LOCUS AF023142 3869 bp mRNA linear HUM 26-JUL-2016
DEFINITION Homo sapiens pre-mRNA splicing SR protein rA4 mRNA, partial cds.
ACCESSION AF023142
VERSION AF023142.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3869)
AUTHORS Tassone,F., Villard,L. and Gardiner,K.
TITLE Sequence, genomic organization and map localization of the human SR
protein gene rA4
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 3869)
AUTHORS Tassone,F., Villard,L. and Gardiner,K.
TITLE Direct Submission
JOURNAL Submitted (11-AUG-1997) Eleanor Roosevelt Institute, 1899 Gaylord
Street, Denver, CO 80206, USA
FEATURES Location/Qualifiers
source 1..3869
/db_xref="H-InvDB:HIT000062700"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="21"
/map="21q22.1; adjacent to SOD1"
CDS <1..3474
/codon_start=1
/product="pre-mRNA splicing SR protein rA4"
/protein_id="AAD09327.1"
/translation="PGQVAAAARTWDAVNAFNQELFSLMDMKPPISRAKMILITKAAI
KAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNI
TATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMAAGTSNAAPVAENVTN
NEGSPPPPVKVSSEPPTQATPNSVPAVPQLPSSDAFAAVAQLFQTTQGQQLQQILQTF
QQPPKPQSPALDNAVMAQVQAITAQLKTTPTQPSEQKAAFPPPEQKTAFDKKLLDRFD
YDDEPEAVEESKKEDTIAVATTAPAAAVPPAPAATVPAAAAPAAASPPPPQAPFGFPG
DGMQQPAYTQHQNMDQFQPRMMGIQQDPMHHQVPLPPNGQMPGFGLLPTPPFPPMAQP
VIPPTPPVQQPFQASFQAQNEPLTQKPHQQEMEVEQPCIQEVKRHMSDNRKSRSRSAS
RSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDREKERERRQKGLPQV
KPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVYRQDA
YRAVQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELCVIYIPCDNVKPEEMES
FYEGGMLDSDTLNPDWKGIPKKPENEVAQNGGAETSHTEPVSPIPKPLPVPVPPIPVP
APITVPPPQVPPHQPGPPVVGALQPPAFTPPLGIPPPGFGPGVPPPPPPPPFLRPGFN
PMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPIPTV
VSGARGNAESGDSVKMYGSTCCTHESAHPSCNPACLPCSLLGTQGVAPGPVIGLQEPS
TGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFAMPPPHG
MKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQPPQQPQQQPQPQAPQQPQQQ
QQQQPPPSQQPPPTQQQPQQFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGNRN
DDRDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEARGK
EKPEVTDRAGGNKTVEPPISQVGNVDTASELEKGVSEAAVLKPSEELPAEATSSVEPE
KDLGSAAEAPR"
exon <1..144
exon 145..189
exon 190..351
exon 352..487
exon 488..630
exon 631..807
exon 808..1098
exon 1099..1266
exon 1267..1352
exon 1353..1543
exon 1544..1644
exon 1645..1758
exon 1759..1915
exon 1916..2239
exon 2240..2326
exon 2327..2518
exon 2519..>3474
BASE COUNT 1097 a 1009 c 856 g 902 t
ORIGIN
1 cccgggcagg tcgccgccgc agcgcgaaca tgggacgccg tcaacgcctt caaccaggag
61 ctcttttcgc ttatggatat gaaacctccc atctctagag ccaagatgat tctcatcact
121 aaagctgcta ttaaagctat taagctttat aagcatgtag ttcaaatagt agaaaagttc
181 atcaaaaagt gtaaaccaga atacaaggtt ccgggattat atgtaattga ctcaattgtg
241 cgacagtctc gtcatcagtt tggaactgat aaagatgttt ttgggccaag attctctaaa
301 aacataactg ccacattcca atatttatat ctttgtccat ctgaagataa gagtaaaata
361 gttcgtgtgc tgaacctttg gcaaaaaaat ggagtgttca aaattgaaat tattcaacct
421 cttttggaca tggcagcggg aaccagtaat gcagccccag tagcagaaaa tgttaccaat
481 aatgaaggct cacctccacc tccagtaaaa gtttcttctg aacctcccac acaagccact
541 ccaaactccg tcccagctgt accacagttg cccagctctg atgcttttgc tgctgtggct
601 cagctgtttc agacaactca aggccaacag cttcagcaga tccttcagac ttttcaacag
661 cctccaaaac cacagtctcc tgcccttgac aatgctgtga tggctcaggt tcaggctatc
721 acagctcagt taaagacaac tcctacacaa ccatctgaac aaaaagctgc tttcccccca
781 cctgaacaga aaactgcatt tgacaagaag ttgcttgata gatttgacta tgatgatgag
841 ccagaagctg tggaagaatc aaagaaagag gataccattg ccgtcgccac gacagcacct
901 gctgccgcag taccccctgc acccgccgcc accgtgcctg ctgctgctgc acccgctgct
961 gcctctcctc ctcctccaca ggcaccattt ggctttcctg gagatggcat gcagcagcca
1021 gcatacacac agcatcaaaa tatggatcag tttcagccac gaatgatggg aatacaacag
1081 gatccaatgc accatcaggt tccacttcct cctaatggac aaatgccagg atttggactt
1141 cttcctacac ctccatttcc tcccatggct cagcctgtga ttcctccaac tccaccagtg
1201 cagcagcctt tccaagcttc ttttcaggca caaaatgaac cacttacaca gaagccgcat
1261 cagcaggaaa tggaagtaga acaaccttgt attcaagagg ttaagcgaca tatgtctgat
1321 aacagaaagt caagatctag gtcagcatcc aggtcaccaa aaaggaggcg atctagatct
1381 ggttctagat ctcgaaggtc tcggcatcga cgttctcgat ctcggtccag ggatagacgc
1441 cgacattctc cccgatctcg atctcaagaa agacgggatc gagaaaaaga gagagaacgt
1501 cgacaaaaag gcctccctca agtgaaaccg gaaactgcaa gtgtttgcag tactaccctc
1561 tgggtggggc agctggacaa aagaactact cagcaggatg ttgccagtct cttggaagag
1621 tttggtccaa ttgaatcaat taatatgatt cctcccaggg gttgtgccta tattgttatg
1681 gtttataggc aagatgcata tcgtgccgtg cagaaactga gccgaggaaa ctataaagtg
1741 aaccagaaat ccataaagat tgcgtgggcc ttaaacaaag gaataaaggc agattataag
1801 cagtattggg atgttgaact ttgtgttatt tatattccat gtgacaatgt taagcctgag
1861 gaaatggaga gtttttatga aggaggaatg ttggacagtg acacacttaa cccagattgg
1921 aaaggaattc ctaagaagcc tgaaaatgaa gttgctcaaa atggaggtgc tgaaacctca
1981 cacacagaac cagtatcacc catacctaaa ccattacctg tgcctgtccc tcctattcct
2041 gttcctgcac ctataacagt gccacctcca caggtcccac cacatcaacc gggtccacct
2101 gtagttggtg ctctccagcc gcctgctttc acgcctcctc tgggaatacc gcctccaggc
2161 tttggtcctg gtgttcctcc tccccctcct cctccaccat ttttgcgccc aggattcaac
2221 ccaatgcatt taccaccagg ttttctgcct cctggacccc cacctcctat aactccacca
2281 gtatccattc ctcctcctca cactccacca ataagcatcc caaactctac tatcgctggt
2341 ataaatgaag acactacaaa agacttatct attggaaatc ccattccaac agtggtgtct
2401 ggggctagag gaaacgccga gtctggtgac agcgtgaaaa tgtatggctc cacctgctgc
2461 acccacgagt ctgcccaccc ctcctgtaac ccagcctgtt tgccgtgctc acttcttggc
2521 actcaaggag ttgcccctgg tcctgtaatt ggacttcagg aaccatctac tggtcttctt
2581 ggcgcccggc ccggtctcat cccactccag cgccctccag gaatgccccc acctcactta
2641 cagcggttcc ctttgatgcc gccccgtccc atgccaccgc acatgatgca cagaggccca
2701 ccgccaggac cagggggctt tgcgatgcct ccacctcatg gaatgaaagg tcccttccca
2761 ccgcatggcc cctttgttag gcctggtgga atgccagggc tcgggggccc agggccaggc
2821 ccagggggtc ctgaagacag agacggaagg caacagccgc cgcagcagcc acagcagcag
2881 ccacagccgc aggcgcccca gcaaccacag cagcagcagc agcagcagcc accaccatca
2941 caacagcctc caccaacaca gcagcagcca cagcagttta gaaatgataa caggcagcag
3001 ttcaattcag gtagagacca agaaaggttt ggaagaagat cttttggaaa tagggtggaa
3061 aatgaccggg aacggtatgg gaaccgtaat gatgatagag ataatagtaa ccgtgacagg
3121 agagagtggg gaaggaggag ccctgaccgg gacaggcaca gagacttgga agagagaaat
3181 agacgctcta gtgggcatcg agacagagag agagattcta gagatagaga gtctcgtaga
3241 gagaaggaag aagcccgagg aaaggaaaag cctgaggtga cagacagggc aggtggtaac
3301 aaaaccgttg aacctcccat tagccaagtg ggaaatgtag acactgcttc agaacttgag
3361 aagggggtgt ctgaggctgc agtcctaaag ccttctgaag agttacctgc tgaggctacc
3421 tcatccgttg aacccgaaaa ggatttaggt tcagcagcag aggctcctcg ttagnnnaat
3481 ttgtgaaaat gtgacagtga caattcctgg agtgtagagc tagaggtgta cagatgctat
3541 attatatccg ctcccggtgt actgcagccc cgcgccagct ggtggggaac tgtaagcaat
3601 ttgattgctt cccttgtatt taaaaatagc cacaaaataa caaaaaatac tgnaaatatg
3661 nataaatatt accctttttg ctgtaacttt ttaaaagttt tgactttaaa aagtttacaa
3721 attgtaatta gaagtgctct ctattttttt tttttttttt aatttaagac aaggtaacgg
3781 tgaaagctcc tcaaaacaat agggatgttt ttaataaact ctattttcgt aacaaacttt
3841 aatgtgtgct attcttccta cactgcatt
//