LOCUS AH005613 3625 bp DNA linear HUM 10-JUN-2016
DEFINITION Homo sapiens chromosome 11 ARIX homeodomain protein (ARIX) gene,
complete cds.
ACCESSION AH005613 AF022722 AF022723 AF022724
VERSION AH005613.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3625)
AUTHORS Johnson,K.R., Smith,L., Johnson,D.K., Rhodes,J., Rinchik,E.M.,
Thayer,M. and Lewis,E.J.
TITLE Mapping of the ARIX homeodomain gene to mouse chromosome 7 and
human chromosome 11q13
JOURNAL Genomics 33 (3), 527-531 (1996)
PUBMED 8661014
REFERENCE 2 (bases 1 to 3625)
AUTHORS Browne,D.L., Lewis,E.J. and Rhodes,J.
TITLE Direct Submission
JOURNAL Submitted (04-SEP-1997) Biochemistry, Oregon Health Sci. U., 3181
SW Sam Jackson Park Rd., Portland, OR 97224, USA
COMMENT On or before Jun 10, 2016 this sequence version replaced
AF022722.1, AF022723.1, AF022724.1, AH005613.1.
FEATURES Location/Qualifiers
source 1..3625
/organism="Homo sapiens"
/mol_type="genomic DNA"
/db_xref="taxon:9606"
/chromosome="11"
/map="11p15.5"
gene 1..3625
/gene="ARIX"
regulatory 458..463
/regulatory_class="TATA_box"
/gene="ARIX"
mRNA join(488..875,1613..1800,2260..>2709)
/gene="ARIX"
/product="ARIX homeodomain protein"
exon 488..875
/gene="ARIX"
/number=1
5'UTR 488..658
/gene="ARIX"
CDS join(659..875,1613..1800,2260..2709)
/gene="ARIX"
/codon_start=1
/product="ARIX homeodomain protein"
/protein_id="AAB82744.1"
/translation="MDYSYLNSYDSCVAAMEASAYGDFGACSQPGGFQYSPLRPAFPA
AGPPCPALGSSNCALGALRDHQPAPYSAVPYNFFPEPSGLHEKRKQRRIRTTFTSAQL
KELERVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKFRKQERAASAKGAAGA
AGAKKGEARCSSEDDDSKESTCSPTPDSTASLPPPPAPGLASPRLSPSPLPVALGSGP
GPGPGPQPLKGALWAGVAGGGGGGPGAGAAELLKAWQPAESGPGPFSGVLSSFHRKPG
PALKTNLF"
gap 1335..1434
/estimated_length=unknown
exon 1613..1800
/gene="ARIX"
/number=2
gap 1945..2044
/estimated_length=unknown
exon 2260..2709
/gene="ARIX"
/number=3
BASE COUNT 613 a 1224 c 973 g 610 t
ORIGIN
1 catcccaggt tccgtctctt cccggtctcc atcccctttc ctgggccgct tccgcagtct
61 tccgccggga tgggacttcg ctgggggcgg ggntgagggg ccagatcgga ataactcggt
121 tatcagagcg aattgaatta acttcttcac acgagcgccg ccaggcctgc ctcccctccc
181 ttccgcgggg ccgcaggtgg ggaggcccgg gaaaagggtc gggaccctct ggcctcggac
241 gctgtgtaga gaccgaaggt ctggtccgga ttggggcagg atagggactc cggggatagg
301 gtcccgcgca tcccagctcc acacctctga gccctaagac ggcggcgggg acccttcggg
361 gtgggggtcg gggcggcttt gggcggtgtc tgggcctcct aggccccgcc ccttcggagc
421 tcgccccgcc ccgcccccct ccgcggggtc ctgcgcgtta aaaggcgcgc gggccgggct
481 ggctgcactt gcgttgcacc cgggctgagt gcggccgcga cggggcgggc ggactctcgg
541 gcgctcagag ctggcctcgg gtcctcggag cctggcgctc gaacctccct tccgacctcc
601 acccggaccc cgaccccgac ccggcctggc ccggcccccg cccccgcccc ccgggccgat
661 ggactactcc tacctcaatt cgtacgactc gtgcgtggcg gccatggagg cgtccgccta
721 cggcgacttt ggcgcctgca gccagcccgg cggcttccaa tacagccccc tgcggcccgc
781 tttccccgcg gcagggccgc cctgccccgc gctcggctcc tccaactgcg cacttggcgc
841 cctacgcgac caccagcccg cgccctactc ggcaggtgag cgcagccccg gcccaaccct
901 ccctccaatt cctgcagaat ccctgggccc gctcgccaag tgaatgggac tgtccccttc
961 agccgccccc attcctgcct tggccagacc gtccaatgcc ccgagagacc cccagaatac
1021 gaggttctcc tccgcaggaa tgagcctcac cctctcatct ctcctgttcc tttttctcgt
1081 tgccaaatct ctgtctcgtg cccttcaggt caaggaaata tatccccatc cagctctggg
1141 ccccttacca ggccttcccc tcaccacctg caaagactga ccactaaacc tctacaagcg
1201 ctggatcttt gaaaaaggct cccagcccag ccctatcacc acttatcacc ccaccccatc
1261 accgctgccc cacgagatgc atgaccccca gcaaggacct ctccaggcag ctgagctgcc
1321 cagacgggaa gcttnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
1381 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnttccat
1441 tgagtaatag ggaggacggt cggccccagg gtgccgggac caagaggagg gatcaggcca
1501 gggagggggg aggggtgtga ttcccccgga gctggacaca acgggttgaa ttttgtttgt
1561 aattccccca tcgtttttgc cccccccccg gcccccatgg acacacccgc agtgccatac
1621 aatttcttcc cagagccatc cggcctgcac gagaagcgca agcagcggcg catccgcacc
1681 acgttcacca gcgcgcagct caaggagctg gagcgcgttt tcgctgagac ccactacccc
1741 gacatttaca cgcgtgagga gctggcgctc aagatcgacc tcactgaggc tcgcgtgcag
1801 gtgcgtgtat gcacgtgtgt gttcgaaaat gcgcatggaa ggaggtgtgg gagcttaatg
1861 tctaacacct gggggtaggg gaatacaggc aaatgcaacc cgaaggcagg gcgcggtccc
1921 agggtgcttg ggcagctacc ggagnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
1981 nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn
2041 nnnnggatcc caagggcaag aaccagggga tctggaggca ggggccagtg gaagcgcgga
2101 atgcaacggg ctgcgtgcgg agggccgaaa gcccctccaa ctagtaagaa ccgggcccgg
2161 ttctttccga accaggatct cactcgagcc ttgcggccgc gggctgaccc cgtgcgttct
2221 ccgaccctcg tccaggctga ctggcccctg tgcccgcagg tctggttcca gaaccgccgg
2281 gccaagttcc gcaaacagga gcgcgcggcc agcgccaaag gcgcggcggg cgcggcgggc
2341 gccaaaaaag gcgaagcgcg ctgctcctcc gaagacgacg attccaagga gtccacgtgc
2401 agccccacgc ccgatagcac cgcctcgctg ccgccgccgc ctgcgcccgg cctggccagc
2461 ccgcgcctga gccccagccc gctgcccgtc gcactgggct ccgggccggg acctgggccg
2521 gggccacagc cgctcaaggg cgcactgtgg gccggtgtgg cgggcggtgg gggcggcggg
2581 cctggcgcgg gagcggccga actacttaag gcttggcagc cggcggagtc cggccccggg
2641 cctttctccg gggttctgtc ttcctttcac cggaagcccg gccccgccct gaagaccaat
2701 cttttctagc tgccggcctc tggaggctcc gagcctgccc ccagaaactc cctgcccctc
2761 caggacctga cagcccctcc catcctggcc acccgcctgg aagtccccat ccgtctccac
2821 tccctactgt ctcacccctc ggtgtgtcct ccccaacttt ggagaccaag tcagggccac
2881 tctcgtcctc acccaccctc taccagcaga gcggagttct ttataccggg acctcctcca
2941 ggagaacccc ggagctcctt ctagcttggc cttctttgga tgcggtatca catgaggcct
3001 gtccctaaca gtgccctcaa agtgaaggtc ctcaaggagg atcggcacag cccccttccc
3061 tggctctgca gcggctgggt caccccttac gctggtgatc aggaaagccc gctgccccac
3121 ccctcgggcc cacccgtaca gaggctggtg gtcgccggga taattaatga ccaccgccaa
3181 ttcatccctc acgtgtctcc tctcttccct agcccgtctg gcacagaggg tggacctgtt
3241 anaggagtgg aggggctgcc tggggaatgg gacagaggga ttctctttcc ctaatttttt
3301 tggttgtcct ttttctttga aaaacttgta atttattgaa gttttactca atccaaataa
3361 aacttaattt attgaagaca tcacgccgca acccttacga ctgcccagga agctgcttgc
3421 aagaacctgt cccgggctga gacctgcgaa gaactccctc ccccaccctg ccgccgtgca
3481 tccccananc agggcagcac agacaagaga cagtgaaaac taacaaactg gcactttatg
3541 gctgaaatcc tgcccccccc aaccaacccc aataatatta aggtgctctc ctcccaaacc
3601 acacaaaaca ntttaaataa accca
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