRNA, partial cds. ACCESSION AF023449 VERSION AF023449.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 6110) AUTHORS Yamakawa,K., Huot,Y.K., Haendelt,M.A., Hubert,R., Chen,X.N., Lyons,G.E. and Korenberg,J.R. TITLE DSCAM: a novel member of the immunoglobulin superfamily maps in a Down syndrome region and is involved in the development of the nervous system JOURNAL Hum. Mol. Genet. 7 (2), 227-237 (1998) PUBMED 9426258 REFERENCE 2 (bases 1 to 6110) AUTHORS Yamakawa,K., Huo,Y.-K., Haendel,M.A., Hubert,R., Chen,X.-N., Lyons,G.E. and Korenberg,J.R. TITLE Direct Submission JOURNAL Submitted (08-SEP-1997) Medical Genetics, Cedars-Sinai Research Institute, 110 George Burns Road, Davis Building, Suite 2005, Los Angeles, CA 90048-1869, USA FEATURES Location/Qualifiers source 1..6110 /db_xref="H-InvDB:HIT000062707" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="21 (trisomy 21)" /map="21q22, between HMG14 and MX1" /clone="CHD2-42" /tissue_type="brain" /dev_stage="14 weeks, fetal" /note="derived from alternately-spliced mRNA" gene <1..6110 /gene="DSCAM" CDS <1..5691 /gene="DSCAM" /note="member of immunoglobulin superfamily; involved in nervous system development" /codon_start=1 /product="Down syndrome cell adhesion molecule" /protein_id="AAC17966.1" /translation="VFSEDLHSSLYFVNASLQEVVFASTTGTLVPCPAAGIPPVTLRW YLATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFSTLIHDNTYYCTAENPSGKIRSQDV HIKAVLREPYTVRVEDQKTMRGNVAVFKCIIPSSVEAYITVVSWEKDTVSLVSGSRFL ITSTGALYIKDVQNEDGLYNYRCITRHRYTGETRQSNSARLFVSDPANSAPSILDGFD HRKAMAGQRVELPCKALGHPEPDYRWLKDNMPLELSGRFQKTVTGLLIENIRPSDSGS YVCEVSNRYGTAKVIGRLYVKQPLKATISPRKVKSSVGSQVSLSCSVTGTEDQELSWY RNGEILNPGKNVRITGINHENLIMDHMVKSDGGAYQCFVRKDKLSAQDYVQVVLEDGT PKIISAFSEKVVSPAEPVSLMCNVKGTPLPTITWTLDDDPILKGGSHRISQMITSEGN VVSYLNISSSQVRDGGVYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTY IHCRVIGYPYYSIKWYKNSNLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQ PQLSTSQSVHVTVKVPPFIQPFEFPRFSIGQRVFIPCVVVSGDLPITITWQKDGRPIP GSLGVTIDNIDFTSSLRISNLSLMHNGNYTCIARNEAAAVEHQSQLIVRVPPKFVVQP RDQDGIYGKAVILNCSAEGYPVPTIVWKFSKGAGVPQFQPIALNGRIQVLSNGSLLIK HVVEEDSGYYLCKVSNDVGADVSKSMYLTVKIPAMITSYPNTTLATQGQKKEMSCTAH GEKPIIVRWEKEDRIINPEMARYLVSTKEVGEEVISTLQILPTVREDSGFFSCHAINS YGEDRGIIQLTVQEPPDPPEIEIKDVKARTITLRWTMGFDGNSPITGYDIECKNKSDS WDSAQRTKDVSPQLNSATIIDIHPSSTYSIRMYAKNRIGKSEPSNELTITADEAAPDG PPQEVHLEPISSQSIRVTWKAPKKHLQNGIIRGYQIGYREYSTGGNFQFNIISVDTSG DSEVYTLDNLNKFTQYGLVVQACNRAGTGPSSQEIITTTLEDVPSYPPENVQAIATSP ESISISWSTLSKEALNGILQGFRVIYWANLMDGELGEIKNITTTQPSLELDGLEKYTN YSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAASASMVFVSWLPPLKLNGI IRKYTVFCSHPYPTVISEFEASPDSFSYRIPNLSRNRQYSVWVVAVTSAGRGNSSEII TVEPLAKAPARILTFSGTVTTPWMKDIVLPCKAVGDPSPAVKWMKDSNGTPSLVTIDG RRSIFSNGSFIIRTVKAEDSGYYSCIANNNWGSDEIILNLQVQVPPDQPRLTVSKTTS SSITLSWLPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLENLKCGTWYKFT LTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWNDGGCPITS FTLEYRPFGTTVWTTAQRTSLSKSYILYDLQEATWYELQMRVCNSAGCAEKQANFATL NYDGSTIPPLIKSVVQNEEGLTTNEGLKMLVTISCILVGVLLLFVLLLVVRRRRREQR LKRLRDAKSLAEMLMSKNTRTSDTLSKQQQTLRMHIDIPRAQLLIEERDTMETIDDRS TVLLTDADFGEAAKQKSLTVTHTVHYQSVSQATGPLVDVSDARPGTNPTTRRNAKAGP TARNRYASQWTLNRPHPTISAHTLTTDWRLPTPRAAGSVDKESDSYSVSPSQDTDRAR SSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQLTAGTNEYTD SLTSSTPSESGICRFTASPPKPQDGGRVMNMAVPKAIGQVTSYICLHTLEWTFC" BASE COUNT 1621 a 1658 c 1548 g 1283 t ORIGIN 1 gttttcagtg aagacctaca ctccagcctc tactttgtca atgcatctct gcaagaggta 61 gtgtttgcca gcaccacggg gactctggtg ccctgccccg cagcaggcat ccctcctgtg 121 actctcagat ggtacctagc cacgggcgag gagatctacg atgtccccgg gatccgccac 181 gtccacccca acggcactct ccaaattttc cccttccctc cttcaagctt cagtacctta 241 atccatgata atacttatta ttgcacagct gaaaatcctt cagggaaaat tagaagtcag 301 gatgtccaca tcaaggctgt tttacgggag ccctatacag tccgtgtgga ggaccagaaa 361 accatgagag gcaatgttgc ggtcttcaag tgcattatcc cctcctcggt ggaggcgtac 421 atcactgtcg tctcatggga gaaagacact gtttcacttg tctcaggatc tagatttctc 481 atcacatcca cgggagcctt gtatattaaa gatgtacaga atgaagatgg attgtataac 541 taccgctgca tcacgcggca tcgatacacc ggagagacga ggcagagcaa cagcgccaga 601 ctttttgtat cagacccagc gaactcagcc ccatccatac tggatgggtt tgaccatcgc 661 aaagccatgg ctgggcagcg tgtggagctg ccttgcaaag cgctcgggca ccctgagcca 721 gattaccgct ggctgaagga caacatgccc ctggaacttt cagggaggtt ccagaagacc 781 gtgacggggc tgctcattga gaacattcgc ccctcggact caggcagcta tgtttgtgaa 841 gtgtccaaca gatacggaac tgctaaggtg ataggccgcc tgtacgtgaa acagccactg 901 aaagccacca tcagtcccag gaaggttaaa agcagcgtgg gtagccaagt ttccttgtcc 961 tgcagcgtga caggaactga ggaccaggaa ctctcctggt accgcaatgg tgaaatcctc 1021 aaccctggaa aaaatgtgag gatcacaggg atcaaccacg aaaaccttat aatggatcac 1081 atggtcaaaa gtgacggggg cgcataccag tgctttgtgc gcaaggacaa gctgtccgct 1141 caagactatg tgcaggtggt ccttgaagat ggaactccca aaattatttc tgcctttagt 1201 gaaaaggtgg tgagtccagc agagccggtt tcccttatgt gcaacgtgaa gggaacacct 1261 ttgcccacga tcacgtggac cctggacgat gacccgattc tcaagggtgg cagtcaccgc 1321 atcagccaga tgatcacgtc ggaggggaac gtggtcagct acctgaacat ctccagctcc 1381 caggtccggg acgggggagt ctaccgctgc actgccaaca actcggcggg agtcgtcctg 1441 taccaggctc gaataaacgt aagagggcct gcaagcattc gaccaatgaa aaacatcaca 1501 gcaatagcag gacgggacac atacattcac tgtcgtgtga ttggctatcc gtattactcc 1561 attaaatggt acaagaactc taacctgctt cctttcaacc accgccaagt ggcatttgag 1621 aacaatggaa ctcttaaact ttcagatgtg caaaaggaag tggacgaggg ggagtacacg 1681 tgcaacgtgt tggttcaacc acaactctcc accagccaga gcgtccacgt gaccgtgaaa 1741 gttccgcctt tcatacaacc ctttgagttt ccaagattct ccattgggca gcgggtcttc 1801 atcccctgtg ttgtggtctc aggggactta cccatcacga tcacctggca gaaggatggc 1861 cggccaatcc ctgggagcct tggggtgacc attgacaata ttgacttcac gagctccttg 1921 aggatttcca atctctcgct catgcacaat gggaattaca cctgcatagc ccggaatgag 1981 gccgccgctg tggagcacca aagccagttg attgtcagag ttcctcccaa gtttgtggtt 2041 cagccacggg accaggacgg gatttatggc aaagcagtca tcctcaattg ttctgctgag 2101 ggttaccctg tacctaccat cgtgtggaaa ttctctaaag gtgctggggt tccccagttc 2161 cagccaattg ccctaaatgg ccgaatccaa gttctcagca atgggtcgtt gctgatcaag 2221 catgtcgtgg aggaagacag tggctactac ctctgcaagg tcagcaacga tgtgggcgca 2281 gacgtcagca agtccatgta cctcacggtt aaaattcctg cgatgataac atcctatcca 2341 aatactaccc tggccacgca ggggcagaaa aaggagatga gctgcacggc gcatggtgag 2401 aagcccatta tagtccgctg ggagaaggag gaccgaatca ttaaccctga gatggcccgt 2461 tatcttgtgt ccaccaagga ggtgggagaa gaggtgattt ctactctgca gattttgcca 2521 actgtgagag aagattctgg tttcttttcc tgccatgcta ttaattctta tggggaggac 2581 cgtggaataa ttcagctcac agtgcaagag cccccagacc ctcccgaaat tgagatcaaa 2641 gatgtcaaag cacgcacaat tacgctcagg tggaccatgg ggtttgatgg aaacagtccc 2701 atcacaggct acgatattga atgcaaaaat aaatcagact cctgggattc tgctcagaga 2761 accaaagatg tttcccctca gctgaactcg gccaccatca ttgatatcca cccttcctcc 2821 acctacagca tccgcatgta cgccaagaac cggattggca agagcgagcc cagcaacgag 2881 ctcaccatca cggcggacga ggcagctcct gatggtccac ctcaggaagt tcacctggag 2941 cctatatcat ctcagagcat cagggtcaca tggaaggctc ccaagaaaca tttgcaaaat 3001 gggattatcc gtggctacca aataggttac cgagagtaca gcactggggg taacttccaa 3061 ttcaacatta tcagtgtcga caccagcggg gacagtgagg tttacaccct ggacaacctg 3121 aataagttca ctcagtacgg cctggtggtg caggcctgta accgggccgg cacggggcct 3181 tcttctcagg aaatcatcac caccactctc gaggatgtgc ccagttaccc ccccgaaaat 3241 gtccaagcca tagcaacatc accagaaagc atatcaatat cctggtccac actttccaag 3301 gaagccttga atggaattct ccaggggttc agagtcattt actgggccaa cctcatggac 3361 ggagagctgg gtgagattaa aaacatcacc accacacagc cttcactgga gctggacggg 3421 ctggaaaagt acaccaacta cagcatccag gtgctggcct tcacccgcgc aggagacggg 3481 gtcaggagtg agcagatctt cacccggacc aaagaggatg ttccaggtcc tcccgcgggt 3541 gtgaaggcag cggcggcctc agcctccatg gtctttgtgt cctggcttcc ccctctcaag 3601 ctgaacggca tcatccgaaa gtacactgta ttctgctccc acccctatcc cacagtgatc 3661 agcgagtttg aggcctctcc cgactcgttt tcctacagaa ttcccaacct gagtaggaat 3721 cgtcagtaca gcgtctgggt ggtggctgtt acttcagccg gaagaggcaa cagcagtgaa 3781 atcatcacag tcgagccact agcaaaagct cctgcacgaa tcctgacctt cagtgggaca 3841 gtgactactc catggatgaa agacattgtc ttgccttgta aggctgttgg ggacccttct 3901 cctgcagtca aatggatgaa agacagtaac gggacaccca gtctagtaac gattgatggg 3961 cggaggagca tctttagcaa cggaagcttc attattcgca cggtgaaagc agaagactcc 4021 ggctattaca gctgcattgc caataacaac tggggatctg atgaaattat tttaaactta 4081 caagtacaag ttccaccaga tcagcctcgg cttacagtct ccaagaccac gtcttcctcc 4141 atcacccttt cttggctccc tggagacaac gggggcagct ctatcagagg atacatactg 4201 cagtactccg aggacaatag tgagcagtgg gggagttttc caatcagccc cagcgaacgt 4261 tcctatcgct tggaaaatct caaatgtggg acttggtata agttcacact gacagcccaa 4321 aatggagtgg gcccagggcg cataagtgaa atcatagaag caaagacctt aggaaaagag 4381 ccccagttct caaaggagca ggagctgttt gccagcatca acaccacacg cgtgaggctg 4441 aacctcattg gctggaatga tggcggctgc cccatcacct ccttcacact agagtacagg 4501 ccctttggga ccacagtttg gaccacagct cagaggacct ctctctccaa gtcctacatc 4561 ctgtatgacc tgcaggaagc cacctggtat gagctgcaga tgcgggtgtg caacagtgcg 4621 ggctgcgcgg agaagcaggc caacttcgct acgctgaact acgatggcag tacaattcct 4681 ccactcatta agtcagttgt ccaaaacgaa gaagggctga cgaccaacga ggggctcaag 4741 atgctggtga ccatctcctg tatcctggtg ggggtcttgc tgctgtttgt gctcctgctg 4801 gttgtgcgga ggaggcggcg ggagcagagg ctaaagaggc tgcgagatgc aaagagttta 4861 gctgaaatgc tcatgagtaa gaatacccgg acttcagata cgttaagcaa gcaacagcag 4921 accctgcgaa tgcacatcga catacccagg gctcagcttt tgattgaaga gagagacacg 4981 atggagacca ttgatgatcg ctccacggtt ctgttgacgg atgctgactt tggagaggca 5041 gctaagcaga agtccctgac ggtcactcac acggtccatt accaatcggt gtctcaggcc 5101 actgggccct tagtggatgt ttcagacgct cggccgggaa cgaatcccac caccaggagg 5161 aatgccaagg ctgggcccac agcgagaaac cgctatgcca gccagtggac cctcaaccga 5221 ccccacccca ccatctcagc acacaccctc accacagact ggaggctgcc aacacccagg 5281 gctgcaggat cagtagacaa agagagcgac agttacagcg tcagcccctc gcaagacaca 5341 gatcgagcaa gaagcagcat ggtctccaca gaaagtgcct cctccactta cgaagaactg 5401 gccagggcct acgaacacgc caagatggaa gagcaactga ggcacgccaa gttcaccatc 5461 acggagtgct tcatatcaga cacgtcatcg gagcagttga cggcagggac aaatgagtac 5521 acggacagtc tgacctccag caccccttcc gaatcgggaa tctgcaggtt cactgcatct 5581 ccccccaaac ctcaggatgg aggaagagta atgaatatgg cagttccaaa ggcaatcggc 5641 caggtgacct catacatttg cctccatacc ttagaatgga ctttttgtta aaccgaggtg 5701 gtccaggcac cagcagggac ctgagcttag gacaagcatg cttggaacct cagaaaagcc 5761 ggaccctgaa gcgccccacg gtcctggagc ccatcccgat ggaagccgcc tcctccgcct 5821 cctccacgag agaaggacag tcgtggcagc cgggggccgt ggccacatta cctcagcggg 5881 agggagcaga gctgggacag gcagctaaaa tgagcagctc ccaagaatca ctgctcgact 5941 cccggggcca tttgaaagga aacaatcctt acgcaaaatc ttacaccctg gtataacaga 6001 cagcatgact ggacagcggt tgtaaataca attcaaacaa ttcaatcaaa gctacctttt 6061 ttttacggaa ttccaatatt tataattaaa gaaaattgcc aaaatatatt //